GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:08:05

Sequence gi568815589r:121241205_121470187 : 228983 bp : 43.61% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   3399   3438   40                              -1.76
 1.01 Init +  15273  15315   43  2  1   80   86    22 0.452   1.78
 1.02 Intr +  23950  24027   78  2  0  102   58    29 0.622   0.82
 1.03 Intr +  24457  24550   94  2  1   96   78    77 0.966   6.52
 1.04 Intr +  26694  27015  322  0  1   82   91    86 0.646   4.16
 1.05 Term +  28031  28168  138  1  0  108   45    30 0.567  -1.34
 1.06 PlyA +  29866  29871    6                               1.05

 2.04 PlyA -  30219  30214    6                               1.05
 2.03 Term -  40165  40071   95  2  2  105   42    50 0.443   0.09
 2.02 Intr -  41410  41265  146  0  2   47   96   102 0.546   6.83
 2.01 Init -  47061  47018   44  0  2   56   94    30 0.296   0.30
 2.00 Prom -  48892  48853   40                              -5.86

 3.00 Prom +  49882  49921   40                              -7.46
 3.01 Init +  58658  58801  144  1  0  121  100   259 0.998  28.52
 3.02 Intr +  60759  60963  205  2  1   86   68   365 0.990  33.07
 3.03 Intr +  61707  61861  155  1  2   72   98   303 0.951  29.49
 3.04 Intr +  69480  69641  162  2  0  116   92   230 0.999  26.37
 3.05 Intr +  71135  71284  150  1  0  104   51   240 0.956  22.26
 3.06 Intr +  72730  72819   90  0  0  132  105   185 0.999  24.79
 3.07 Intr +  75882  76014  133  2  1  117   79   222 0.999  24.42
 3.08 Intr +  77202  77290   89  1  2   98  109   107 0.885  13.49
 3.09 Intr +  77461  77676  216  0  0  127   98   326 0.984  36.20
 3.10 Intr +  80064  80197  134  2  2   67   81   199 0.989  16.54
 3.11 Intr +  83350  83440   91  1  1  114   99    94 0.996  13.10
 3.12 Intr +  85308  85478  171  2  0  100   76   229 0.970  23.04
 3.13 Intr +  86104  86278  175  0  1   67   91   165 0.987  14.21
 3.14 Intr +  87687  87811  125  1  2   72   77   162 0.998  13.80
 3.15 Intr +  88034  88111   78  1  0  117   94   136 0.775  16.85
 3.16 Intr +  90184  90244   61  0  1  111   81    44 0.921   4.31
 3.17 Term +  91230  91399  170  1  2   75   55   252 0.983  18.64
 3.18 PlyA +  91617  91622    6                               1.05

 4.00 Prom +  92509  92548   40                              -3.46
 4.01 Init +  93973  94057   85  0  1   45   80    18 0.661  -2.32
 4.02 Term +  94266  94369  104  1  2   87   39   178 0.993  11.24
 4.03 PlyA +  96285  96290    6                               1.05

 5.09 PlyA -  97897  97892    6                               1.05
 5.08 Term - 100204  99998  207  1  0  110   36   215 0.999  15.84
 5.07 Intr - 106945 106811  135  1  0   83   88   190 0.999  19.26
 5.06 Intr - 108119 107916  204  2  0   84   75   188 0.996  16.50
 5.05 Intr - 112098 112016   83  1  2   94   94    37 0.924   4.26
 5.04 Intr - 113469 113397   73  0  1   94   65    74 0.538   4.68
 5.03 Intr - 124752 124691   62  1  2  104   86   -28 0.042  -2.95
 5.02 Intr - 129047 128923  125  1  2   89   96   152 0.394  16.33
 5.01 Init - 142860 142826   35  0  2   69  115   -11 0.363  -0.66
 5.00 Prom - 153462 153423   40                              -1.46

 6.04 PlyA - 154777 154772    6                               1.05
 6.03 Term - 176178 175105 1074  0  0  -14   42   409 0.187  18.22
 6.02 Intr - 176713 176466  248  2  2   46   41   216 0.096   9.88
 6.01 Init - 178740 178341  400  0  1   55  -52   306 0.032  10.13
 6.00 Prom - 193766 193727   40                              -3.86

 7.09 PlyA - 194310 194305    6                               1.05
 7.08 Term - 197889 197773  117  0  0   90   39    45 0.271  -1.66
 7.07 Intr - 206393 206123  271  1  1  119   16   262 0.203  19.64
 7.06 Intr - 211136 210940  197  2  2   71   71    76 0.193   2.41
 7.05 Intr - 220348 220286   63  1  0  143   62     0 0.187   1.81
 7.04 Intr - 222124 222089   36  1  0   89  106    -3 0.219   0.06
 7.03 Intr - 224563 224407  157  0  1   83   82    52 0.763   4.11
 7.02 Intr - 226727 226639   89  2  2  117   91    13 0.987   3.27
 7.01 Init - 227194 227048  147  1  0   44   99    96 0.737   6.39

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:121241205_121470187|GENSCAN_predicted_peptide_1|224_aa
MGLEDVESRIVAGEGTNYKAFDAQQILVLITSLSEASSRRASLWEGGGLLAKEDIKVLPS
EEILISKTFTLRPLQISPPCSGPQFPPGESRGLGLVPSCEVKRGVPLDEGELGATRPAAD
GRAWRSSPTRLPGRPAPRAAPARALPTPAARTTTPPPRRPEPAERSWTQQPLSPVPQQQD
HISDQGTRTSHRSAVYSDHSLLESYPISISSISQLRKVKDPESL

>gi568815589r:121241205_121470187|GENSCAN_predicted_CDS_1|675_bp
atgggtctcgaggatgtagaaagtagaattgtggctggggaggggacaaactacaaggca
ttcgatgctcaacaaatacttgtgctgataacttctctttctgaagccagctccaggaga
gcctcactctgggaaggaggtggtcttctggcaaaagaagatatcaaagttcttccatca
gaggagatccttatcagcaagacattcactctgaggcctcttcagatctcccctccgtgc
tccgggcctcagtttcctccaggggaaagcagagggcttggtttggtgccttcctgcgag
gtgaagcgaggggtccccctggacgaaggcgagcttggagccacccgcccagcagccgac
gggagggcctggcgctcctcccccacccgcctgcccggccgccccgccccgagggcggct
cccgcccgcgccctgcccaccccggccgcgcgcaccacaacgcccccgccccgccgcccg
gaaccagctgagcgcagctggacccagcagccgctgtctccagtgccgcagcagcaggac
cacatttctgaccagggcaccaggacctctcaccgctctgccgtttacagcgaccatagc
ttgctagaatcttaccccatctccatttcctccatttcacagttgagaaaagtcaaggac
ccagagagtttatga

>gi568815589r:121241205_121470187|GENSCAN_predicted_peptide_2|94_aa
MNTALDLRRDRKQARPFGNPWLLGHNILGTTKKPFHLSFGKEEQLRLWVAHVTIWKPAGP
QQTRVTQSVLAHIQQHRTHYLPRLQDLLLEGLAA

>gi568815589r:121241205_121470187|GENSCAN_predicted_CDS_2|285_bp
atgaacacagctctggatcttcggagagacagaaagcaggccagaccttttgggaatccc
tggcttttggggcacaacatcctggggaccaccaaaaagccctttcacctgagctttggg
aaagaggaacagctccggctgtgggtggctcatgtcaccatctggaagccagctgggcca
cagcagacgcgggtcacacaatcagtacttgcacacatccagcaacaccgcactcactac
ctgccaaggctgcaagacctgctgctggagggtttggctgcgtaa

>gi568815589r:121241205_121470187|GENSCAN_predicted_peptide_3|782_aa
MAPHRPAPALLCALSLALCALSLPVRAATASRGASQAGAPQGRVPEARPNSMVVEHPEFL
KAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNEC
SQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVV
PNEVVVQRLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKA
TQVSKGIRDNERSGRARVHVSEEGTEPEAMLQVLGPKPALPAGTEDTAKEDAANRKLAKL
YKVSNGAGTMSVSLVADENPFAQGALKSEDCFILDHGKDGKIFVWKGKQANTEERKAALK
TASDFITKMDYPKQTQVSVLPEGGETPLFKQFFKNWRDPDQTDGLGLSYLSSHIANVERV
PFDAATLHTSTAMAAQHGMDDDGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNY
RHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFG
GKPMIIYKGGTSREGGQTAPASTRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPS
AAYLWVGTGASEAEKTGAQELLRVLRAQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDK
KMDAHPPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEK
TEALTSAKRYIETDPANRDRRTPITVVKQGFEPPSFVGWFLGWDDDYWSVDPLDRAMAEL
AA

>gi568815589r:121241205_121470187|GENSCAN_predicted_CDS_3|2349_bp
atggctccgcaccgccccgcgcccgcgctgctttgcgcgctgtccctggcgctgtgcgcg
ctgtcgctgcccgtccgcgcggccactgcgtcgcggggggcgtcccaggcgggggcgccc
caggggcgggtgcccgaggcgcggcccaacagcatggtggtggaacaccccgagttcctc
aaggcagggaaggagcctggcctgcagatctggcgtgtggagaagttcgatctggtgccc
gtgcccaccaacctttatggagacttcttcacgggcgacgcctacgtcatcctgaagaca
gtgcagctgaggaacggaaatctgcagtatgacctccactactggctgggcaatgagtgc
agccaggatgagagcggggcggccgccatctttaccgtgcagctggatgactacctgaac
ggccgggccgtgcagcaccgtgaggtccagggcttcgagtcggccaccttcctaggctac
ttcaagtctggcctgaagtacaagaaaggaggtgtggcatcaggattcaagcacgtggta
cccaacgaggtggtggtgcagagactcttccaggtcaaagggcggcgtgtggtccgtgcc
accgaggtacctgtgtcctgggagagcttcaacaatggcgactgcttcatcctggacctg
ggcaacaacatccaccagtggtgtggttccaacagcaatcggtatgaaagactgaaggcc
acacaggtgtccaagggcatccgggacaacgagcggagtggccgggcccgagtgcacgtg
tctgaggagggcactgagcccgaggcgatgctccaggtgctgggccccaagccggctctg
cctgcaggtaccgaggacaccgccaaggaggatgcggccaaccgcaagctggccaagctc
tacaaggtctccaatggtgcagggaccatgtccgtctccctcgtggctgatgagaacccc
ttcgcccagggggccctgaagtcagaggactgcttcatcctggaccacggcaaagatggg
aaaatctttgtctggaaaggcaagcaggcaaacacggaggagaggaaggctgccctcaaa
acagcctctgacttcatcaccaagatggactaccccaagcagactcaggtctcggtcctt
cctgagggcggtgagaccccactgttcaagcagttcttcaagaactggcgggacccagac
cagacagatggcctgggcttgtcctacctttccagccatatcgccaacgtggagcgggtg
cccttcgacgccgccaccctgcacacctccactgccatggccgcccagcacggcatggat
gacgatggcacaggccagaaacagatctggagaatcgaaggttccaacaaggtgcccgtg
gaccctgccacatatggacagttctatggaggcgacagctacatcattctgtacaactac
cgccatggtggccgccaggggcagataatctataactggcagggtgcccagtctacccag
gatgaggtcgctgcatctgccatcctgactgctcagctggatgaggagctgggaggtacc
cctgtccagagccgtgtggtccaaggcaaggagcccgcccacctcatgagcctgtttggt
gggaagcccatgatcatctacaagggcggcacctcccgcgagggcgggcagacagcccct
gccagcacccgcctcttccaggtccgcgccaacagcgctggagccacccgggctgttgag
gtattgcctaaggctggtgcactgaactccaacgatgcctttgttctgaaaaccccctca
gccgcctacctgtgggtgggtacaggagccagcgaggcagagaagacgggggcccaggag
ctgctcagggtgctgcgggcccaacctgtgcaggtggcagaaggcagcgagccagatggc
ttctgggaggccctgggcgggaaggctgcctaccgcacatccccacggctgaaggacaag
aagatggatgcccatcctcctcgcctctttgcctgctccaacaagattggacgttttgtg
atcgaagaggttcctggtgagctcatgcaggaagacctggcaacggatgacgtcatgctt
ctggacacctgggaccaggtctttgtctgggttggaaaggattctcaagaagaagaaaag
acagaagccttgacttctgctaagcggtacatcgagacggacccagccaatcgggatcgg
cggacgcccatcaccgtggtgaagcaaggctttgagcctccctcctttgtgggctggttc
cttggctgggatgatgattactggtctgtggaccccttggacagggccatggctgagctg
gctgcctga

>gi568815589r:121241205_121470187|GENSCAN_predicted_peptide_4|62_aa
MVKAINLTKSWYRSGIYHPKLLGLSREAGRKANQEHYHFNRTFYLSKVADVIVSYNGKII
VK

>gi568815589r:121241205_121470187|GENSCAN_predicted_CDS_4|189_bp
atggtcaaagcaatcaacttgacaaagtcctggtacagaagtggcatttaccacccaaag
cttctagggctttcacgagaggcaggcagaaaagccaatcaggagcactatcacttcaac
cgcacattttatctttctaaagttgcagacgtcatcgtctcctacaatggaaaaatcatc
gtgaaataa

>gi568815589r:121241205_121470187|GENSCAN_predicted_peptide_5|307_aa
MPRYISQCELLRAFPAAPGLATRTGECDCVSGSMAEKRHTRDSEAQRLPDSFKEIESPSR
LLVDIFSIVPRSQKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISF
DIPPQEILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLGTKNLS
QILSDREEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAEAEASREARAKV
IAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFPLPIDMLQGIIG
AKHSHLG

>gi568815589r:121241205_121470187|GENSCAN_predicted_CDS_5|924_bp
atgcccagatatatctcccaatgtgaacttctaagggcattcccggcggctccgggtttg
gcaacgaggacgggggagtgcgactgcgtctcgggcagcatggccgagaagcggcacaca
cgggactccgaagcccagcggctccccgactccttcaaggagatagagtccccaagcaga
ttgttagttgatattttctccatagtgcccagatcccaaaagattataaaagagtatgaa
agagccatcatctttagattgggtcgcattttacaaggaggagccaaaggacctggtttg
ttttttattctgccatgcactgacagcttcatcaaagtggacatgagaactatttcattt
gatattcctcctcaggagatcctcacaaaggattcagtgacaattagcgtggatggtgtg
gtctattaccgcgttcagaatgcaaccctggctgtggcaaatatcaccaacgctgactca
gcaacccgtcttttggcacaaactactctgaggaatgttctgggcaccaagaatctttct
cagatcctctctgacagagaagaaattgcacacaacatgcagtctactctggatgatgcc
actgatgcctggggaataaaggtggagcgtgtggaaattaaggatgtgaaactacctgtg
cagctccagagagctatggctgcagaagcagaagcgtcccgcgaggcccgcgccaaggtt
attgcagccgaaggagaaatgaatgcatccagggctctgaaagaagcctccatggtcatc
actgaatctcctgcagcccttcagctccgatacctgcagacactgaccaccattgctgct
gagaaaaactcaacaattgtcttccctctgcccatagatatgctgcaaggaatcataggg
gcaaaacacagccatctaggctag

>gi568815589r:121241205_121470187|GENSCAN_predicted_peptide_6|573_aa
MALKAKARELREECRSLRSQCDQLEERVSVMEDEMNEMKQEGKFREKRIKRNEQSLQEIW
DYVKSLNLRLIGVPESDGENGTKLENTLQDIIQENFPNLARQANIQIQRNTENATKILLE
KSNSKTHNCQIHQKIQTTIKDYYKHLYTNKLENLEEMDKFLDTYTLPRLNQEEVESLNRL
ITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELHINRTKDKNHMIISIDAEKAFDKI
QQPFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLF
NVVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLIRNFSKV
SGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPL
LNEIKEDTKKWKNIPCSWVGRINIVKMAILPKVIYRFDAIPIKLPMTFFTELEKTTLKFI
WNQKRARITKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIT
PHIYNYLTSLTNLRKTSNGERIPYLINGAGKTG

>gi568815589r:121241205_121470187|GENSCAN_predicted_CDS_6|1722_bp
atggcgctgaaagccaaggctcgagaactacgtgaagaatgcagaagcctcaggagccaa
tgcgatcaactggaagaaagggtatcagtgatggaagatgaaatgaatgaaatgaagcaa
gaagggaagtttagagaaaaaagaataaaaagaaacgaacaaagcctccaagaaatatgg
gactatgtgaaaagtctaaatctacgtctgattggtgtacctgaaagtgacggggagaat
ggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaatctagca
aggcaggccaacattcagattcagagaaatacagagaacgccacaaagatactcctcgag
aagagcaactccaagacacataattgtcagattcaccaaaaaatacaaactaccatcaaa
gactactacaaacacctctacacaaataaactagaaaatctagaagaaatggataaattc
ctcgacacatacactctcccaagactaaaccaggaagaagttgaatctctgaatagacta
ataacaggatctgaaattgtggcaataatcaatagcttaccaaccaaaaagagtccagga
ccagatggattcacagccgaattctaccagaggtacaaggaggaactgcatataaacaga
accaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacaacccttcatgctaaaaactctcaataaattaggtattgatgggacgtatctcaaa
ataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattc
aacgtagtgttggaagttctggccagggcaattaggcaggagaaggaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatcta
gaaaaccccatcgtctcagcccaaaatctccttaagctgatacgcaacttcagcaaagtc
tcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaataacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatac
ttaggaatccaacttacaagggacgtgaaggacctcttcaaggagaactacaaaccactg
ctcaatgaaataaaagaggatacaaagaaatggaagaacattccatgctcatgggtagga
agaatcaatatcgtgaaaatggccatactgcccaaggtaatttatagattcgatgccatc
cccatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcata
tggaaccaaaaaagagcccgcatcaccaagtcaatcctaagccaaaagaacaaagctgga
ggcatcacactacccgacttcaaactatactacaaggctacagtaaccaaaacagcatgg
tactggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaaataacg
ccgcatatttacaactatctgacatctttgacaaacctgagaaaaacaagcaatggggaa
aggattccctatttaataaatggtgctgggaaaactggctag

>gi568815589r:121241205_121470187|GENSCAN_predicted_peptide_7|358_aa
MWHIYTIEYYAAIKKDEFMSFAGTWMKLETIILSKLTQEQKTKHRMFSLEKIMNVKGKVI
LSMLVVSTVIIVFWEFINSSGHYNKVPQGGLSNRNLILSVLEAGESKIPSEGSSWLADGH
LLPVSTRDGEQHRRLFLVDISLKGPQDELRAGGYPREERLRESQSLPHNGKAALTQGTLR
FITRKHPEVVTVTRWKAPVVWEGTFNKAILGNYYAKQKITVRLMVFAIGRYNDHYLEEFI
TSANRYFMVGHKVIFYIMVDDVSKLPFIELGPLHSFKMFEVKPEKRWQDISMMRMKITGE
HILAHIQHEVDFLFCMDVDQVNGKQLDTHMCGTLLAGVNASFSEIGDMKCWLSNLAVP

>gi568815589r:121241205_121470187|GENSCAN_predicted_CDS_7|1077_bp
atgtggcacatatacaccatagaatactatgcagccataaaaaaggatgagttcatgtcc
tttgctgggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacag
aaaaccaaacaccgcatgttctcactcgagaaaataatgaatgtcaaaggaaaagtaatt
ctgtcaatgctggttgtctcaactgtgatcattgtgttttgggaatttatcaacagttca
ggccactataacaaagtaccacaaggtggtttaagcaacaggaatttaattctttcagtt
ctagaggctggggagtccaagatccccagtgagggctcttcctggctggcagatggccac
ctcctccctgtatccacacgtgatggagagcaacacagaaggctctttcttgtggatata
tcactcaaaggcccccaggatgagctgagggctgggggctacccaagggaggagagattg
agggagtctcagtctctgccccacaatggcaaagctgccctgactcagggaactctacgt
tttatcaccaggaaacacccagaggttgtgacagtgaccagatggaaggcgccggttgtg
tgggaaggcactttcaacaaagccatcctaggaaattattatgccaaacagaaaattacc
gtgcggttgatggtttttgctattggaagatataatgatcattacttggaggagttcata
acatctgctaataggtacttcatggttggccacaaagtcatattttacatcatggtggat
gatgtctccaagctgccgtttatagagctgggtcctctgcattccttcaaaatgtttgag
gtcaagccagagaagaggtggcaagacatcagcatgatgcgtatgaagatcactggggag
cacatcttggcccacatccaacacgaggtcgacttcctcttctgcatggatgtggaccag
gtaaatggcaagcagctggacacccacatgtgtgggacattgcttgcaggagttaatgcc
tctttctcagagataggggacatgaaatgctggttgtcaaacttggctgtaccctag