GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:50:31

Sequence gi568815578r:383964_608551 : 224588 bp : 45.89% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4048   4338  291  0  0   95  102   213 0.610  20.73
 1.02 Intr +   7324   7616  293  0  2  104  105   391 0.978  38.33
 1.03 Term +  12235  12727  493  1  1  106   48   566 0.998  48.48
 1.04 PlyA +  13574  13579    6                               1.05

 2.00 Prom +  19827  19866   40                              -7.06
 2.01 Init +  23628  23708   81  2  0   45   82    91 0.464   5.17
 2.02 Intr +  24039  24253  215  2  2   85   35    17 0.131  -6.39
 2.03 Intr +  24728  24816   89  2  2   98   86    35 0.464   3.91
 2.04 Intr +  25867  26062  196  2  1   63   94   164 0.761  12.97
 2.05 Intr +  33563  33656   94  2  1  101  101   122 0.988  14.77
 2.06 Intr +  33769  33967  199  0  1  122  100   295 0.999  33.02
 2.07 Intr +  35384  35505  122  0  2  103  119    89 0.999  13.71
 2.08 Intr +  35595  35768  174  2  0   84   80   236 0.918  22.54
 2.09 Intr +  36908  37068  161  1  2   64   80   285 0.964  24.09
 2.10 Intr +  38164  38275  112  1  1  141   91   203 0.987  26.28
 2.11 Intr +  43350  43529  180  2  0   18   81   172 0.933   9.56
 2.12 Intr +  44528  44626   99  1  0   66  100   181 0.948  17.41
 2.13 Intr +  44988  45131  144  2  0   70   84   286 0.894  26.88
 2.14 Intr +  46387  46422   36  0  0  109   61    42 0.515   2.06
 2.15 Term +  51066  51200  135  2  0   15   48   111 0.327  -2.18
 2.16 PlyA +  51216  51221    6                              -0.45

 3.23 PlyA -  51535  51530    6                               1.05
 3.22 Term -  54878  54623  256  1  1  132   48   240 0.990  19.46
 3.21 Intr -  55332  55145  188  0  2   94   83   132 0.917  11.79
 3.20 Intr -  56426  56285  142  1  1  135   66    66 0.901   9.46
 3.19 Intr -  57726  57625  102  2  0   97   73   112 0.980   9.89
 3.18 Intr -  58080  57894  187  1  1   90   81   227 0.927  20.95
 3.17 Intr -  61167  61087   81  1  0   83   85    94 0.990   8.21
 3.16 Intr -  64111  63926  186  2  0  114  110   233 0.998  27.76
 3.15 Intr -  67745  67693   53  1  2   30   37    36 0.002  -8.75
 3.14 Intr -  78011  77891  121  0  1   71   50   159 0.051   9.95
 3.13 Intr -  78588  78373  216  1  0  -25   96   214 0.019   9.38
 3.12 Intr - 102499 102413   87  2  0   85   82    86 0.971   7.64
 3.11 Intr - 103612 103464  149  0  2   95   65   175 0.998  15.78
 3.10 Intr - 104815 104715  101  1  2   46  111    93 0.999   6.31
 3.09 Intr - 105918 105817  102  0  0   53   90    45 0.737   1.57
 3.08 Intr - 108401 108291  111  2  0   75  110    78 0.998   9.28
 3.07 Intr - 111839 111756   84  2  0  126   98    37 0.996   8.52
 3.06 Intr - 113817 113758   60  0  0   57  115    99 0.995   8.43
 3.05 Intr - 115342 115292   51  1  0   87   70    34 0.586   0.60
 3.04 Intr - 115971 115870  102  0  0  103   89    74 0.959   9.37
 3.03 Intr - 121266 121155  112  2  1  115  113   129 0.999  18.48
 3.02 Intr - 158992 158967   26  1  2   93   64    14 0.035  -3.68
 3.01 Init - 159927 159709  219  0  0  101   82   212 0.958  18.53
 3.00 Prom - 160262 160223   40                              -3.96

 4.05 PlyA - 160445 160440    6                              -0.45
 4.04 Term - 162294 162281   14  1  2  110   54     4 0.029  -2.44
 4.03 Intr - 175473 175372  102  1  0   54   30   143 0.459   5.25
 4.02 Intr - 192589 192509   81  2  0   82   92    27 0.165   2.11
 4.01 Init - 195207 195075  133  0  1   78   47    77 0.127   2.90
 4.00 Prom - 199488 199449   40                              -3.56

 5.04 PlyA - 200711 200706    6                               1.05
 5.03 Term - 205242 205211   32  1  2  135   38    24 0.639   0.12
 5.02 Intr - 213951 213819  133  0  1   46   96    60 0.197   2.82
 5.01 Intr - 220702 220667   36  1  0  128  100    43 0.843   7.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:383964_608551|GENSCAN_predicted_peptide_1|358_aa
MRATPLAAPAGSLSRKKRLELDDNLDTERPVQKRARSGPQPRLPPCLLPLSPPTAPDRAT
AVATASRLGPYVLLEPEEGGRAYQALHCPTGTEYTCKVYPVQEALAVLEPYARLPPHKHV
ARPTEVLAGTQLLYAFFTRTHGDMHSLVRSRHRIPEPEAAVLFRQMATALAHCHQHGLVL
RDLKLCRFVFADRERKKLVLENLEDSCVLTGPDDSLWDKHACPAYVGPEILSSRASYSGK
AADVWSLGVALFTMLAGHYPFQDSEPVLLFGKIRRGAYALPAGLSAPARCLVRCLLRREP
AERLTATGILLHPWLRQDPMPLAPTRSHLWEAAQVVPDGLGLDEAREEEGDREVVLYG

>gi568815578r:383964_608551|GENSCAN_predicted_CDS_1|1077_bp
atgcgagccacccctctggctgctcctgcgggttccctgtccaggaagaagcggttggag
ttggatgacaacttagataccgagcgtcccgtccagaaacgagctcgaagtgggccccag
cccagactgcccccctgcctgttgcccctgagcccacctactgctccagatcgtgcaact
gctgtggccactgcctcccgtcttgggccctatgtcctcctggagcccgaggagggcggg
cgggcctaccaggccctgcactgccctacaggcactgagtatacctgcaaggtgtacccc
gtccaggaagccctggccgtgctggagccctatgcgcggctgcccccgcacaagcatgtg
gctcggcccactgaggtcctggctggtacccagctcctctacgcctttttcactcggacc
catggggacatgcacagcctggtgcgaagccgccaccgtatccctgagcctgaggctgcc
gtgctcttccgccagatggccaccgccctggcgcactgtcaccagcacggtctggtcctg
cgtgatctcaagctgtgtcgctttgtcttcgctgaccgtgagaggaagaagctggtgctg
gagaacctggaggactcctgcgtgctgactgggccagatgattccctgtgggacaagcac
gcgtgcccagcctacgtgggacctgagatactcagctcacgggcctcatactcgggcaag
gcagccgatgtctggagcctgggcgtggcgctcttcaccatgctggccggccactacccc
ttccaggactcggagcctgtcctgctcttcggcaagatccgccgcggggcctacgccttg
cctgcaggcctctcggcccctgcccgctgtctggttcgctgcctccttcgtcgggagcca
gctgaacggctcacagccacaggcatcctcctgcacccctggctgcgacaggacccgatg
cccttagccccaacccgatcccatctctgggaggctgcccaggtggtccctgatggactg
gggctggacgaagccagggaagaggagggagacagagaagtggttctgtatggctag

>gi568815578r:383964_608551|GENSCAN_predicted_peptide_2|678_aa
MRQTNANFTNSSTKRQTVTAERQRRIWPPAPPAPPPAPPRPRPPRLRPSSFPRLCDAARR
VTRAGVRGPAISPGGRGGVAPNRSAGTAGTPHSASAAAGRPGGSISQEARSPPGGWAQPR
QMDEKTKKAPENKPCANWLLLYWLSAEEMALSLTRAVAGGDEQVAMKCAIWLAEQRVPLS
VQLKPEVSPTQDIRLWVSVEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWV
IGQRLARDQETLHSHGVRQNGDSAYLYLLSARNTSLNPQELQRERQLRMLEDLGFKDLTL
QPRGPLEPGPPKPGVPQEPGRGQPDAVPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPE
AYQVPASYQPDEEERARLAGEEEALRQYQQRKQQQQEGNYLQHVQLDQRSLVLNTEPAEC
PVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIK
ALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLC
KAIHEQMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGEAMRCPQCQIVVQKKDGCDW
IRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRKGHVEKRHIKLWLGSKTKCQLLGSPD
QGVKHTKSTPDPHQLCRL

>gi568815578r:383964_608551|GENSCAN_predicted_CDS_2|2037_bp
atgaggcagacgaatgcaaacttcaccaatagctcaacgaaaagacagacggtgaccgct
gagaggcagcgtcggatctggcccccggcccccccggccccgcccccggccccgccccgg
ccccgcccaccccgcctgcggcccagctccttcccgcggctctgcgatgcggcccgcagg
gtgacccgggcgggagtccggggacccgcgatcagccccggaggacggggtggggtcgcc
ccaaacaggagcgccgggaccgctgggaccccgcactcggcgtccgccgccgccgggcga
cccggaggtagcatttcccaggaggcacggtcccccccagggggatgggcacagccacgc
cagatggacgagaagaccaagaaagctcctgaaaataaaccctgtgctaactggctcctg
ctgtactggctttcagcagaggaaatggccctgagcctcacccgagcagtggcgggcggg
gatgaacaggtggcaatgaagtgtgccatctggctggcagagcaacgggtgcccctgagt
gtgcaactgaagcctgaggtctccccaacgcaggacatcaggctgtgggtgagcgtggag
gatgctcagatgcacaccgtcaccatctggctcacagtgcgccctgatatgacagtggcg
tctctcaaggacatggtttttctggactatggcttcccaccagtcttgcagcagtgggtg
attgggcagcggctggcacgagaccaggagaccctgcactcccatggggtgcggcagaat
ggggacagtgcctacctctatctgctgtcagcccgcaacacctccctcaaccctcaggag
ctgcagcgggagcggcagctgcggatgctggaagatctgggcttcaaggacctcacgctg
cagccgcggggccctctggagccaggccccccaaagcccggggtcccccaggaacccgga
cgggggcagccagatgcagtgcctgagcccccaccggtgggctggcagtgccccgggtgc
accttcatcaacaagcccacgcggcctggctgtgagatgtgctgccgggcgcgccccgag
gcctaccaggtccccgcctcataccagcccgacgaggaggagcgagcgcgcctggcgggc
gaggaggaggcgctgcgtcagtaccagcagcggaagcagcagcagcaggaggggaactac
ctgcagcacgtccagctggaccagaggagcctggtgctgaacacggagcccgccgagtgc
cccgtgtgctactcggtgctggcgcccggcgaggccgtggtgctgcgtgagtgtctgcac
accttctgcagggagtgcctgcagggcaccatccgcaacagccaggaggcggaggtctcc
tgccccttcattgacaacacctactcgtgctcgggcaagctgctggagagggagatcaag
gcgctcctgacccctgaggattaccagcgatttctagacctgggcatctccattgctgaa
aaccgcagtgccttcagctaccattgcaagaccccagattgcaagggatggtgcttcttt
gaggatgatgtcaatgagttcacctgccctgtgtgtttccacgtcaactgcctgctctgc
aaggccatccatgagcagatgaactgcaaggagtatcaggaggacctggccctgcgggct
cagaacgatgtggctgcccggcagacgacagagatgctgaaggtgatgctgcagcagggc
gaggccatgcgctgcccccagtgccagatcgtggtacagaagaaggacggctgcgactgg
atccgctgcaccgtctgccacaccgagatctgctgggtcaccaagggcccacgctggggc
cctgggggcccaggagacaccagcgggggctgccgctgcaggaaagggcatgtggagaag
cggcacatcaagctctggttaggatccaaaaccaaatgccagctcctaggatccccagac
cagggtgtgaaacacaccaagagcaccccagacccgcaccagttgtgtcgactgtga

>gi568815578r:383964_608551|GENSCAN_predicted_peptide_3|911_aa
MAAFREIPLGAESEAVSPRLLVGGGFRFRQQRLQPRSGPCGWRPSRVSPPPSPPYCLCEQ
RGERPPPLPLPPQCWNIARLSRNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP
VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD
IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV
ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE
DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR
LTAREAMEHPYFYTVVKDQARMGSSSMPGGSTPVSSANMMSAGRLRACAPLADGGEPADA
ERVLRPAVGAASSPGSATSRGSGGGPGPRGMALRSAQGDGPTSGHWDGGAEKAGSRSRLP
EGYQLSRTAFTVAGLIDALPAYRRCNYHTVLPLRMGFAGKGRRYLEAIGDKNFNAKRKKK
VAEIHQALNSDPTDVAALRRMAISEGGLLTDEIRRKVWPKLLNVNANDPPPISGKNLRQM
SKDYQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVT
FLLVVGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEV
GTIFALSWLITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLYREQEVLDCDCDM
ASVHHLLSQIPQDLPYETLISRAGDLFVQFPPSELAREAAAQQQAERTAASTFKDFELAS
AQQRPDMVLRQRFRGLLRPEDRTKDVLTKPRTNRFVKLAVMGLTVALGAAALAVVKSALE
WAPKFQLQLFP

>gi568815578r:383964_608551|GENSCAN_predicted_CDS_3|2736_bp
atggccgcattcagagagattcctctgggggcggagtcggaagctgtctcgccccgcctc
ctggtaggagggggtttccgcttccggcagcagcggctgcagcctcgctctggtccctgc
ggctggcggccgagccgtgtgtctcctcctccatcgccgccatattgtctgtgtgagcag
aggggagagcggccgccgccgctgccgcttccaccacagtgttggaacattgctagatta
agcagaaatcaagatgactaccagctggttcgaaaattaggccgaggtaaatacagtgaa
gtatttgaagccatcaacatcacaaataatgaaaaagttgttgttaaaattctcaagcca
gtaaaaaagaagaaaattaagcgtgaaataaagattttggagaatttgagaggaggtccc
aacatcatcacactggcagacattgtaaaagaccctgtgtcacgaacccccgccttggtt
tttgaacacgtaaacaacacagacttcaagcaattgtaccagacgttaacagactatgat
attcgattttacatgtatgagattctgaaggccctggattattgtcacagcatgggaatt
atgcacagagatgtcaagccccataatgtcatgattgatcatgagcacagaaagctacga
ctaatagactggggtttggctgagttttatcatcctggccaagaatataatgtccgagtt
gcttcccgatacttcaaaggtcctgagctacttgtagactatcagatgtacgattatagt
ttggatatgtggagtttgggttgtatgctggcaagtatgatctttcggaaggagccattt
ttccatggacatgacaattatgatcagttggtgaggatagccaaggttctggggacagaa
gatttatatgactatattgacaaatacaacattgaattagatccacgtttcaatgatatc
ttgggcagacactctcgaaagcgatgggaacgctttgtccacagtgaaaatcagcacctt
gtcagccctgaggccttggatttcctggacaaactgctgcgatatgaccaccagtcacgg
cttactgcaagagaggcaatggagcacccctatttctacactgttgtgaaggaccaggct
cgaatgggttcatctagcatgccagggggcagtacgcccgtcagcagcgccaatatgatg
tcagcggggcgcctgcgcgcctgcgcgccgctggccgacggaggggagcctgccgatgcc
gagcgggtgctacgtcccgcggtcggagccgcgtcttctcccggctccgccaccagccgg
ggctcgggtgggggcccggggccccggggcatggccctccggagtgcgcagggcgacggc
cccacctccggccactgggacggcggcgcggagaaggcaggctcccggagccgcctcccc
gaggggtatcagctctcccgaactgcattcaccgtcgccggcttgattgacgcgctgccc
gcgtaccgccgatgtaattaccacacagttcttcctttaagaatgggctttgcaggaaaa
ggaagaaggtatctggaagcaataggagacaaaaactttaacgccaaaaggaaaaagaaa
gtggcagagatacaccaggctctgaacagtgatcccactgatgtggctgcccttagacgc
atggctatcagtgaaggagggctcctgactgatgagatcagacgaaaagtgtggcccaag
ctcctcaatgtcaatgccaatgacccacctcctatatcagggaagaacctacggcagatg
agcaaggactaccaacaagtgttgctggacgtccggcggtcattgcggcggttccctcct
ggcatgccagaggaacagagagaagggctccaggaagaactgattgacatcatcctcctc
atcttggagcgcaaccctcagctgcactactaccagggctaccatgacattgtggtcaca
tttctgctggtggtaggcgagaggctggcaacatccctggtagaaaaattatctacccac
cacctcagggattttatggatccaacaatggacaacaccaagcatatattaaactatctg
atgcccatcattgaccaggtgaatccagagctccatgacttcatgcagagtgctgaggta
gggaccatctttgccctcagctggctcatcacctggtttgggcatgtcctgtctgacttc
aggcacgtcgtgcggttatatgacttcttcctggcctgccacccactgatgccgatttac
tttgcagccgtgattgtgttgtatcgcgagcaggaagtcctggactgtgactgtgacatg
gcctcggtccaccacctgttgtcccagatccctcaggacttgccctatgagacactgatc
agcagagcaggagacctttttgttcagtttcccccatccgaacttgctcgggaggccgct
gcccaacagcaagctgagaggacggcagcctctactttcaaagactttgagctggcatca
gcccagcagaggcctgatatggtgctgcggcagcggtttcggggacttctgcggcctgaa
gatcgaacaaaagatgtcctgaccaagccaaggaccaaccgctttgtgaaattggcagtg
atggggctgacagtggcacttggagcggctgcactggctgtggtgaaaagtgccctggaa
tgggcccctaagtttcagctgcagctgtttccctga

>gi568815578r:383964_608551|GENSCAN_predicted_peptide_4|109_aa
MEYYAAIKKDVFMSFVETWMKLEAIILSKLSQGQKTKHRMFSLIDFGSNDSSSKRLSLPT
LFGSFIMDITIYPKPGKSNIQELADSMSGEDRFLVHRWLLTVSSHERLA

>gi568815578r:383964_608551|GENSCAN_predicted_CDS_4|330_bp
atggaatactatgcagccataaaaaaggatgtgttcatgtcctttgtagagacatggatg
aagctggaagccatcattctcagcaaactatcgcaaggacaaaaaaccaaacaccgcatg
ttctcactcatagactttggctccaatgacagctcttcaaagaggctttctctgcctacc
ctatttggttccttcataatggacatcacaatatatccgaagcctggcaagtccaacatc
caggagctggcagattccatgtctggtgaagaccgcttcctggttcatagatggcttctc
accgtgtcctcacatgaaagactagcctga

>gi568815578r:383964_608551|GENSCAN_predicted_peptide_5|66_aa
GGRRDLGGSCLKMRKRRHKEVKELGQGDTVAGGFESDVLAAEPHWALNHHPHMTSPGPPV
LFAFSP

>gi568815578r:383964_608551|GENSCAN_predicted_CDS_5|201_bp
ggtggccgtcgtgacctggggggcagctgcttgaagatgaggaaacggaggcacaaggag
gttaaagaacttggccaaggtgacacagtggctggtggatttgaatcagatgttctagct
gcagagccccactgggctctcaaccaccacccccacatgacctcaccaggtcccccggtc
ctttttgccttcagtccatga