GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:57:31

Sequence gi568815591r:134342731_134559062 : 216332 bp : 43.62% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   6922   6961   40                              -2.46
 1.01 Init +   9682   9698   17  0  2   97   80    21 0.497   2.03
 1.02 Intr +  18388  18541  154  1  1   98   80    63 0.434   6.57
 1.03 Intr +  28158  28276  119  2  2   47   80    60 0.061   0.36
 1.04 Intr +  40767  40864   98  0  2   42   53    61 0.016  -2.35
 1.05 Intr +  41366  41461   96  0  0  109   32    64 0.533   2.88
 1.06 Term +  42473  42489   17  0  2  145   53    -1 0.380   0.50
 1.07 PlyA +  44192  44197    6                               1.05

 2.14 PlyA -  44853  44848    6                               1.05
 2.13 Term -  46850  46779   72  2  0  112   43    33 0.046  -0.89
 2.12 Intr -  50775  50704   72  0  0  105   63    44 0.496   3.20
 2.11 Intr -  81304  81172  133  0  1  139  105   -31 0.041   4.35
 2.10 Intr - 102590 102508   83  2  2   89  105    65 0.914   6.74
 2.09 Intr - 104651 104568   84  2  0   86  116   126 0.994  15.22
 2.08 Intr - 105331 105250   82  0  1  112   92    82 0.977  10.64
 2.07 Intr - 105763 105657  107  1  2  105   93   101 0.993  11.31
 2.06 Intr - 106389 106267  123  0  0   79   97   150 0.996  15.78
 2.05 Intr - 107067 106990   78  0  0   38   95    89 0.952   4.35
 2.04 Intr - 108172 108056  117  1  0   74   86   170 0.997  16.06
 2.03 Intr - 109013 108856  158  0  2   95   69   340 0.561  32.53
 2.02 Intr - 116054 115850  205  2  1   23   70   105 0.341   0.97
 2.01 Init - 116332 116267   66  1  0  103  100    62 0.931  10.29
 2.00 Prom - 119548 119509   40                              -3.86

 3.00 Prom + 124400 124439   40                              -2.36
 3.01 Init + 133030 133091   62  0  2  114   92     6 0.222   4.32
 3.02 Intr + 149295 149491  197  0  2  114   14   125 0.289   6.76
 3.03 Term + 159455 159612  158  0  2   57   48    83 0.516  -0.70
 3.04 PlyA + 159614 159619    6                               1.05

 4.00 Prom + 179825 179864   40                              -2.26
 4.01 Init + 185182 185247   66  0  0  107   94    83 0.915  11.88
 4.02 Intr + 187913 188080  168  1  0   80   51   359 0.987  31.54
 4.03 Intr + 189178 189294  117  0  0   79    9   111 0.864   2.96
 4.04 Intr + 190274 190351   78  1  0   78   92    89 0.633   8.05
 4.05 Intr + 193920 194042  123  2  0   53   99   163 0.934  14.68
 4.06 Intr + 194321 194427  107  1  2  100   73   142 0.929  12.91
 4.07 Intr + 194850 194931   82  0  1   96   50    60 0.995   2.64
 4.08 Intr + 195464 195547   84  1  0   62  111   100 0.963   9.72
 4.09 Intr + 196205 196287   83  1  2  116   92    44 0.895   6.04
 4.10 Intr + 206382 206519  138  0  0   65  115    16 0.133   1.58
 4.11 Intr + 208771 209030  260  1  2   41   55   148 0.566   3.91
 4.12 Intr + 209664 209897  234  1  0   81   87    88 0.433   5.66
 4.13 Intr + 210354 210442   89  1  2   56   88    51 0.299   1.59
 4.14 Intr + 211592 211660   69  1  0   30   81    74 0.406   0.28
 4.15 Term + 212542 212760  219  0  0   86   48   106 0.514   3.44
 4.16 PlyA + 215102 215107    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:134342731_134559062|GENSCAN_predicted_peptide_1|166_aa
MSKDAGVSDFRRTVTHAGGLSPGESGDPVILRIIPRGKPSFSKAEFLNGGTTDILDQEWI
PVWGQRKPGMGQRETGAGGDYHHPLWEMSAKLQVTSRKSTRDADTASMFVPPSYMLEFDP
QCWKWDLMGGQQMSSLFLVTVLGVEDTEREKTSLPSWSSQAGLPIP

>gi568815591r:134342731_134559062|GENSCAN_predicted_CDS_1|501_bp
atgagcaaggatgctggtgtctcagatttcaggagaactgtgacccatgcagggggtttg
agtcccggtgaaagtggagaccctgtcatcctgagaatcatccccagggggaaaccatct
ttttctaaggcggaatttctcaacggtggaactactgacattttggaccaggaatggatc
ccagtatggggccagaggaaacctggtatggggcagagggaaacaggtgctggaggtgac
taccatcaccctctatgggaaatgtcggccaagctgcaggtgacctccagaaagagtaca
agggatgctgatacagcttctatgtttgtccctccaagctacatgttggaatttgatccc
cagtgttggaagtgggacctaatgggaggtcaacagatgtcctctctgttcctggtcacc
gtgctaggtgtggaggacacagagagggagaagacctctctgccttcttggagctcacaa
gccggccttcctattccctga

>gi568815591r:134342731_134559062|GENSCAN_predicted_peptide_2|459_aa
MASRLLLNNGAKMPILGLGTWKGSILRVGFGSSSREPPPYRGQPLMGGPPVRILGPSGRP
KRHNARGRRGKWASQTGGPRAQTGTWSRRQGQVTEAVKVAIDVGYRHIDCAHVYQNENEV
GVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTG
FKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPG
LKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIK
AIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRN
WRVCALLRVKLWTCHSSTMPGPLHPLCLGSGCVPHLGNPSLALHKYFLNGALNSFDYVLE
TLAPENSHASKELTTQICFILTIFLFQNKKAVEVCEFAY

>gi568815591r:134342731_134559062|GENSCAN_predicted_CDS_2|1380_bp
atggcaagccgtctcctgctcaacaacggcgccaagatgcccatcctggggttgggtacc
tggaagggcagcatcctgcgagtggggtttgggagcagctcacgggagcccccgccctac
cgcgggcaacccttgatgggcggcccaccagtccgcattttgggtcctagcgggcgcccc
aagcggcacaacgcgagagggaggcggggaaagtgggcttcacagaccggtggacctcgg
gcgcagacagggacgtggagccgtcggcaagggcaggtgactgaggccgtgaaggtggcc
attgacgtcgggtaccgccacatcgactgtgcccatgtgtaccagaatgagaatgaggtg
ggggtggccattcaggagaagctcagggagcaggtggtgaagcgtgaggagctcttcatc
gtcagcaagctgtggtgcacgtaccatgagaagggcctggtgaaaggagcctgccagaag
acactcagcgacctgaagctggactacctggacctctaccttattcactggccgactggc
tttaagcctgggaaggaatttttcccattggatgagtcgggcaatgtggttcccagtgac
accaacattctggacacgtgggcggccatggaagagctggtggatgaagggctggtgaaa
gctattggcatctccaacttcaaccatctccaggtggagatgatcttaaacaaacctggc
ttgaagtataagcctgcagttaaccagattgagtgccacccatatctcactcaggagaag
ttaatccagtactgccagtccaaaggcatcgtggtgaccgcctacagccccctcggctct
cctgacaggccctgggccaagcccgaggacccttctctcctggaggatcccaggatcaag
gcgatcgcagccaagcacaataaaactacagcccaggtcctgatccggttccccatgcag
aggaacttggtggtgatccccaagtctgtgacaccagaacgcattgctgagaactttaag
gtctttgactttgaactgagcagccaggatatgaccaccttactcagctacaacaggaac
tggagggtctgtgccttgttgagagtcaaactgtggacttgccattcctccaccatgcca
gggcctctacatcccctgtgccttggctcaggctgtgtcccccacttgggcaacccaagc
ctggcactccacaagtacttcctcaatggggctctgaatagttttgactatgtcttagaa
accttggcaccagagaacagccatgcttcaaaggaattgactacacaaatttgttttatt
cttactattttcctcttccaaaataagaaagctgttgaagtctgtgagtttgcctattag

>gi568815591r:134342731_134559062|GENSCAN_predicted_peptide_3|138_aa
MPSQHMVFYGYLASVSPEPTYFSLIFTTYSSQNHFTDFFQELAKADWPMQAGGGWNFIPD
FVEPKCHCHLPTPYIYELNAASAAIQGKLTHVYPSAYVYIDVHSTMASNSESLETTQMPL
SKRLDKYIAVHIHNGLSR

>gi568815591r:134342731_134559062|GENSCAN_predicted_CDS_3|417_bp
atgcccagccagcatatggtattttatggctatttggcatcagttagtccagagcccaca
tatttcagcctcatcttcaccacctacagctctcagaaccacttcaccgatttctttcag
gaattagctaaagcagactggcccatgcaggccggtggaggctggaatttcataccagac
tttgtagaacctaagtgccactgccaccttccgactccttacatttatgaattaaatgcg
gcatcagcagccattcaagggaaacttacacatgtgtatcctagtgcctatgtgtacata
gatgttcacagtaccatggctagtaacagcgaaagcctagaaaccactcagatgcctctc
agcaagagattggataagtacattgcagtacatatacacaacggactatcaagatga

>gi568815591r:134342731_134559062|GENSCAN_predicted_peptide_4|638_aa
MATFVELSTKAKMPIVGLGTWKSPLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQ
EKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGD
DLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKP
VTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAK
HKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATILSFNRNWRACN
VLQQTAGLQGHLKTFQGSTGHCLLEGNGSTAGAPSQIQLLSPQSLVPGREGPYLKRSQKV
FPYISQLLEIAQRVFDNREFEKQKQVAQAAERAADKASKRQAKSLVAAIQEAKKEGPPSQ
STDQGTPSPHQEGQKRLANHHLPAVVELLATTLPVQVKQYPMILWAIEGINPHIQQLLQA
GILTPCEIAWNIPFLPVQKPGTNDYQPVQDLQEGYETNEGKRALTSARKAAILQIPTPTT
KRQTTQNTPQRKKNKLRIFKPVKIRKLGDLVYVKKFQKKGLTPAWKGPHTVILTTPTALK
VDGTPAWIHHSRIKKANKAQQKKWVPKPRPGPLKLRLS

>gi568815591r:134342731_134559062|GENSCAN_predicted_CDS_4|1917_bp
atggccacgtttgtggagctcagtaccaaagccaagatgcccattgtgggcctgggcact
tggaagtctcctcttggcaaagtgaaagaagcagtgaaggtggccattgatgcaggatat
cggcacattgactgtgcctatgtctatcagaatgaacatgaagtgggggaagccatccaa
gagaagatccaagagaaggctgtgaagcgggaggacctgttcatcgtcagcaagttgtgg
cccactttctttgagagaccccttgtgaggaaagcctttgagaagaccctcaaggacctg
aagctgagctatctggacgtctatcttattcactggccacagggattcaagtctggggat
gaccttttccccaaagatgataaaggtaatgccatcggtggaaaagcaacgttcttggat
gcctgggaggccatggaggagctggtggatgaggggctggtgaaagcccttggggtctcc
aatttcagccacttccagatcgagaagctcttgaacaaacctggactgaaatataaacca
gtgactaaccaggttgagtgtcacccatacctcacacaggagaaactgatccagtactgc
cactccaagggcatcaccgttacggcctacagccccctgggctctccggatagaccttgg
gccaagccagaagacccttccctgctggaggatcccaagattaaggagattgctgcaaag
cacaaaaaaaccgcagcccaggttctgatccgtttccatatccagaggaatgtgattgtc
atccccaagtctgtgacaccagcacgcattgttgagaacattcaggtctttgactttaaa
ttgagtgatgaggagatggcaaccatactcagcttcaacagaaactggagggcctgtaac
gtgttgcaacagacagctggcttacagggccacctgaagacgttccagggctccacaggc
cactgtcttctggaggggaacggatcgactgccggtgcgcccagccaaattcaactcctg
agtcctcagtctctagtcccgggaagagagggaccatatctgaagagaagccagaaagta
tttccttacatcagccagcttttagagatagcccagagagttttcgacaatcgagaattt
gaaaagcaaaaacaggtagctcaggcagctgaaagggctgcagacaaagcatcaaaaaga
caggcaaaaagcttagtggctgccatccaagaagccaaaaaggaagggcccccatcacag
agcactgaccaggggaccccgagtccccaccaggaaggccagaaacgactggcaaaccac
catctgccagctgttgtagaactcctggccaccaccctgccggtccaggtcaaacaatat
cctatgattctgtgggctatagagggaattaatcctcatattcagcaactattacaagct
ggtatactcacaccatgtgagatcgcctggaatattccatttttgccggtccagaaaccc
ggaacaaatgattaccagcctgtacaggacttgcaggaagggtatgagacaaatgaagga
aaaagggcactcaccagtgctcgaaaggcagccatccttcaaatccccactcccaccact
aagagacagactacccagaatactccccagaggaagaaaaacaagcttcggatcttcaag
ccagtaaaaatcaggaagctgggtgacctagtgtatgttaaaaagttccagaaaaaagga
ctgactcctgcctggaaaggacctcatactgtcatcctcaccacaccaacagctctgaag
gtggacggcactcctgcttggattcatcattctcgcatcaaaaaggccaacaaagcccag
caaaaaaaatgggtccccaagcctaggccaggccccttaaaactgcgcctaagttga