GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:48:35

Sequence gi568815595f:150452354_150683908 : 231555 bp : 38.90% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4723   4774   52  1  1   66  115    49 0.845   3.39
 1.02 Term +   6023   6283  261  1  0  110   42   178 0.994   9.94
 1.03 PlyA +   7138   7143    6                               1.05

 2.00 Prom +  17113  17152   40                              -8.25
 2.01 Init +  17467  17651  185  0  2   51   27   170 0.133   5.84
 2.02 Term +  43704  43824  121  0  1  100   43   113 0.089   4.97
 2.03 PlyA +  43861  43866    6                               1.05

 3.03 PlyA -  44555  44550    6                               1.05
 3.02 Term -  49018  48783  236  2  2   44   49   202 0.367   7.40
 3.01 Init -  49519  49081  439  1  1   48   28   277 0.358  14.02
 3.00 Prom -  54606  54567   40                              -3.85

 4.00 Prom +  57425  57464   40                              -5.75
 4.01 Init +  59241  59293   53  2  2  106   94    38 0.566   6.88
 4.02 Intr +  81798  82132  335  0  2  -18   52   265 0.006   6.59
 4.03 Intr +  93454  93950  497  2  2   38   25   388 0.000  19.28
 4.04 Intr +  94338  94477  140  2  2  -18  109   135 0.002   3.34
 4.05 Intr + 103584 103636   53  0  2   62   90    23 0.002  -2.47
 4.06 Intr + 106035 106069   35  1  2  126   55    24 0.296  -0.08
 4.07 Intr + 115549 115693  145  0  1   76   95    99 0.850   8.33
 4.08 Intr + 115733 115939  207  0  0   71   83    61 0.449   2.03
 4.09 Intr + 119605 120176  572  2  2   67  111   313 0.987  23.05
 4.10 Intr + 123296 123409  114  1  0   51   68   107 0.953   4.72
 4.11 Intr + 129265 129393  129  0  0   50  100    79 0.906   5.27
 4.12 Intr + 130847 130912   66  1  0   87   80    91 0.973   6.38
 4.13 Intr + 135711 135785   75  2  0   72  103    39 0.519   2.59
 4.14 Term + 135825 135992  168  2  0   55   48   155 0.565   5.10
 4.15 PlyA + 136012 136017    6                              -0.45

 5.00 Prom + 136402 136441   40                              -5.15
 5.01 Init + 151010 151146  137  1  2   51   97   235 0.946  18.38
 5.02 Intr + 159440 159609  170  2  2   64    6   175 0.033   5.57
 5.03 Term + 163169 164385 1217  0  2   66   37   264 0.122   9.90
 5.04 PlyA + 165226 165231    6                               1.05

 6.00 Prom + 169204 169243   40                              -5.55
 6.01 Init + 170069 170142   74  1  2   48   82   114 0.991   7.39
 6.02 Intr + 170690 170816  127  2  1  100   95    40 0.968   5.66
 6.03 Intr + 186416 186566  151  1  1  -16   76   175 0.208   4.71
 6.04 Term + 200964 201013   50  1  2  110   41    32 0.057  -2.81
 6.05 PlyA + 201439 201444    6                               1.05

 7.08 PlyA - 201452 201447    6                               1.05
 7.07 Term - 207957 207883   75  0  0   68   42    89 0.210  -0.84
 7.06 Intr - 214662 214434  229  2  1   77  100    94 0.604   6.45
 7.05 Intr - 217142 216943  200  2  2    9  107   116 0.380   2.83
 7.04 Intr - 226201 226056  146  2  2   82   90    92 0.861   7.88
 7.03 Intr - 228185 228115   71  1  2   85  101    25 0.950   1.41
 7.02 Intr - 228577 228420  158  1  2   77   87   152 0.995  11.89
 7.01 Intr - 229963 229865   99  1  0   87  103    88 0.601   9.59

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  81904  82132  229  0  1   34   52   222 0.950  11.78
S.002 Term +  85408  85535  128  2  2   78   43    85 0.846   0.46


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:150452354_150683908|GENSCAN_predicted_peptide_1|104_aa
XASGGGVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSL
SSNDQLSQLPTQQANPGSTSQQQAVIAQPPQPTQPPQQPNVSSA

>gi568815595f:150452354_150683908|GENSCAN_predicted_CDS_1|315_bp
nntgcatctgggggaggtgttgtagccattgacaacaaaatagaacaagcaatggatctg
gtgaaaagccatttgatgtatgcagtaagagaagaagtggaagttttaaaggaacaaata
aaagaattagttgaaagaaactctttacttgaacgagaaaatgcactgttaaaatctctt
tcaagcaatgatcaattatcccaactcccaacccaacaggccaatcctggtagcacttct
caacagcaagcagtgatagcacagcctccgcagccaacgcaacctccacagcagccgaat
gtctcctcagcataa

>gi568815595f:150452354_150683908|GENSCAN_predicted_peptide_2|101_aa
MAVMTADSSGNAAFLEASSAQIITLWEGKKVTTIFYPRILKNVIPQKGVLRGGGECQPQE
GSKKLPPSSPLAPPTPDAFTVFSVDSKFGTEKLTALKVLLL

>gi568815595f:150452354_150683908|GENSCAN_predicted_CDS_2|306_bp
atggctgtgatgacagctgactcatctggtaatgcagctttcctggaggcttcctctgct
cagataatcacactctgggagggaaaaaaggttacaacaatcttctaccccaggatactc
aagaatgtcatcccccagaagggagttctacgaggaggaggagaatgtcagccccaggag
gggagcaaaaagctgccgccctccagtcccctggctccccccactccagatgcattcaca
gtttttagtgtagattccaaatttggaactgaaaaactcacagccttgaaagtcctacta
ttgtag

>gi568815595f:150452354_150683908|GENSCAN_predicted_peptide_3|224_aa
MDNEVQAEVFSDGDEELVGNWSKGYSCYALAKRLVAFCPCLRDLWNFELEGDDLGYLVKE
ISKWQSVQKEAEDNSLEILQPNEAVEKENPFSGEKFKPAAEICISNEELNVNHQDNGENV
SGHVRELHNSPSHHRPRVPGGKDGFVAMAKRGQGTAWTTASQGASPKPGQLPHDIEPVGA
EMSRIEIWEPPPRFQRMYGNTWMSKQKFAGEGEALMENLLENLC

>gi568815595f:150452354_150683908|GENSCAN_predicted_CDS_3|675_bp
atggacaatgaagtccaggctgaggtgttctcagatggagatgaggaacttgttgggaac
tggagtaaaggttactcttgctatgctttagcaaagagactggtggcattttgcccctgc
cttagagatctgtggaactttgaacttgagggagatgatttagggtatctggtgaaagaa
atttctaagtggcaaagcgttcaaaaggaagcagaggacaatagtttggaaattttgcaa
cccaatgaagcagtagaaaaggaaaaccccttttctggggagaaattcaagccagctgca
gaaatttgcataagtaatgaggagctgaatgttaatcaccaagacaatggggaaaatgtc
tcagggcatgtcagagaacttcacaacagcccctcccatcacaggcccagagtcccagga
gggaaagatggttttgtggccatggctaaaagaggccaaggcacagcttggaccactgct
tcacagggtgcaagccccaagcctgggcagcttccacatgatattgagcctgtgggtgca
gagatgtcaagaattgagatttgggaacctccacctagatttcagaggatgtatggaaac
acctggatgtccaagcagaagtttgctggcgagggggaagccctcatggagaacctcttg
gagaacctctgctag

>gi568815595f:150452354_150683908|GENSCAN_predicted_peptide_4|862_aa
MDNPGGLYVKQNKSGTERWGKKEIEFVTKQLSTKKSLGPDGFIGEFYKTYKEFMPILHKL
FQETEENNSRLILRSQYYPDNKTYTTRNENYTKISYEHKCKNSTEILANQNLYLKKGIFK
KLTTNIILHDAEKPLGPQAPTPARRSPAPSPHRSPLPFPSPHSLAVRRLGPLPLHGTSPR
SAGSGRKRDAAPGTRTQLRLRNAEGRPLFPYRGLGDVAALGDVLAVLLVGHTDPLLGDHL
RGATTCPGHPSDSLTRLPPLEPLRGSARGARAAGAPRFSGQTLATAAGPGRRKREADGSG
NTNSLSPRMRRRVGAGFGPGELSPERFLFPGQHGAVHAALDRKAVWNICTSEQSVVWRQG
NLGRIAKSVSLVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKV
VNLGYIPMCITEESMPICVLNLIKVFTVIATAVLVIASTDVDKTGASYYGEQTLHYIATN
GESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKATIFNLKCDPVFDFGTGPRNAAYY
SPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDSTYFAWCPDGEHILTATCAPRLR
VNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGIFPAKTITYQAVPSEVPNEEPKV
ATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPLSKTALKNQRKHEAKKAAKQEAR
SDKSPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNLKKKLKAIEQLKEQAATGKQLEK
NQLSMERYNPLIVIDLLTVCNPCVRSVGQLSPVESMRLSGRRGHGGSCEELLTPKPCPEC
RADCLLTVGLVTDKCPVSVVVG

>gi568815595f:150452354_150683908|GENSCAN_predicted_CDS_4|2589_bp
atggataaccctggagggctttatgttaagcaaaataagtcaggcacagaaaggtgggga
aaaaaagaaattgaatttgtaacaaaacaactatccacaaagaaaagcctaggcccagat
ggctttattggtgaattctacaaaacatacaaagaattcatgccaattcttcacaagctt
ttccaggaaaccgaagagaacaactcccgacttattctacgaagccagtattaccctgat
aacaaaacctacacaacaagaaatgaaaactacaccaagatctcttacgaacataaatgt
aaaaattctacagagatactagcaaaccaaaatctctacctgaaaaagggcatcttcaaa
aaactcacaactaacatcatacttcatgatgcagagaaaccactcggaccccaggctccc
acgcctgcacgccggtcgccggccccctcacctcacaggtctccccttccgttcccgagc
ccccacagtctggcggttcgcagactcgggcccctacccctccacggcaccagcccacgg
tcggccggatccgggagaaaacgcgacgcggccccagggacccggactcagctccggctg
cggaacgcagaggggcgcccgctctttccttaccgaggtcttggcgacgttgccgcgctg
ggtgatgttcttgctgtgcttctcgttggccatacggatcctttgcttggcgaccatctt
cgcggcgccaccacctgccccggccacccctcggactcgctcactcgcctgcctcctctg
gagccgctgcgaggctcggctcgtggtgcccgcgccgccggagcgccgaggttctcaggc
cagacgctagctacggccgctgggcctgggcgccgcaagcgcgaggctgatggctccgga
aacaccaattcgctgtctccacgcatgaggagacgtgtaggggccgggttcggccctggt
gaactctcacccgagcggtttctctttccgggacaacatggcgccgtccacgccgctctt
gacagaaaggctgtatggaacatttgtacttcagaacagtctgttgtgtggagacagggg
aatctgggaagaattgcaaagtctgtatctttagtggctgtctatgttccaggaagtaaa
ggtgcaccttcatttgttagattatatcagtaccccaactttgctggacctcatgcagct
ttagctaataaaagtttctttaaggcagataaagttacaatgctgtggaataaaaaagtt
gttaatttaggctatattcctatgtgtataacagaagaatcaatgcccatttgtgtttta
aatctaattaaagtttttactgttatagctactgctgtgttggtaatagctagcacagat
gttgacaagacaggagcttcctactatggagaacaaactctacactacattgcaacaaat
ggagaaagtgctgtagtgcaattaccaaaaaatggccccatttatgatgtagtttggaat
tctagttctactgagttttgtgctgtatatggttttatgcctgccaaagcgacaattttc
aacttgaaatgtgatcctgtatttgactttggaactggtcctcgtaatgcagcctactat
agccctcatggacatatattagtattagctggatttggaaatctgaggggacaaatggaa
gtgtgggatgtgaaaaactacaaacttatttctaaaccggtggcttctgattctacatat
tttgcttggtgcccggatggtgagcatattttaacagctacatgtgctcccaggttacgg
gttaataatggatacaaaatttggcattatactggctctatcttgcacaagtatgatgtg
ccatcaaatgcagaattatggcaggtttcttggcagccatttttggatggaatatttcca
gcaaaaacaataacttaccaagcagttccaagtgaagtacccaatgaggaacctaaagtt
gcaacagcttatagacccccagctttaagaaataaaccaatcaccaattccaaattgcat
gaagaggaaccacctcagaatatgaaaccacaatcaggaaacgataagccattatcaaaa
acagctcttaaaaatcaaaggaagcatgaagctaagaaagctgcaaagcaggaagcaaga
agtgacaagagtccagatttggcacctactcctgccccacagagcacaccacgaaacact
gtctctcagtcaatttctggggaccctgagatagacaaaaaaatcaagaacctaaagaag
aaactgaaagcaatcgaacaactgaaagaacaagcagcaactggaaaacagctagaaaaa
aatcagctctctatggaaagatacaatccattaatagtcatagacctgctgactgtctgt
aacccctgcgtcagatcagtgggacagcttagccctgtagagtcgatgaggttaagtggc
aggcgtggacacggcggcagttgtgaagagctgcttacaccaaagccttgcccggaatgc
agggctgattgcctgctcacagttggtcttgtgactgacaagtgtcctgttagtgtcgtt
gtaggatga

>gi568815595f:150452354_150683908|GENSCAN_predicted_peptide_5|507_aa
MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQICPDFPDEALATTAAT
AAAASPLPRREAVHVSELRGTGADRNPHSPGRSVGGSSLCTPTPVVSDFLYTNNRQTESQ
IMSELPFTIASKRIKYLGIQLTRDVKNLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINI
VKMAILPKVIYRFNAIPIKLPMPFFTELEKTTLKFIWNQKRARITKSILSQKNKAGGITL
PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEMMPHIYNYLIFDKPEKNKQWGKDSLF
NKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNIRPKTIKTLEENLGITIQDIGMGK
DFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFTTYSSDKGLISR
IYNELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYVAKKHMKKCLPSLAIREMQIKTTMRY
HLTPVRMAVIKKSEIHCHLNKVGLCQY

>gi568815595f:150452354_150683908|GENSCAN_predicted_CDS_5|1524_bp
atgaggcttctgctgcttctcctagtggcggcgtctgcgatggtccggagcgaggcctcg
gccaatctgggcggcgtgcccagcaagagattaaagatgcagtacgccacggggccgctg
ctcaagttccagatttgccccgatttcccggacgaggcactggcgaccacagcggccact
gcggctgccgcctccccactgcccaggcgtgaagccgttcatgtctccgagctccggggt
accggcgctgacagaaatccccactctcctggccgctccgtcggcggcagttcactctgc
acaccaacacctgttgtttcagatttcctatacaccaacaacagacaaacagagagccaa
atcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaa
cttacaagggatgtgaagaacctcttcaaggagaactacaaaccactgctcaaggaaata
aaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaataaatatc
gtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagcta
ccaatgcctttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaa
agagcccgcatcaccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactg
cctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaa
aacagagatatagatcaatggaacagaacagagccctcagaaatgatgccgcatatctac
aactatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctattt
aataaatggtgctgggaaaattggctagccatatgtagaaagctgaaactggatcccttc
cttacaccttatacaaaaatcaattcaagatggattaaagacttaaacattagacctaaa
accataaaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaag
gacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggat
ctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaa
cctacaaaatgggagaaaattttcacaacctactcatctgacaaagggctaatatccaga
atctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgg
gcaaaggacatgaacagacacttctcaaaagaagacatttatgtagccaaaaaacacatg
aaaaaatgcttaccatcactggccatcagagaaatgcaaatcaaaaccacaatgagatac
catctcacaccagttagaatggcagtcattaaaaagtcagaaattcattgtcatttaaat
aaagtgggcctgtgtcaatattaa

>gi568815595f:150452354_150683908|GENSCAN_predicted_peptide_6|133_aa
MRVISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIW
QWGQENKKIIELEGCGNPRFMSDWSKVWVVQDLQLVSEVVTDLWNRTLNLWDLTLTPEVI
VASFSTWSRTGFA

>gi568815595f:150452354_150683908|GENSCAN_predicted_CDS_6|402_bp
atgcgggttattagccagcggtacccagacatccgcattgaaggagagaattacctccct
caaccaatatatagacacatagcatctttcctgtcagtcttcaaactagtattaataggc
ttaataattgttggcaaggatccttttgctttctttggcatgcaagctcctagcatctgg
cagtggggccaagaaaataagaaaattattgaacttgagggttgtgggaacccccgattt
atgtctgattggtcaaaagtatgggtggtccaggacctgcaactggtgtctgaagtggta
acagacttgtggaaccgaacacttaacttgtgggatctgacactaactccagaggtcatt
gtggcctccttcagtacttggtcaaggacaggatttgcctga

>gi568815595f:150452354_150683908|GENSCAN_predicted_peptide_7|325_aa
DEEEETSPKCEFCGSDLRAFFSNVDVSSEPKGHASCCIAFQNLIDYIYEEQIKTKPPKAE
LIAIDPHAAHGSEVDRLKAKEKALQRKQEQRMARHFAIISREQTHFSEDDSKRLKTISYQ
LSVDIPEKQIIDDIVFDFQLRNSNMSIICCDSRIACGKSRSIRTIYMTLSDLSYPSGNLA
IIRVPNKVNGFTCIVQEDMPTNPAILAVLDSSGRSSCYHPNGNVWVYINILGGQYSDQAG
NRIRAWNWSNSITSSPFVSFKPVFLALNRYIGVRILEQDKISITFLAMGQQARISVGTKV
KSRITPPPLLTDELEWTLIRESNPT

>gi568815595f:150452354_150683908|GENSCAN_predicted_CDS_7|978_bp
gatgaagaggaggagacatcacccaaatgtgaattttgtggcagcgatctaagagcattt
ttttctaatgtggatgtttcctctgaaccaaaagggcatgcctcctgttgtattgctttc
caaaatctgattgactatatctatgaggagcaaataaaaaccaaaccccctaaagctgaa
ttaattgctattgaccctcatgcagcccatggtagtgaggtcgacagactcaaggcaaaa
gaaaaagccctgcaaaggaaacaggagcaacgaatggccagacattttgcaataatatca
agggaacagactcatttctctgaagatgattcaaagcgcttaaaaacaatttcttatcaa
ctttctgtggatattccagaaaaacagataattgatgacattgtatttgattttcaacta
agaaacagtaacatgtctatcatttgttgtgattctcggatagcatgtggaaagtcaagg
agcattagaacaatttatatgaccttatctgatctcagctatccatctggaaacctagcc
atcattcgagtgcccaacaaggtaaatggttttacttgtatagtccaagaagatatgccc
actaaccctgctatcctagcagtgctggattcctctggcagaagttcctgctatcatccc
aatggaaatgtctgggtatacatcaatatcttgggaggtcaatattcagatcaagccggc
aacagaataagggcttggaattggtcaaattccatcacttcctcaccctttgtttcattt
aaacctgtctttctggctttgaaccgttatattggagtccgcatcttagaacaagacaag
atttctataacttttctagcaatgggccaacaggcaagaatcagtgttggaaccaaagtg
aagagtagaataacaccaccgcccctgcttacggatgaattagagtggaccctcatcagg
gaatccaaccccacataa