GENSCAN 1.0	Date run:  5-Nov-116	Time: 12:10:50

Sequence gi568815597r:182284408_182488737 : 204330 bp : 43.08% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  31953  32348  396  2  0   19   42   577 0.342  41.28
 1.02 PlyA +  35693  35698    6                               1.05

 2.00 Prom +  36772  36811   40                              -3.26
 2.01 Init +  44051  44125   75  1  0   61   53    60 0.144   0.90
 2.02 Term +  51562  51933  372  0  0  116   42   340 0.949  26.89
 2.03 PlyA +  52089  52094    6                               1.05

 3.10 PlyA -  52537  52532    6                               1.05
 3.09 Term - 100316  99998  319  1  1  100   42   623 0.999  53.25
 3.08 Intr - 101149 100950  200  1  2   54   81   164 0.986  10.45
 3.07 Intr - 101480 101353  128  0  2   82  111   144 0.950  16.50
 3.06 Intr - 101995 101849  147  2  0   73  110    84 0.996   9.31
 3.05 Intr - 102885 102724  162  1  0  100   89   209 0.999  22.15
 3.04 Intr - 104343 104165  179  2  2  117  100   191 0.989  22.76
 3.03 Intr - 106428 106090  339  2  0   17   84   201 0.630   7.19
 3.02 Intr - 107167 107060  108  0  0   87   44    99 0.488   4.80
 3.01 Init - 107508 107354  155  0  2   65   41   158 0.770   6.40
 3.00 Prom - 111242 111203   40                              -5.86

 4.02 PlyA - 112083 112078    6                               1.05
 4.01 Sngl - 115925 115257  669  2  0   85   53   517 0.923  44.08
 4.00 Prom - 119042 119003   40                              -2.46

 5.00 Prom + 121438 121477   40                              -1.66
 5.01 Init + 130943 131003   61  1  1   47   75    42 0.043   0.21
 5.02 Intr + 150925 151024  100  2  1   81   86    60 0.768   4.27
 5.03 Term + 152829 152913   85  0  1  111   50    80 0.870   3.63
 5.04 PlyA + 153451 153456    6                               1.05

 6.00 Prom + 156727 156766   40                              -5.86
 6.01 Sngl + 157512 157877  366  2  0   92   39   172 0.652   7.16
 6.02 PlyA + 158320 158325    6                               1.05

 7.00 Prom + 172874 172913   40                              -1.46
 7.01 Sngl + 183296 183664  369  1  0   71   38   206 0.855  10.01
 7.02 PlyA + 183692 183697    6                              -1.95

 8.00 Prom + 183885 183924   40                              -1.16
 8.01 Init + 186880 186979  100  0  1   94   94    17 0.727   2.14
 8.02 Intr + 187989 188150  162  1  0  101   52   163 0.992  13.95
 8.03 Intr + 189168 190135  968  1  2   86  102   596 0.936  51.54
 8.04 Intr + 203878 203940   63  0  0   89   70    44 0.003   1.61

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:182284408_182488737|GENSCAN_predicted_peptide_1|131_aa
PRQQSDSLLKKERKKQKQKKRRRRGRGRGGRRGRRRGRGRRKEEERRRRKEEEEEKKKKR
RRKEEEKKKKKKKKKKKKKKKKKKKKKKKKRKKKKRKRKEKEKEKKEKEKKKKKTTNKKP
KCLARNRVEAM

>gi568815597r:182284408_182488737|GENSCAN_predicted_CDS_1|396_bp
cctaggcaacagagtgactccctattaaaaaaagaaagaaagaagcagaagcagaagaag
agaagaagaagaggtagaggaagaggaggaagaagaggaagaagaagaggaagaggaaga
agaaaagaagaagaaagaagaagaagaaaagaagaagaagaagaaaagaagaagaaaaga
agaagaaaagaagaagaaaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaggaagaagaagaagaggaaaagaaaggag
aaggagaaggagaagaaggagaaggagaagaagaaaaagaagacgacaaacaaaaaaccg
aaatgcttggccagaaatagagtggaggccatgtga

>gi568815597r:182284408_182488737|GENSCAN_predicted_peptide_2|148_aa
MAPSRPGGAGGAIVGVNIHHSKDRKAVSTEEKESYCKFAIQNLHSFDPFADASKGDDLLP
AGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKNFACNGTVIEHPEYGEVIQP
QGDQCNNICQFLVELGLAKDDQLKVHVF

>gi568815597r:182284408_182488737|GENSCAN_predicted_CDS_2|447_bp
atggctccttcccgacctggtggagcaggaggcgccatcgtgggagtcaacatccaccac
agcaaggacagaaaggccgtttccaccgaggaaaaggaatcgtattgtaagttcgctatc
cagaacctccactctttcgacccctttgctgatgcaagtaagggtgatgacctgcttcct
gctggcactgaggattatatccatataagaattcaacagagaaatggcaggaagaccctt
actactgtccaagggattgctgatgattatgataaaaagaaactagtgaaggcatttaag
aattttgcctgcaatggtactgtaattgagcatccagagtatggagaagtaattcagcct
cagggtgaccaatgcaataacatatgccagttcctcgtagagcttggactggctaaggac
gatcagctgaaggttcatgtgttttaa

>gi568815597r:182284408_182488737|GENSCAN_predicted_peptide_3|578_aa
MAAGPGTASADRPGLLAAGSQSGHRGRPRAADKGCGAAGGSAESRVGEERSVPSPTLRPL
RPMPEIRHECSSRVLPPLVAWTRRGWRCRKSTKKATNENYEDNEKSDSSGSRSSCFGFVA
YSVNSGERSRVKIKTLTHQPACSDTPRAGRCLSPSPSPSPRKLRCLDQLESEKEERRERH
SKKRRVKEGNPNDTLDFLWLGTPSTMTTSASSHLNKGIKQVYMSLPQGEKVQAMYIWIDG
TGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTLQSEGSNSDMYLVPAAMFRDPFRKDPNK
LVLCEVFKYNRRPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFP
GPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMG
DHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIE
KLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIPRTVGQEKKG
YFEDRRPSANCDPFSVTEALIRTCLLNETGDEPFQYKN

>gi568815597r:182284408_182488737|GENSCAN_predicted_CDS_3|1737_bp
atggccgcggggcccgggaccgcatcagctgatcggcccgggctcctggccgctgggagc
caatcagggcaccgggggcggccccgggccgcggataaagggtgcggggctgctggcggc
tctgcagagtcgagagtgggagaagagcggagcgttcccagccctacgctgcggcctctc
cggcccatgcctgagatccggcatgagtgctcctcccgcgtgcttccgccgctggtggct
tggacccgtcggggctggcgctgccgcaagtccacgaagaaagcaacgaatgaaaattat
gaagacaacgagaagtcagactcctccgggtcgcgctccagctgcttcggcttcgtcgcc
tactctgtgaactccggggagagatctcgagtcaagattaagaccttaacccaccaacct
gcctgttcggacaccccccgggccggccgctgtctgtccccttctccatcgccctctccc
agaaagctccggtgcttggaccagctagagtctgagaaagaggagaggcgcgaacgccac
tccaaaaagagaagggttaaagagggcaaccctaacgatacgcttgactttctgtggctg
ggaacaccttccaccatgaccacctcagcaagttcccacttaaataaaggcatcaagcag
gtgtacatgtccctgcctcagggtgagaaagtccaggccatgtatatctggatcgatggt
actggagaaggactgcgctgcaagacccggaccctggacagtgagcccaagtgtgtggaa
gagttgcctgagtggaatttcgatggctctagtactttacagtctgagggttccaacagt
gacatgtatctcgtgcctgctgccatgtttcgggaccccttccgtaaggaccctaacaag
ctggtgttatgtgaagttttcaagtacaatcgaaggcctgcagagaccaatttgaggcac
acctgtaaacggataatggacatggtgagcaaccagcacccctggtttggcatggagcag
gagtataccctcatggggacagatgggcacccctttggttggccttccaacggcttccca
gggccccagggtccatattactgtggtgtgggagcagacagagcctatggcagggacatc
gtggaggcccattaccgggcctgcttgtatgctggagtcaagattgcggggactaatgcc
gaggtcatgcctgcccagtgggaatttcagattggaccttgtgaaggaatcagcatggga
gatcatctctgggtggcccgtttcatcttgcatcgtgtgtgtgaagactttggagtgata
gcaacctttgatcctaagcccattcctgggaactggaatggtgcaggctgccataccaac
ttcagcaccaaggccatgcgggaggagaatggtctgaagtacatcgaggaggccattgag
aaactaagcaagcggcaccagtaccacatccgtgcctatgatcccaagggaggcctggac
aatgcccgacgtctaactggattccatgaaacctccaacatcaacgacttttctgctggt
gtagccaatcgtagcgccagcatacgcattccccggactgttggccaggagaagaagggt
tactttgaagatcgtcgcccctctgccaactgcgaccccttttcggtgacagaagccctc
atccgcacgtgtcttctcaatgaaaccggcgatgagcccttccagtacaaaaattaa

>gi568815597r:182284408_182488737|GENSCAN_predicted_peptide_4|222_aa
MVLMRKQVPSRFMYPKEWQHLTMFILLTLNGCVDFMSKNVLPQRCVGLEKGTLVLIIYEL
LLLMVSHVKDSEGVELHVYSLLILVVFLLLLVLTAELWAPNMCHLQLMETFLILMMGSWL
MQAGFILYRPVSGYPWQDDDISDIMFVTTFFCWHVMINASFLLGIYGFSSFWYHCFRPSL
KLTGPKEAPYYASTPGPLYKLLQEVEQSEKEDQALLLPKSSP

>gi568815597r:182284408_182488737|GENSCAN_predicted_CDS_4|669_bp
atggtgctcatgaggaagcaagtgccatcaaggttcatgtaccccaaagagtggcagcac
ctcaccatgttcatcctcctcactcttaatggctgtgtggacttcatgagcaagaatgtg
ctgcctcagaggtgtgtgggcctagaaaaaggtaccctggtcctgatcatctacgagctc
ctgctgctgatggtgtcacatgttaaagattcagaaggggtggagctgcacgtttattct
ctgctcatcttggtggtgttcctgctgttgctggtgttgactgcagagctgtgggctccc
aacatgtgtcatctccagctgatggagacctttctgattctgatgatgggctcctggctg
atgcaggcaggctttattctatacagacccgtctctggctacccatggcaggacgatgac
atcagtgacatcatgtttgtcaccaccttcttctgctggcatgtgatgatcaatgcctca
ttcctgttgggaatctatggcttctcttccttttggtatcattgtttcagacccagcttg
aagctgactgggcccaaagaagctccatattatgcaagcactccaggacccctctacaag
ttgctacaggaagtggagcagtcagagaaagaggaccaggctctcctccttccaaagagc
tccccctga

>gi568815597r:182284408_182488737|GENSCAN_predicted_peptide_5|81_aa
MQEFEIQCRHQSLVIPSFSPFLISTPDNITERLDSVEPKIKIQLIDLPECSALPCQWYIW
LNSNNSPLLLPLDVQSDVKSS

>gi568815597r:182284408_182488737|GENSCAN_predicted_CDS_5|246_bp
atgcaggagtttgaaatacagtgccgccatcagtctttggtcatccccagctttagccca
tttctgatctctactcctgacaatatcactgagaggttagacagtgtggaaccgaaaatc
aagatccagctcatagacctgcctgagtgctcggctctcccgtgtcagtggtacatctgg
ctcaatagcaacaactccccgctcctgctacctttggacgtgcagagtgacgttaagtct
tcatag

>gi568815597r:182284408_182488737|GENSCAN_predicted_peptide_6|121_aa
MVSQNLLPKRCAALEQGAQALGMFIFLPLMVSYLQDTEGVELQSQVLLTQAMFLLTLVVT
AELWAPNMPLIWITKAFLYMITGSWLMHIGFMLFKPISGYISGWMMTEMTLCLSPPSSVG
M

>gi568815597r:182284408_182488737|GENSCAN_predicted_CDS_6|366_bp
atggtgagccagaacctgctgcccaagagatgtgctgctctggagcaaggtgcccaggct
ctgggcatgttcatatttctgcccctgatggtgtcttacctgcaggacacagaaggagtg
gagcttcagtctcaagtgctgctcacccaggccatgttcctgctgactctggtggtgacc
gcagagctgtgggctcccaacatgccactgatctggatcacgaaggcctttttgtatatg
atcacaggctcttggctgatgcacataggctttatgctgttcaaaccaatctctggctat
atcagtggatggatgatgacagaaatgacattatgtttgtcaccaccttcttctgttggc
atgtga

>gi568815597r:182284408_182488737|GENSCAN_predicted_peptide_7|122_aa
MGKDFMSKTPKAMAIKAKIDKQDLIKLKSFCTAKETTIRVNRQPTEWKKIFAIYSSDKGL
ISRIYNELKQIYKTKTNSPINKSAKAMNRHFSKEDIYVAKDNMKKCSSSLAIREMQIKTT
MR

>gi568815597r:182284408_182488737|GENSCAN_predicted_CDS_7|369_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaataaaagccaaaattgac
aaacaggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aacaggcaacctacggaatggaagaaaatttttgcaatctactcatctgacaaagggcta
atatccagaatctacaatgaactcaaacaaatttacaagacaaaaacaaacagccccatc
aacaagtcggcaaaggctatgaacagacacttctcaaaagaagacatttatgtagccaaa
gacaacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccaca
atgagataa

>gi568815597r:182284408_182488737|GENSCAN_predicted_peptide_8|431_aa
MMRWKKADQWLLQKCIGGVRGMWRFYSYLTGSAGEELVDFWILAENILSIDEMDLEVRDY
YLSLLLMLRATHLQEGSRVVTLCNMNIKSLLNLSIWHPNQSTTRREILSHMQKVALFKLQ
SYWLPNFYTHTKMTMAKEEACHGLMQEYETRLYSVCYTHIGGLPLNMSIKKCHHFQKRYS
SRKAKRKMWQLVDPDSWSLEMDLKPDAIGMPLQETCPQEKVVIQMPSLKMASSKETRISS
LEKDMHYAKISSMENKAKSHLHMEAPFETKVSTHLRTVIPIVNHSSKMTIQKAIKQSFSL
GYIHLALCADACAGNPFRDHLKKLNLKVEIQLLDLWQDLQHFLSVLLNNKKNGNAIFRHL
LGDRICELYLNEQIGPCLPLKSQTIQGLKELLPSGDVIPWIPKAQKEICKMLSPWYDEFL
DEEDYWFLLFT

>gi568815597r:182284408_182488737|GENSCAN_predicted_CDS_8|1293_bp
atgatgagatggaaaaaggcagaccagtggctactccagaaatgcattggcggggtcaga
gggatgtggcgcttctattcctacctcacaggcagtgcaggtgaagaattggtggatttc
tggatccttgctgagaacatcctgagcatagatgagatggacctggaagtgagagactac
tacctgtccctcctcctcatgctgagggccactcatctgcaggagggctccagggtggta
accctctgtaacatgaacatcaagtccctcctgaacctctccatctggcatcccaaccaa
tcaaccactaggagggagatcctgagccacatgcagaaagtggctctgttcaaactccag
agctattggcttcccaacttttacacccacaccaagatgaccatggccaaggaggaagca
tgccatggtctgatgcaagagtacgagactcgcttatacagcgtttgctacacccacata
ggagggctccctctgaacatgagcatcaagaagtgccaccactttcagaaacggtactca
agcaggaaagccaagaggaagatgtggcaattggtagatcctgactcttggtctctggaa
atggatctcaagccagatgctattggtatgcccctacaggagacatgtcctcaagagaag
gtggttatacaaatgccttccctgaaaatggcttcttcaaaggaaacaagaatcagttcc
ctggaaaaggatatgcattatgcaaaaatatccagcatggagaataaagccaagagccac
ctccacatggaagccccctttgagacaaaggtctctacccacctgaggactgtcatcccc
attgtcaatcactcctccaagatgacaattcagaaggccatcaagcaaagcttctcctta
ggatacatccacttggccttgtgtgctgatgcctgtgcagggaaccctttccgggaccac
ctgaagaagctgaatttgaaagtggagatccaacttcttgacctctggcaggacttgcag
catttcctcagtgtccttctgaataacaaaaagaatgggaatgcaatctttcgtcacttg
ctgggtgacagaatctgcgagctctacctgaatgagcagattggtccgtgcttaccactc
aaatcccaaaccattcagggcctgaaggaactattgccctctggggatgtgatcccctgg
attcccaaagcccagaaggagatttgcaagatgctcagtccctggtatgatgagtttcta
gatgaagaggactactggtttctcctttttacg