GENSCAN 1.0	Date run:  6-Nov-116	Time: 01:14:48

Sequence gi568815578r:34181037_34395586 : 214550 bp : 45.71% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    302    297    6                               1.05
 1.07 Term -    362    348   15  2  0  119   43     7 0.003  -2.46
 1.06 Intr -  10452  10380   73  2  1   62   99    70 0.517   4.91
 1.05 Intr -  15742  15667   76  2  1   87   80    96 0.118   7.27
 1.04 Intr -  20617  20548   70  1  1   66   63    41 0.008  -1.85
 1.03 Intr -  32753  32567  187  1  1   59   82    82 0.050   4.39
 1.02 Intr -  34510  33420 1091  1  2   87   64   382 0.042  24.54
 1.01 Init -  34856  34749  108  2  0   83   89    53 0.961   5.12
 1.00 Prom -  44323  44284   40                              -3.66

 2.00 Prom +  51449  51488   40                              -5.86
 2.01 Init +  52741  52846  106  0  1   92   47    61 0.064   2.78
 2.02 Intr +  60371  60453   83  0  2   44   84    62 0.015   0.76
 2.03 Intr +  71120  71223  104  1  2  102   10    66 0.210  -0.83
 2.04 Intr +  79329  79498  170  0  2  130  106   119 0.824  17.49
 2.05 Intr +  81745  81857  113  2  2   91  116    71 0.909  10.30
 2.06 Term +  87955  88131  177  0  0   88   53   254 0.983  19.59
 2.07 PlyA +  91692  91697    6                               1.05

 3.17 PlyA -  91876  91871    6                               1.05
 3.16 Term - 100129  99998  132  1  0  101   54   209 0.972  16.89
 3.15 Intr - 104598 104404  195  0  0  110   98   300 0.997  32.81
 3.14 Intr - 109413 109296  118  2  1   60   94   299 0.997  28.17
 3.13 Intr - 109602 109515   88  1  1   61   94   113 0.995   8.23
 3.12 Intr - 109902 109695  208  0  1  123   53   431 0.999  41.75
 3.11 Intr - 110495 110383  113  0  2   83  105   247 0.999  26.00
 3.10 Intr - 111471 111322  150  1  0   52   99   286 0.902  26.23
 3.09 Intr - 113120 113045   76  2  1   96  114    76 0.979  10.09
 3.08 Intr - 114549 114359  191  1  2   95   78   388 0.999  37.80
 3.07 Intr - 122295 122207   89  2  2   16  109    79 0.570   2.41
 3.06 Intr - 122620 122482  139  2  1   43  117   102 0.388   8.12
 3.05 Intr - 130368 130245  124  0  1   49   36    87 0.287  -0.24
 3.04 Intr - 135160 135050  111  1  0   74   59    83 0.561   4.58
 3.03 Intr - 151728 151569  160  2  1   93   29   126 0.346   7.19
 3.02 Intr - 152858 152828   31  0  1  106   77    30 0.756   0.89
 3.01 Init - 154840 154768   73  1  1   71  109    18 0.707   2.08
 3.00 Prom - 166904 166865   40                              -2.86


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:34181037_34395586|GENSCAN_predicted_peptide_1|539_aa
MDKQALLGLNPNADSDFRLRALAYFEQLKISPDAWQNISLSGPSFFFDILSVVDLNPRGV
DLYLRILMAINSELVDRDVVHTSEEAHRNTLIKDTMREQCIPNLVESWYQISQNYQYTNS
EVMCQCLEVVGAYVSWIDLSLLANDRFINMLLGHMSIEVLREEACDCLFEVVNKGMDPVD
KMKLVESLCQVLQSAGFFSIDQEEDVDFFSALTRKKMLARFSKPVNGMGQSWIVSWSKLT
KNGNIKNAQEALQAIETKVALMLQLLIHEDDDISSNIGFCYDYLHILKQLTVLSDQQKAN
VEAIMLAVMKKLTYDEEYNFENEGQDKAMFVEYRKQLKLVLDRLAQVSRELLLASVRRVF
SSTLQNWQTTRFMEVEVAIRLLYMLAEALPVSISWCSLLSCPLQKGILRSGVCTFLHRMI
ICLEEEVFPFIPSASEHILKDCEAKDLQEFIPLINQITAKFKVYGSGSTRTRIYQRQLET
NSCLSNSCPVSKMQTSKGSREYFTPQNRLRRSCSRPPTDRWDQRAFNGDDSVLREVQLS

>gi568815578r:34181037_34395586|GENSCAN_predicted_CDS_1|1620_bp
atggataaacaggctctattagggctaaatccaaatgctgattcagactttagactaagg
gccctggcctattttgagcagttaaagatttccccagatgcctggcagaatatctcacta
agtggcccaagttttttttttgacattctctcagtagtggacctaaatccaaggggagta
gatctgtacctgcgaatcctcatggctatcaactcagagttggtggatcgtgatgtggtg
catacatcagaggaggctcacaggaatactctcataaaagataccatgagggaacagtgc
attccaaatctggtggaatcatggtaccaaatatcacaaaattatcagtatactaattct
gaagtgatgtgtcagtgccttgaagtagttggggcttatgtctcttggattgacttatcc
cttttagccaatgataggtttataaatatgctgctaggtcatatgtcaatagaagttcta
cgggaagaagcatgtgactgtttatttgaagttgtaaataaaggaatggaccctgttgat
aaaatgaaactagtagaatctttgtgtcaagtattacagtctgctggctttttcagcatt
gaccaggaagaagatgttgacttcttttcagcattgaccaggaagaagatgttggccaga
ttttctaagccggtaaacggaatgggacagtcatggatagttagttggagtaaattaact
aagaatgggaatattaagaatgctcaagaggcactacaagctattgaaacaaaagtggca
ctgatgttgcagctactaattcatgaggatgatgatatttcttctaatattggattttgt
tatgattatcttcatattttgaaacagcttacagtgctctcggatcagcaaaaagctaat
gtggaggcaatcatgttggccgttatgaaaaaattgacttatgatgaagaatataacttt
gaaaatgagggtcaagataaagccatgtttgtagaatatagaaaacaactgaagttagtg
ttggacaggcttgctcaagtttcacgagagttactactggcctctgttcgcagagttttt
agttctacactgcagaattggcagactacacggttcatggaagttgaagtagcaataaga
ttgctgtatatgttggcagaagctcttccagtatctatctcatggtgctcacttctcagt
tgtcccttacaaaagggtattctcagaagtggagtctgtactttccttcatcgaatgatt
atttgcctggaggaagaagtttttccgttcatcccatctgcttcagaacatatactcaaa
gattgtgaagcaaaagacctccaggagttcattcctcttatcaaccagattacggccaaa
ttcaaggtatatggctccggctccactcgcacccgaatctatcaaaggcagctggagacc
aattcttgtctctccaacagctgccctgtgagcaaaatgcagacctctaagggctctagg
gagtacttcacccctcagaaccggctacgcaggtcctgctccaggcctcccacagaccgc
tgggaccagagggccttcaatggggatgacagtgtgctcagggaggtacaactctcctag

>gi568815578r:34181037_34395586|GENSCAN_predicted_peptide_2|250_aa
MMWPQLADQTRTAKPLPEKKSTGMRYQWNSLEEVKVIDEQAANLYSCKVKKEVPWPGLFA
GKHVGRETEKRNKTQRQSIEKEQWAQETGAQYTEDPHWPPGMDVTRLLLATLLVFLCFFT
ANSHLPPEEKLRDDRSLRSNSSVNLLDVPSVSIVAQRPQKHLTLLLLSLFEALNKKSKQI
GRKAAEKKRSSKKEASMKKVVRPRTPLSAPCVATRNSCKPPAPACCDPCASCQCRFFRSA
CSCRVLSLNC

>gi568815578r:34181037_34395586|GENSCAN_predicted_CDS_2|753_bp
atgatgtggccacaattggctgatcagactagaacagcaaaaccattacctgagaaaaag
tcaacaggaatgagataccagtggaatagcttggaagaggtcaaagttatagatgagcaa
gcagcaaatctctacagctgcaaggtgaaaaaggaagttccttggcctgggctctttgcg
ggaaagcatgtgggacgagagactgagaaaagaaataagacacagagacaaagtatagag
aaagaacagtgggcccaggagaccggtgctcagtatacagaggacccgcactggcctcct
gggatggatgtcacccgcttactcctggccaccctgctggtcttcctctgcttcttcact
gccaacagccacctgccacctgaggagaagctccgagatgacaggagcctgagaagcaac
tcctctgtgaacctactggatgtcccttctgtctctattgtggctcaacgtccccagaaa
catctgactttgctccttttgtctctctttgaagcgctgaacaagaaatccaaacagatc
ggcagaaaagcagcagaaaagaaaagatcttctaagaaggaggcttcgatgaagaaagtg
gtgcggccccggacccccctatctgcgccctgcgtggccacccgcaacagctgcaagccg
ccggcacccgcctgctgcgacccgtgcgcctcctgccagtgccgcttcttccgcagcgcc
tgctcctgccgcgtgctcagcctcaactgctga

>gi568815578r:34181037_34395586|GENSCAN_predicted_peptide_3|665_aa
MYPQVSSILEAFMLEILSFSFQWAAFPPHKTLKEWREHVSECGIWPATPSTDTGASSMRA
RGHTRCIASRGTWRHPGKDACDPEAPERTPRAAIMKYHAFGGLQQQKFILSQFWKPEVQN
QGIGRKLHWGLDLEKGHQQLTSRAAFSGVGGDPQGSTVSSFLYIQPDEEIEAQGSELAEF
QFRWVLTLNQLAEPARGRPGWLSGLSRRSLPDRSCSQTEAQPPSPVSITSAASMSDKLPY
KVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIETL
VTLGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDGPLNM
ILDDGGDLTNLIHTKYPQLLPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKS
KFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPI
NALQAAMEGYEVTTMDEACQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEID
VKWLNENAVEKVNIKPQVDRYRLKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVM
AQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKP
DHYRY

>gi568815578r:34181037_34395586|GENSCAN_predicted_CDS_3|1998_bp
atgtacccacaggtctcctctatcctggaggcattcatgcttgagatcctgagcttctca
ttccaatgggcagcttttcctccgcataagaccctgaaggaatggagggagcacgtgagt
gagtgcgggatctggccagccactccaagcactgacacaggagcaagctccatgcgggcc
cgtggacacaccaggtgtattgcctcaagggggacatggcggcatccaggcaaggatgcc
tgcgaccctgaagccccagagaggactcccagagctgccattatgaagtaccacgcattt
ggtggcttacaacaacagaaatttattctctcacagttctggaagccagaagtccaaaat
caaggcattggcaggaagctccactggggcctggacctggagaagggacatcaacagtta
acgtccagggcagctttcagcggcgtgggcggggatccccagggaagcactgttagcagt
ttcttgtacatccagcctgatgaggaaattgaggcacagggaagtgaactggcggaattt
cagttccgctgggttttgacactgaatcaactggctgaaccagcgagaggacggcccggc
tggctctcaggcctctcccggcgctcccttccggaccgttcctgttcccagactgaggcc
cagcccccttcgcccgtttccatcacgagtgccgccagcatgtctgacaaactgccctac
aaagtcgccgacatcggcctggctgcctggggacgcaaggccctggacattgctgagaac
gagatgccgggcctgatgcgtatgcgggagcggtactcggcctccaagccactgaagggc
gcccgcatcgctggctgcctgcacatgaccgtggagacggccgtcctcattgagaccctc
gtcaccctgggtgctgaggtgcagtggtccagctgcaacatcttctccacccaggaccat
gcggcggctgccattgccaaggctggcattccggtgtatgcctggaagggcgaaacggac
gaggagtacctgtggtgcattgagcagaccctgtacttcaaggacgggcccctcaacatg
attctggacgacgggggcgacctcaccaacctcatccacaccaagtacccgcagcttctg
ccaggcatccgaggcatctctgaggagaccacgactggggtccacaacctctacaagatg
atggccaatgggatcctcaaggtgcctgccatcaatgtcaatgactccgtcaccaagagc
aagtttgacaacctctatggctgccgggagtccctcatagatggcatcaagcgggccaca
gatgtgatgattgccggcaaggtagcggtggtagcaggctatggtgatgtgggcaagggc
tgtgcccaggccctgcggggtttcggagcccgcgtcatcatcaccgagattgaccccatc
aacgcactgcaggctgccatggagggctatgaggtgaccaccatggatgaggcctgtcag
gagggcaacatctttgtcaccaccacaggctgtattgacatcatccttggccggcacttt
gagcagatgaaggatgatgccattgtgtgtaacattggacactttgacgtggagatcgat
gtcaagtggctcaacgagaacgccgtggagaaggtgaacatcaagccgcaggtggaccgg
tatcggttgaagaatgggcgccgcatcatcctgctggccgagggtcggctggtcaacctg
ggttgtgccatgggccaccccagcttcgtgatgagtaactccttcaccaaccaggtgatg
gcgcagatcgagctgtggacccatccagacaagtaccccgttggggttcatttcctgccc
aagaagctggatgaggcagtggctgaagcccacctgggcaagctgaatgtgaagttgacc
aagctaactgagaagcaagcccagtacctgggcatgtcctgtgatggccccttcaagccg
gatcactaccgctactga