GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:50:34

Sequence gi568815587r:11251947_11453119 : 201173 bp : 46.54% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.12 PlyA -   3663   3658    6                               1.05
 1.11 Term -  19344  19198  147  0  0  108   46   261 0.985  21.80
 1.10 Intr -  29685  29338  348  0  0  113    3   154 0.032   4.95
 1.09 Intr -  41247  41083  165  0  0  112   92   349 0.999  37.86
 1.08 Intr -  51771  51686   86  1  2   59   70    67 0.208   1.54
 1.07 Intr -  52143  51979  165  1  0  128   49     0 0.094   0.03
 1.06 Intr -  63465  63429   37  0  1  101  111   -19 0.021  -0.46
 1.05 Intr -  75235  75140   96  1  0   50  109    53 0.469   3.81
 1.04 Intr -  79289  79191   99  2  0   91   65    63 0.901   4.61
 1.03 Intr -  80885  80748  138  2  0   79   79   261 0.999  24.96
 1.02 Intr -  89058  88873  186  0  0  109   75   170 0.880  17.69
 1.01 Init -  92481  92437   45  0  0   56   97   -15 0.212  -3.12
 1.00 Prom -  94954  94915   40                              -8.86

 2.02 PlyA -  95556  95551    6                               1.05
 2.01 Sngl - 101173  99998 1176  1  0   62   43  1023 0.975  91.22
 2.00 Prom - 113535 113496   40                              -3.86

 3.10 PlyA - 116131 116126    6                               1.05
 3.09 Term - 119366 119274   93  2  0   90   48    27 0.351  -3.27
 3.08 Intr - 120683 120569  115  1  1  116   96   277 0.999  31.75
 3.07 Intr - 125433 125236  198  2  0   98  103   321 0.999  33.07
 3.06 Intr - 127318 127135  184  2  1   79  119   252 0.707  26.25
 3.05 Intr - 132620 132577   44  1  2   42  105    65 0.538   1.48
 3.04 Intr - 162176 162006  171  1  0   25   97   123 0.068   5.96
 3.03 Intr - 173337 173172  166  1  1   63   82    31 0.002  -0.98
 3.02 Intr - 180841 180675  167  0  2   93  113   255 0.679  28.10
 3.01 Intr - 196990 196798  193  2  1  127   80   281 0.702  29.75

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:11251947_11453119|GENSCAN_predicted_peptide_1|503_aa
MVLVQGTRQDHTAHQVWQCGGSVEVLPCSRIAHIERAHKPYTEDLTAHVRRNALRVAEVW
MDEFKSHVYMAWNIPQEDSGIDIGDITARKALRKQLQCKTFRWYLVSVYPEMRMYSDIIA
YGVAGAIHISANTSASAAQVVPESPDPVVPMETHCTLQNSLKTDLCLDQGPDTENVPIMY
ICHGMTPQSSGTCYSVCLLIGFKFLGEVYLALCNSSILTDGQGGRVPEHRPFGPSPGQSH
LQRKWVTVSQAAPPRGTSGVIMAAALKGGLSDVESPEGSGAPSLNVYYTSSQQIHVGILS
PTVDDDDNRCLVDVNSRPRLIECSYAKAKRMKLHWQFSQTLARCPLKGKQRKGCGVFCAG
RVSPRVGCLGSAQHLAVGKAWAGPKDELSSQNLQLSGQRHLVRARLLCALVTAPTLILRS
VRFIADKRIPISPLAHPSRNQDRNDHLGLQTMKPEGGPIQNRKSKRCLELQENSDLEFGF
QLVLQKCSGQHWSITNVLRSLAS

>gi568815587r:11251947_11453119|GENSCAN_predicted_CDS_1|1512_bp
atggtgttagttcagggaacaaggcaggaccacacagcacaccaggtgtggcagtgtggc
gggagtgtggaggtcctgccctgctcacggattgcccacattgagcgagcccacaagccc
tacacagaggacctcaccgcccatgtccgcaggaacgctctcagggtggctgaagtctgg
atggatgaatttaaaagccacgtctacatggcatggaacataccgcaggaggactcagga
attgacattggggacatcactgcaaggaaggctctcaggaaacagctgcagtgcaagacc
ttccggtggtacctggtcagcgtgtacccagagatgaggatgtactccgacatcattgcc
tatggagtggctggtgcaattcacatctctgcaaacacctcagccagtgctgctcaggta
gtacctgagtctccagatcctgttgtccccatggaaacacattgcactctgcagaattct
ctgaagactgatttgtgtcttgaccaggggccagatacagagaatgtccccatcatgtac
atctgccatgggatgacgcctcagagctcaggaacgtgctattctgtctgtctcctcatt
ggttttaaattcctgggagaagtctacttggctctttgtaacagctccattctcactgat
ggtcagggtggcagagtcccagagcatagaccatttgggccaagccctggacagagccat
cttcagaggaaatgggtcactgtcagccaggcagcccctccaagggggacctcaggtgtc
atcatggctgctgcactgaaaggtggcctgtcagatgtggagtccccagaaggctcagga
gcaccaagtctgaacgtgtactacacgagcagtcagcagatccatgtgggcattctgagc
cccaccgtggatgatgatgacaaccgatgcctggtggacgtcaacagccggccccggctc
atcgaatgcagctacgccaaagccaagaggatgaagcttcactggcagttctctcagacc
ttggcaaggtgtcccttgaaaggcaagcaaagaaagggctgtggtgtcttctgtgcggga
cgtgtttctccaagagttggttgtctggggtctgcacagcacctcgctgttggcaaggcc
tgggccggccccaaggatgagctgagcagccagaatcttcagctgagtgggcagcggcac
ttggtccgggcccgtttgttgtgcgctttggtcacagcccccaccctgatcctccgatcc
gtacggtttatagctgataaacggattcctatcagtcctctggctcatccttccaggaat
caggacagaaatgaccatttgggcctgcagacaatgaaaccagaaggaggacccatccag
aaccgcaagtctaagcgctgtctggagctgcaggagaatagcgacctggagttcggcttc
cagctggtgttgcagaagtgctcgggccagcactggagcatcaccaacgtcctgaggagc
ctcgcgtcctga

>gi568815587r:11251947_11453119|GENSCAN_predicted_peptide_2|391_aa
MSGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINIT
NNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD
FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE
FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWRLGCMLASMIFRKEPFFHGRDNYD
QLVRIAKFLGTEDLYGYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF
LDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARMGSSSMPGGSTPVSSANVMSGISSVPT
PSPLGPLAGSPVIAAANPLGMPVPAATGAQQ

>gi568815587r:11251947_11453119|GENSCAN_predicted_CDS_2|1176_bp
atgtcgggacccgtgccaagcagggccagagtttacacagatgttaatacacacagacct
cgagaatactgggattacgagtcacatgtggtggaatggggaaatcaagatgactaccag
ctggttcgaaaattaggccgaggtaaatacagtgaagtatttgaagccatcaacatcaca
aataatgaaaaagttgttgttaaaattctcaagccagtaaaaaagaagaaaattaagcgt
gaaataaagattttggagaatttgagaggaggtcccaacatcatcacactggcagacatt
gtaaaagaccctgtgtcacgaacccccgccttggtttttgaacacgtaaacaacacagac
ttcaagcaattgtaccagacgttaacagactatgatattcgattttacatgtatgagatt
ctgaaggccctggattattgtcacagcatgggaattatgcacagagatgtcaagccccat
aatgtcatgattgatcatgagcacagaaagctacgactaatagactggggtttggctgag
ttttatcatcctggccaagaatataatgtccgagttgcttcccgatacttcaaaggtcct
gagctacttgtagactatcagatgtacgattatagtttggatatgtggagattgggttgt
atgctggcaagtatgatctttcggaaggagccatttttccatggacgtgacaattatgat
cagttggtgaggatagccaagtttctggggacagaagatttatatggctatattgacaaa
tacaacattgaattagatccacgtttcaatgatatcttgggcagacactctcgaaagcga
tgggaacgctttgtccacagtgaaaatcagcaccttgtcagccctgaggccttggatttc
ctggacaaactgctgcgatatgaccaccagtcacggcttactgcaagagaggccatggag
cacccctatttctacactgttgtgaaggaccaggctcgaatgggttcatctagcatgcca
gggggcagtacgcccgtcagcagcgccaatgtgatgtcagggatttcttcagtgccaact
ccttcaccccttggacctctggcaggctcaccagtgattgctgctgccaacccccttggg
atgcctgttccagctgccactggcgctcagcagtaa

>gi568815587r:11251947_11453119|GENSCAN_predicted_peptide_3|443_aa
XAPAKPEEAEAEPFTDSSLFAHWGQELSPEGRRVALKQFQYYGYNAYLSDRLPLDRPLPD
LRPSGCRNLSFPDSLPEVSIVFIFVNEALSVLLRSIHSAMERTPPHLLKEIILVDDNSSN
DQGSPLLTDPVFMLAMFARNLPYLLPGEGIQLSGPQEMGRRKLSLPTTVSDGQNPRERKV
GTSEIYLDLLMNVGDEGKEGMEDAAQVSSLSDGVKDSAVCKMGQTELEEEQVWYYQCENI
KKCGLFREELKEKLTEYVDKVNSQKPGFIKVVRHSKQEGLIRSRVSGWRAATAPVVALFD
AHVEFNVGWAEPVLTRIKENRKRIISPSFDNIKYDNFEIEEYPLAAQGFDWELWCRYLNP
PKAWWKLENSTAPIRSPALIGCFIVDRQYFQEIGLLDEGMEVYGGENVELGIRAGNWPWT
ALAPDLKGRLDTHSEHLTMPAMT

>gi568815587r:11251947_11453119|GENSCAN_predicted_CDS_3|1332_bp
naggctcctgccaagcctgaggaggcagaggccgagcccttcacagactcctctctgttt
gcacactggggccaggagctcagccccgaaggccggcgcgtggccctgaagcaattccag
tactacggctacaacgcctacctcagcgaccgcctgcccctggaccggcccctgcctgac
ctcagacccagtgggtgccgtaacctctcatttcctgacagcctgccagaggtgagcatc
gtgttcatcttcgtcaatgaagcgctttcagtgctgctgcgctccatccactcggccatg
gaacgcacgcccccacatctgctcaaggagatcattctggtggatgacaacagcagtaac
gaccagggatctcctttgctcacggacccggtcttcatgctggccatgtttgctagaaac
ctcccatatctgttgccaggagaaggcatacaactcagcgggcctcaagagatgggcaga
aggaaactgtccctcccaacaacagtgtcagatgggcagaacccaagggagagaaaagtg
ggtacatccgagatctatttggacttgctgatgaatgtaggggatgaaggaaaggaagga
atggaagatgcagctcaggtttctagcttgagtgacggggtgaaggacagtgcagtttgc
aagatgggccagacagaattagaggaagaacaggtttggtattaccagtgtgaaaacatt
aagaagtgtggccttttcagagaggaactgaaggagaagctgaccgaatatgtggacaag
gtgaacagccagaagccaggcttcatcaaagtcgtgcgtcacagcaagcaggaaggcctc
atccgctccagggtcagtggctggagggcggccactgcccctgtggtggcactctttgat
gcccacgtggagttcaatgtgggctgggctgaacctgtactcacccgcatcaaggagaac
cggaagcggatcatctcgccatcctttgataacatcaaatatgacaactttgagatagaa
gagtacccgctggctgcccagggctttgactgggagctgtggtgccgctacctaaatccc
cccaaggcctggtggaagctggagaactccacagcgccaatcaggagccctgccctcatt
ggctgcttcattgtggaccggcagtacttccaggagatcggcctgctggacgaaggcatg
gaagtctacgggggcgagaatgtggagcttgggatcagggcaggcaactggccctggacg
gcccttgcccctgacctaaaggggagattggacacccacagtgagcatctcacaatgcct
gcaatgacctga