GENSCAN 1.0	Date run:  6-Nov-116	Time: 00:08:16

Sequence gi568815595r:53125759_53355942 : 230184 bp : 48.75% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -    236    151   86  2  2  106   97    31 0.255   4.42
 1.01 Init -   4642   4580   63  1  0   64   78   132 0.485   8.96
 1.00 Prom -  12343  12304   40                              -2.06

 2.00 Prom +  14035  14074   40                              -5.86
 2.01 Init +  16489  16604  116  0  2   51   77    83 0.363   1.99
 2.02 Intr +  18339  18404   66  0  0   97   89    44 0.543   3.42
 2.03 Intr +  24079  24308  230  1  2   49   81   101 0.085   3.01
 2.04 Intr +  31013  31197  185  0  2   23   94    61 0.104  -0.29
 2.05 Intr +  35578  35670   93  0  0   59  107    31 0.330   2.26
 2.06 Intr +  39346  39457  112  0  1  134   91    -2 0.273   4.65
 2.07 Intr +  40304  40364   61  0  1   59   65    46 0.073  -2.81
 2.08 Intr +  52646  52779  134  2  2   81   96   289 0.224  29.29
 2.09 Intr +  53819  54018  200  0  2  105   82   332 0.999  33.37
 2.10 Intr +  55449  55509   61  2  1   85   86    83 0.988   6.11
 2.11 Intr +  55686  55848  163  1  1   68   85   215 0.957  18.23
 2.12 Intr +  55943  55974   32  2  2  107   88    46 0.940   4.27
 2.13 Intr +  57179  57232   54  0  0  107   60    28 0.428   0.85
 2.14 Intr +  57363  57448   86  1  2   72   47   162 0.999  10.04
 2.15 Intr +  57694  57823  130  0  1   62  100   195 0.570  18.37
 2.16 Intr +  59116  59216  101  2  2  109   80   124 0.998  13.53
 2.17 Intr +  59846  59942   97  1  1  102   67    33 0.981   2.18
 2.18 Intr +  60169  60269  101  2  2   52  100   201 0.987  17.53
 2.19 Intr +  60409  60582  174  0  0  109   44   306 0.736  28.44
 2.20 Intr +  60846  60937   92  2  2  120   75   162 0.662  16.89
 2.21 Intr +  62962  63100  139  1  1  119   83   266 0.805  29.67
 2.22 Intr +  63300  63488  189  2  0  107   44   341 0.877  31.38
 2.23 Intr +  64115  64243  129  1  0   65   68    85 0.971   5.09
 2.24 Term +  66350  66508  159  1  0   82   51   286 0.994  22.24
 2.25 PlyA +  66861  66866    6                              -0.45

 3.03 PlyA -  66927  66922    6                               1.05
 3.02 Term -  67662  67659    4  2  1  142   48     0 0.014  -2.22
 3.01 Init -  73617  73496  122  0  2  103   27   133 0.169   6.36
 3.00 Prom -  95683  95644   40                              -1.96

 4.16 PlyA -  95706  95701    6                               1.05
 4.15 Term -  99218  99021  198  2  0  114   53    84 0.276   4.90
 4.14 Intr - 100173 100025  149  1  2  158   40   185 0.840  20.65
 4.13 Intr - 101120 100998  123  0  0  129  116   233 0.999  30.76
 4.12 Intr - 102391 102298   94  1  1  120  100   174 0.999  21.34
 4.11 Intr - 102601 102518   84  1  0   80   86   176 0.975  16.62
 4.10 Intr - 103379 103249  131  0  2   73  100   116 0.999  11.71
 4.09 Intr - 103678 103522  157  1  1  123  109   302 0.999  35.38
 4.08 Intr - 104863 104699  165  1  0   94   78   452 0.999  44.96
 4.07 Intr - 105792 105599  194  1  2   75   82   253 0.991  22.61
 4.06 Intr - 107516 107398  119  1  2   94   60   248 0.985  22.71
 4.05 Intr - 109416 109225  192  2  0   90   79   244 0.924  22.31
 4.04 Intr - 114590 114493   98  2  2   80   92   207 0.995  19.11
 4.03 Intr - 115487 115374  114  2  0  117  131   159 0.999  23.74
 4.02 Intr - 116484 116367  118  2  1   75  116   179 0.929  19.87
 4.01 Init - 130184 130078  107  2  2  108   92   147 0.946  16.79
 4.00 Prom - 144240 144201   40                              -4.86

 5.08 PlyA - 145873 145868    6                               1.05
 5.07 Term - 155696 155454  243  2  0   51   48   141 0.656   2.30
 5.06 Intr - 165098 165033   66  2  0   34  107    79 0.861   3.50
 5.05 Intr - 167069 166311  759  2  0   91   95   131 0.880   5.77
 5.04 Intr - 186621 186483  139  2  1   98   72   229 0.738  22.77
 5.03 Intr - 193715 193649   67  0  1   63   80    51 0.175  -0.24
 5.02 Intr - 212387 212333   55  2  1   70   85    52 0.079   1.65
 5.01 Init - 221759 221625  135  2  0   83   92   187 0.892  18.83

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 148045 148137   93  0  0   85   86    80 0.806   7.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:53125759_53355942|GENSCAN_predicted_peptide_1|50_aa
MGSQEVLGHAARLASSGLLLQVLFRLITFVLNAFILRFLSKEIVGVVNVS

>gi568815595r:53125759_53355942|GENSCAN_predicted_CDS_1|150_bp
atgggcagccaggaggtgctgggccacgcggcccggctggcctcctccggtctcctcctg
caggtgttgtttcggttgatcacctttgtcttgaatgcatttattcttcgcttcctgtca
aaggaaatcgttggcgtagtaaatgtaagn

>gi568815595r:53125759_53355942|GENSCAN_predicted_peptide_2|967_aa
MPPFPKAVINISVLTAPTAPQEHLDLYMRDLILQENPPSVPICSVEELASLVQEGPGKRP
RDFQGRACQCSWVQGAPEVQANPMQLNFWPLLYGGWGLKKPRNMQSLRLLSAVSGHSDVN
TGNLVFTEYLLCTRPSQVSPSQPANLEQPPFSSGPPPTLFPMGQAGFGELSSEDVGDEGL
RGGSGELRHPQARERKERQSAPRRTPSARAGERRPRRCRRDPWRLPLQREVCRELARQGG
RPVSPGGWCVVAAAGARTKDKQELGAPGVLPEQTLTANPTGCYAPIGLPTAGPTMAPFLR
IAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEG
RVIQIVLMRAAEEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQAKVLMSVQYFLEDVD
CKQSMRSEDEAKFPTMNRRGAIKQAKIHYIKNHEFIATFFGQPTFCSVCKDFVWGLNKQG
YKCRRSSFEGWQEEDSSAGPLRECNAAIHKKCIDKIIGRCTGTAANSRDTIFQKERFNID
MPHRFKVHNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCGINQKLLA
EALNQVTQRASRRSDSASSEPVGIYQGFEKKTGVAGEDMQDNSGTYGKIWEGSSKCNINN
FIFHKVLGKGSFGKVLLGELKGRGEYFAIKALKKDVVLIDDDVECTMVEKRVLTLAAENP
FLTHLICTFQTKDHLFFVMEFLNGGDLMYHIQDKGRFELYRATDLKLDNVLLDRDGHIKI
ADFGMCKENIFGESRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFH
GDDEDELFESIRVDTPHYPRWITKESKDILEKLFEREPTKRLGVTGNIKIHPFFKTINWT
LLEKRRLEPPFRPKVKSPRDYSNFDQEFLNEKARLSYSDKNLIDSMDQSAFAGFSFVNPK
FEHLLED

>gi568815595r:53125759_53355942|GENSCAN_predicted_CDS_2|2904_bp
atgcctccctttccaaaggccgtgatcaacatcagtgtcctaacagcacccactgcgccc
caggagcatctggacctttacatgcgtgatctcattcttcaagagaaccctccaagtgtg
cctatttgctccgtggaggagttggccagcctggtccaagagggccctggaaaaagaccc
agagacttccagggcagggcctgccagtgctcctgggtgcagggagccccagaagtccag
gccaaccccatgcagcttaacttttggcccttgctatatggaggctgggggctgaagaag
ccaagaaacatgcagtcactaaggttgctgagtgctgtctctgggcacagcgatgtcaac
acaggaaacctggtcttcactgagtacctgctgtgtacccggccctcacaagtcagtcct
tcccagcctgccaacctcgagcagccgcctttcagctcagggccaccccctacactgttt
cccatgggccaagctgggtttggtgagctgtcctctgaggatgtgggggatgaggggctg
agaggtgggagcggggagctgaggcaccctcaggccagggagcgaaaggaaaggcagtca
gcgccgcgccgaaccccgtccgcgcgcgccggggagcggcgcccccgccgctgccgccgc
gacccttggcgcctgcccctgcaacgggaggtctgcagggaactggccaggcaagggggc
aggcccgtttctcctggtggttggtgcgttgtagcagcagcgggagccaggactaaggac
aagcaggagctgggagccccaggagtgctccctgagcagaccctcacagccaaccctact
ggctgttacgcacctataggtctccccactgcaggccccaccatggcgccgttcctgcgc
atcgccttcaactcctatgagctgggctccctgcaggccgaggacgaggcgaaccagccc
ttctgtgccgtgaagatgaaggaggcgctcagcacagagcgtgggaaaacactggtgcag
aagaagccgaccatgtatcctgagtggaagtcgacgttcgatgcccacatctatgagggg
cgcgtcatccagattgtgctaatgcgggcagcagaggagccagtgtctgaggtgaccgtg
ggtgtgtcggtgctggccgagcgctgcaagaagaacaatggcaaggctgagttctggctg
gacctgcagcctcaggccaaggtgttgatgtctgttcagtatttcctggaggacgtggat
tgcaaacagtctatgcgcagtgaggacgaggccaagttcccaacgatgaaccgccgcgga
gccatcaaacaggccaaaatccactacatcaagaaccatgagtttatcgccaccttcttt
gggcaacccaccttctgttctgtgtgcaaagactttgtctggggcctcaacaagcaaggc
tacaaatgcaggcgctcctccttcgagggctggcaggaggaagactcaagcgctgggcct
ctgcgggaatgtaacgctgccatccacaagaaatgcatcgacaagatcatcggcagatgc
actggcaccgcggccaacagccgggacactatattccagaaagaacgcttcaacatcgac
atgccgcaccgcttcaaggttcacaactacatgagccccaccttctgtgaccactgcggc
agcctgctctggggactggtgaagcagggattaaagtgtgaagactgcggcatgaatgtg
caccataaatgccgggagaaggtggccaacctctgcggcatcaaccagaagcttttggct
gaggccttgaaccaagtcacccagagagcctcccggagatcagactcagcctcctcagag
cctgttgggatatatcagggtttcgagaagaagaccggagttgctggggaggacatgcaa
gacaacagtgggacctacggcaagatctgggagggcagcagcaagtgcaacatcaacaac
ttcatcttccacaaggtcctgggcaaaggcagcttcgggaaggtgctgcttggagagctg
aagggcagaggagagtactttgccatcaaggccctcaagaaggatgtggtcctgatcgac
gacgacgtggagtgcaccatggttgagaagcgggtgctgacacttgccgcagagaatccc
tttctcacccacctcatctgcaccttccagaccaaggaccacctgttctttgtgatggag
ttcctcaacgggggggacctgatgtaccacatccaggacaaaggccgctttgaactctac
cgtgccacggacctcaaactggacaatgtgctgctggaccgggatggccacatcaagatt
gccgactttgggatgtgcaaagagaacatattcggggagagccgggccagcaccttctgc
ggcacccctgactatatcgcccctgagatcctacagggcctgaagtacacattctctgtg
gactggtggtctttcggggtccttctgtacgagatgctcattggccagtcccccttccat
ggtgatgatgaggatgaactcttcgagtccatccgtgtggacacgccacattatccccgc
tggatcaccaaggagtccaaggacatcctggagaagctctttgaaagggaaccaaccaag
aggctgggagtgaccggaaacatcaaaatccaccccttcttcaagaccataaactggact
ctgctggaaaagcggaggttggagccacctttcaggcccaaagtgaagtcacccagagac
tacagtaactttgaccaggagttcctgaacgagaaggcgcgcctctcctacagcgacaag
aacctcatcgactccatggaccagtctgcattcgctggcttctcctttgtgaaccccaaa
ttcgagcacctcctggaagattga

>gi568815595r:53125759_53355942|GENSCAN_predicted_peptide_3|41_aa
MPSHCPALEPGPHPRLGRLASTTHLLEDMNSKALGFGYLPP

>gi568815595r:53125759_53355942|GENSCAN_predicted_CDS_3|126_bp
atgcccagccactgccctgctcttgagccgggtccccaccctcggctggggcggctggcc
tccaccacccacctgctggaggacatgaactctaaggccttgggctttggttatctgcca
ccgtag

>gi568815595r:53125759_53355942|GENSCAN_predicted_peptide_4|680_aa
MESYHKPDQQKLQALKDTANRLRISSIQATTAAGSGHPTSCCSAAEIMAVLFFHTMRYKS
QDPRNPHNDRFVLSKGHAAPILYAVWAEAGFLAEAELLNLRKISSDLDGHPVPKQAFTDV
ATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVA
ILDINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQAKHQPTAIIA
KTFKGRGITGVEDKESWHGKPLPKNMAEQIIQEIYSQIQSKKKILATPPQEDAPSVDIAN
IRMPSLPSYKVGDKIATRKAYGQALAKLGHASDRIIALDGDTKNSTFSEIFKKEHPDRFI
ECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAFDQIRMAAISESNINLCGSHCGVS
IGEDGPSQMALEDLAMFRSVPTSTVFYPSDGVATEKAVELAANTKGICFIRTSRPENAII
YNNNEDFQVGQAKVVLKSKDDQVTVIGAGVTLHEALAAAELLKKEKINIRVLDPFTIKPL
DRKLILDSARATKGRILTVEDHYYEGGIGEAVSSAVVGEPGITVTHLAVNRVPRSGKPAE
LLKMFGIDRDAIAQAVTALTLLTTVDFSPCCSGSAGVSPAYKVNCAKPYTGQEQTSAGGG
GLGAPATGGVPRKSSELLRG

>gi568815595r:53125759_53355942|GENSCAN_predicted_CDS_4|2043_bp
atggagagctaccacaagcctgaccagcagaagctgcaggccttgaaggacacggccaac
cgcctacgtatcagctccatccaggccaccactgcggcgggctctggccaccccacgtca
tgctgcagcgccgcagagatcatggctgtcctctttttccacaccatgcgctacaagtcc
caggacccccggaatccgcacaatgaccgctttgtgctctccaagggccatgcagctccc
atcctctacgcggtctgggctgaagctggtttcctggccgaggcggagctgctgaacctg
aggaagatcagctccgacttggacgggcacccggtcccgaaacaagctttcaccgacgtg
gccactggctccctgggccagggcctcggggccgcttgtgggatggcctacaccggcaaa
tacttcgacaaggccagctaccgagtctattgcttgctgggagacggggagctgtcagag
ggctctgtatgggaggccatggccttcgccagcatctataagctggacaaccttgtggcc
attctagacatcaatcgcctgggccagagtgacccggccccactgcagcaccagatggac
atctaccagaagcggtgcgaggccttcggttggcatgccatcatcgtggatggacacagc
gtggaggagctgtgcaaggcctttggccaggccaagcaccagccaacagccatcattgcc
aagaccttcaagggccgagggatcacgggggtagaagataaggagtcttggcatgggaag
cccctccccaaaaacatggctgagcagatcatccaggagatctacagccagatccagagc
aaaaagaagatcctggcaacccctccacaggaggacgcaccctcagtggacattgccaac
atccgcatgcccagcctgcccagctacaaagttggggacaagatagccacccgcaaggcc
tacgggcaggcactggccaagctgggccatgccagtgaccgcatcatcgccctggatggg
gacaccaaaaattccaccttctcggagatcttcaaaaaggagcacccggaccgcttcatc
gagtgctacattgctgagcagaacatggtgagcatcgcggtgggctgtgccacccgcaac
aggacggtgcccttctgcagcacttttgcagccttcttcacgcgggcctttgaccagatt
cgcatggccgccatctccgagagcaacatcaacctctgcggctcccactgcggcgtttcc
atcggggaagacgggccctcccagatggccctagaagatctggctatgtttcggtcagtc
cccacatcaactgtcttttacccaagtgatggcgttgctacagagaaggcagtggaacta
gccgccaatacaaagggtatctgcttcatccggaccagccgcccagaaaatgccatcatc
tataacaacaatgaggacttccaggtcggacaagccaaggtggtcctgaagagcaaggat
gaccaggtgaccgttatcggggctggggtgaccctgcacgaggccttggccgctgccgaa
ctgctgaagaaagaaaagatcaacatccgcgtgctggaccccttcaccatcaagcccctg
gacagaaaactcattctcgacagcgctcgtgccaccaagggcaggatcctcaccgtggag
gaccattattatgaaggtggcattggtgaggctgtgtccagtgcagtagtgggcgagcct
ggcatcactgtcacccacctggcagttaaccgggtaccaagaagtgggaagccggctgag
ctgctgaagatgtttggtatcgacagggatgccattgcacaagctgtgactgccctcaca
ctgctgaccacagtggatttctccccctgctgctcgggctcagctggggtcagccctgct
tataaggtcaactgtgcaaaaccttatactggccaagaacaaactagtgctgggggagga
gggctgggtgccccggccactggtggagtccccaggaaatcctcagagctgttgcgagga
tga

>gi568815595r:53125759_53355942|GENSCAN_predicted_peptide_5|487_aa
MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWVEKTRGSELFRNLLE
IRKVSIYSIWFYDKNDCHRIAKLMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDIL
EMLSRAKDEYERSAPSGHKHLTVEELFGTSLPKEQPAVVGLDSEEMERLPGDASQKEPNS
FLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASITQSNEKHAPTYTIPLSP
VLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPVPELSHASLIANQSPFR
APLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVASFSPAAGQLATPESFIE
PPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSSAIPKMEKALNLVEDMN
RKRVLIDSMLHQKALSLYKDLKDLLKWGHQAIYCKKGMVTQISGIQKVNSSLMLYHNAYA
ITSLLIM

>gi568815595r:53125759_53355942|GENSCAN_predicted_CDS_5|1464_bp
atggaggcgctgagtcgagctgggcaggagatgagcctagcggccctgaagcaacacgac
ccctatatcaccagcatcgcagacctcacgggccaggtcgctctgtacaccttctgcccc
aaggccaaccagtgggttgagaaaacaagaggctcagagctgtttaggaatctgctcgag
attcgcaaagtgtcgatatatagtatctggttttatgacaagaatgactgtcaccgcata
gcaaaactcatggctgatgtggtagaagaggagacacggcgatcccagcaagctgctcgg
gacaaacagagtcccagccaggccaatggctgcagcgaccacaggcccatcgacatcctg
gagatgctgagcagagccaaggatgagtatgagaggtctgctccatctggacacaagcat
ctgacggtagaagagttatttggaacctctttgccaaaggaacaaccagcagttgtgggt
ctggattcagaagaaatggagaggttgccaggagatgcctcccagaaagagcccaattca
ttcctaccatttccctttgagcagttaggaggagcccctcaatcagaaaccctgggtgtc
ccttctgctgcccaccattcagtccagcctgaaatcaccaccccggtgctaatcactcca
gcctccatcacacagtccaatgaaaagcatgctccaacctacacaatcccgttgagccct
gttctcagtcccactctgccagctgaagctcctactgcacaggttccccccagcttacct
cgaaacagcaccatgatgcaggcagtgaagaccacgcctagacagaggtctccactcctg
aaccagccagtccctgagctaagccatgccagtctgattgccaaccagagccccttcagg
gccccattgaacgtgacgaacacagctggcacatccctcccaagcgttgatcttctccag
aaactcaggttgaccccacagcatgaccaaatacagacacaaccacttgggaaaggtgca
atggtagccagcttttctccggcagctggtcagctagccacacctgagagcttcatagag
cctccctctaagacagcagcagcaagagtggcggcctcagcctccctgagcaacatggtg
cttgctccccttcagtctatgcagcagaaccaggatcctgaagtatttgtgcagcctaag
gtgttatccagtgccatcccgaagatggaaaaagcattaaatctcgtggaagacatgaac
agaaaacgtgttctgattgacagtatgttgcaccaaaaagcattgagcctatacaaagac
ctaaaagatctcttgaaatggggacaccaagccatttactgcaagaaagggatggttaca
cagatttcaggaatacagaaggtcaacagtagcctaatgctatatcacaatgcctacgcc
atcacctcacttctcatcatgtag