GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:48:46

Sequence gi568815597f:96346930_96548315 : 201386 bp : 38.26% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -     92     87    6                               1.05
 1.02 Term -   1364   1264  101  0  2   43   44   111 0.618  -0.49
 1.01 Init -   4055   3878  178  2  1   54  119    99 0.861   9.07
 1.00 Prom -  23056  23017   40                              -2.85

 2.00 Prom +  28639  28678   40                              -5.75
 2.01 Init +  30346  30436   91  0  1   78   98    93 0.991  10.00
 2.02 Term +  33301  34829 1529  2  2   67   42   429 0.099  25.85
 2.03 PlyA +  35326  35331    6                               1.05

 3.00 Prom +  35620  35659   40                              -8.05
 3.01 Init +  37612  37720  109  0  1   45   93   129 0.652   9.53
 3.02 Intr +  43721  43947  227  0  2   25   30   196 0.054   4.28
 3.03 Intr +  55742  55870  129  1  0   12  103   125 0.289   6.37
 3.04 Term +  72255  72395  141  2  0   64   44   131 0.239   3.25
 3.05 PlyA +  72438  72443    6                               1.05

 4.02 PlyA -  72580  72575    6                               1.05
 4.01 Sngl -  83880  83482  399  0  0   25   38   279 0.979  12.61
 4.00 Prom -  85828  85789   40                              -6.95

 5.02 PlyA -  86523  86518    6                               1.05
 5.01 Sngl -  88296  87202 1095  0  0   60   39   269 0.565  15.93
 5.00 Prom -  88621  88582   40                             -12.62

 6.04 PlyA -  88721  88716    6                               1.05
 6.03 Term -  89985  89189  797  1  2   26   32   391 0.620  19.75
 6.02 Intr -  91817  91675  143  1  2   41   71    91 0.164   1.78
 6.01 Init -  93039  92900  140  0  2   37   78   119 0.143   5.46
 6.00 Prom -  93785  93746   40                              -8.05

 7.00 Prom +  95473  95512   40                              -8.55
 7.01 Init + 100001 100164  164  1  2   86   29   145 0.663   7.65
 7.02 Intr + 100249 100561  313  1  1  -53  -40   382 0.582   6.56
 7.03 Term + 100637 101389  753  1  0   22   42  1011 0.725  82.35
 7.04 PlyA + 102158 102163    6                               1.05

 8.06 PlyA - 103082 103077    6                               1.05
 8.05 Term - 108228 107942  287  1  2   16   53   186 0.883   2.48
 8.04 Intr - 127123 126940  184  1  1   58   85    53 0.094   0.44
 8.03 Intr - 128231 128139   93  2  0   90   59    44 0.193   0.94
 8.02 Intr - 131493 131378  116  1  2   64   79    57 0.131   1.65
 8.01 Init - 137445 137370   76  0  1   74   69   100 0.294   8.00
 8.00 Prom - 178054 178015   40                              -5.05

 9.00 Prom + 178995 179034   40                              -4.25
 9.01 Sngl + 182045 182452  408  1  0   62   32   307 0.851  18.54
 9.02 PlyA + 182462 182467    6                               1.05

10.00 Prom + 182885 182924   40                              -3.65
10.01 Init + 198873 198936   64  2  1   64  115    50 0.382   6.66
10.02 Term + 199153 199229   77  2  2   47   48    76 0.269  -3.48
10.03 PlyA + 200368 200373    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  33240  32518  723  0  0   31   37   327 0.844  17.87


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:96346930_96548315|GENSCAN_predicted_peptide_1|92_aa
MGEDFPPVWAPENKTHKGIGISLRLDPQEFLTLKLVHTQPPSIRQLPFKCSYQLPAAAPE
KADKNISKDMEDLNNTINKSDLMGTYNSMPNN

>gi568815597f:96346930_96548315|GENSCAN_predicted_CDS_1|279_bp
atgggagaggattttcctccagtctgggcccctgaaaataaaactcacaaaggtataggg
atctccctaagactggatccccaggaatttttaactctcaagctagtccacactcaacct
ccatcaattcgtcaattaccatttaagtgttcctaccagttacctgctgcagctcctgag
aaagcagacaaaaacattagtaaggacatggaggatttgaacaacacaattaacaagtca
gatctaatgggcacctacaactctatgcccaacaattag

>gi568815597f:96346930_96548315|GENSCAN_predicted_peptide_2|539_aa
MDPNQEEIPDLPEKQSRRSVIKLIKEAPEKVLEVLVREIRQEKEIKGIQLGKEEVKLSLF
ADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFT
IASKRIKYLGIQLTRDVKDLFKQNYKLLLNEIKEDTKKWKNIQCSWIGRTNIVKMAILPK
VIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARITKSIRSQKNKAGGITLPDFKLYYK
ATVTKTAWYWYQNRDIDQWNRTEPSEITLNIYSYLIFDKPEKNKQWGKDSLFNKWCWENW
LAICRKLKLDPFLTPYTEINSRWIKDLNVRTKTIKTLEENLGITIQDIGMGKDFMSKTPK
AMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFTTYSSDKGLISRIYNELKQI
YKKKTNNPIKKWVKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTMRYHLTPVRMA
VIKMSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWQFLRDLELEIPFDPAIPLLGI

>gi568815597f:96346930_96548315|GENSCAN_predicted_CDS_2|1620_bp
atggatccaaaccaagaagaaatccctgatttacctgaaaaacaatccagaaggtcagtt
attaagctaatcaaggaggcaccagagaaagtgttggaagttctggtcagggaaattagg
caggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtccctgttt
gcagatgacatgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaag
ctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagca
ttcttatacaccaataacagacaaacagagagccaaatcatgagtgaactcccattcaca
attgcttcaaagagaataaaatacctaggaatccaacttacaagggacgtgaaggacctc
ttcaagcagaactacaaactacttctcaatgaaataaaagaggatacaaagaaatggaag
aacattcaatgctcatggataggaagaaccaatattgtgaaaatggccatactgcccaag
gtaatttatagattcaatgccatccccatcaagctaccaatgactttcttcacagaattg
gaaaaaactactttaaagttcatatggaaccaaaaaagagcccgcatcaccaagtcaatc
cgaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaag
gctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaatggaac
agaacagagccctcagaaataacgctgaatatctacagctatctgatctttgacaaacct
gagaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaaaattgg
ctagccatatgtagaaagctgaaactggatcccttccttacaccttatacagaaattaat
tcaagatggattaaagacttaaacgttagaactaaaaccataaaaaccctagaagaaaac
ctaggcattaccattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaa
gcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgc
acagcaaaagaaactaccatcagagtgaacaggcaacctacaaaatgggagaaaattttc
acaacctactcatctgacaaagggctaatatccagaatctacaatgaactcaaacaaatt
tacaagaagaaaacaaacaaccccatcaaaaagtgggtgaaggacatgaacagacacttc
tcaaaagaagacatttatgcagccaaaaaacacatgaaaaaatgctcaccatcactggcc
atcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggca
gtcattaaaatgtcaggaaacaacaggtgctggagaggatgtggagaaataggaacactt
ttacactgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcaattc
ctcagggatctagaactagaaataccatttgacccagccatcccattactgggtatatag

>gi568815597f:96346930_96548315|GENSCAN_predicted_peptide_3|201_aa
MNIVMDALKREHFYTAGRNVNQYNHYGKQCDDSLKNLDLNSPFKPPPGSVRMPNIPNTQP
AIMKPTEKHPVYTLIAKKHALAQAELKHQEEVERKDAELVIGNEKCKTSLNMRSFNQSTS
LRILKSNASAKNKRKSYGNTDRDWLVEWRLVKSLQLLEKLQVLTYCAITMTSLAVLVRLL
PAMDVVTGTIFINSCHSRINA

>gi568815597f:96346930_96548315|GENSCAN_predicted_CDS_3|606_bp
atgaatattgtcatggatgcattgaaaagggaacatttctacactgctggtaggaatgta
aaccagtacaaccactacggaaaacagtgtgatgattccttaaagaacttggatctcaac
agtcccttcaagcctccaccaggcagtgtgaggatgcctaacatacccaatacacaacca
gcaataatgaaaccaacagagaaacatccagtttatacgctgattgcaaaaaaacatgca
ttggcccaagctgaacttaaacaccaggaagaagtagaaagaaaagatgcagaattagtc
atcgggaatgagaaatgcaaaacctcactcaacatgagaagtttcaaccagagcactagc
ctccgcattctgaaatccaacgccagtgccaaaaataagaggaagagctatggtaacact
gacagagactggttggtggagtggagactagtgaagagtttacagcttttggaaaagctc
caggtcctcacgtattgtgcaataacaatgacttccttggcggttttggtacgtttattg
ccggcaatggacgttgtaacaggaacaattttcattaactcctgccactcaaggattaat
gcatga

>gi568815597f:96346930_96548315|GENSCAN_predicted_peptide_4|132_aa
MTNPQANIILNGEKSKASPPRTGTRQGCPLSPFLFNIVLEVLAKALRQEKEIKGIQIHKE
EVKLSLFADDMIVYLENPKDSSKKLLELINEFSEVSEYKINVHRSVALLYTNSDHTENQI
KNSTLFTIAAKK

>gi568815597f:96346930_96548315|GENSCAN_predicted_CDS_4|399_bp
atgacaaacccacaagccaacattatactgaatggggaaaagtcgaaagcatcccctcca
agaaccggaacaagacaaggatgcccactttcaccatttctattcaacatagtactggaa
gtcctagccaaagcactcagacaagagaaagaaataaagggcatccaaatccataaagag
gaagtcaaactatcactgtttgctgatgatatgattgtatacctagaaaaccctaaagat
tcatccaaaaagctcctggaactgataaatgaattcagtgaagtttcagaatacaaaatt
aatgtacacagatcagtagctctgctatacaccaacagcgaccatactgagaatcaaatc
aagaactcgacccttttcacaatagctgcaaaaaaataa

>gi568815597f:96346930_96548315|GENSCAN_predicted_peptide_5|364_aa
MSEPPFTIASKIIKYLQIQLTRDVKDLFKENYKPLLNKIKEDTNKWKNIPCSWIGRINIV
KMAILPKVICRFNAISTKLPITFFTELEKTTLKFIWNQKRACIAKTILSKKNKAGGIMLP
DLKLYYKATVSKTAWYWYQNRDIDQGNRIEPSEIISYIYNHLIFDKPDKNKKWGKDSLFN
KWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKD
FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNMQPTEWEKIFAIYPSDKGLISRI
YKELKQIYKKKTKQPNQKVAKGYEQTLLERRHLCSQQTREKMLILTGHQRNANQNHSEIP
SHTS

>gi568815597f:96346930_96548315|GENSCAN_predicted_CDS_5|1095_bp
atgagtgaacccccattcacaattgcttcaaagataataaaatacctacaaatccaactt
acaagggatgtgaaggacctcttcaaagagaactacaaaccactgctcaacaaaataaaa
gaggacacaaacaaatggaagaatattccatgctcatggataggaagaatcaatattgtg
aaaatggccatactgcccaaggtaatttgtagattcaatgccatctccaccaagctacca
ataaccttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcctgcattgccaagacaatcctaagcaaaaagaacaaagctggaggcatcatgttacct
gacttgaaactatactacaaagctaccgtaagcaaaacagcatggtactggtaccaaaac
agagatatagaccaagggaacagaatagagccctcagaaataatatcatacatctacaac
catctgatctttgacaaacctgacaaaaacaagaaatggggaaaggattccctatttaat
aaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttcctt
acaccttatacaaaaattaattcaagatggattaaagatttaaatgttagacctaaaacc
ataaaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggac
ttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacatgcaacct
acagaatgggagaaaatttttgcaatctacccatctgacaaagggctaatatccagaatc
tacaaagaacttaaacaaatttacaagaaaaaaaccaaacaacccaatcaaaaagtggcc
aaagggtatgaacagacacttctcgaaagaagacatttatgcagccaacagacacgtgaa
aaaatgctcatcctcactggccatcagagaaatgcaaatcaaaaccacagtgagatacca
tctcacaccagttag

>gi568815597f:96346930_96548315|GENSCAN_predicted_peptide_6|359_aa
MRKNQKNNSGNMTERVSLTPPKDHTSSPAMDPSQDEISELPEKEFRRKTGSGVDLQQIPT
DQQLMVLTVRRKTNKQKGHPHQNSICTSPSSKTKAQRCTYYKTDHIVGSKALLSKCKITE
IITNYLSDHSAIKLELRIKKLTQNCSTTWKLNNLLLNDYWVNNEMKAEIKMFFETNENKD
TTYQNLWDTFKAVCRGKFIALSAHKRKQEISKIDTLTSQLKELEKQEQTHSKASRKQEIS
KIRVELKEIETQKTLQKINESRSWFFEKINKIDRLPARLIKKKREKNQIDAIKSDKGAIT
TDPTEIQTTIREYYKQLYANKLENLEEMDKFLDTYTLPRLNQEEVESLNRPKQALKLRQ

>gi568815597f:96346930_96548315|GENSCAN_predicted_CDS_6|1080_bp
atgagaaagaaccagaaaaacaattctggtaatatgacagaacgagtttccttaacaccc
ccaaaagatcataccagctcaccagcaatggatccaagccaagatgaaatttctgaattg
ccagaaaaagaattcaggaggaaaacagggtctggagtggacctccagcaaattccaaca
gaccagcagctgatggtcctgactgttagaaggaaaactaacaaacagaaaggacatcca
caccaaaactccatctgtacgtcaccatcatcaaagaccaaagcacaacgctgtacttat
tacaaaactgaccacatagttggaagtaaagcactcctcagcaaatgtaaaataacagaa
attataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaaa
ctcactcaaaactgctcaactacatggaaactgaacaacctgctcctgaatgactactgg
gtaaataatgaaatgaaggcagaaataaaaatgttctttgaaaccaatgagaacaaagac
acaacgtaccaaaatctctgggacacatttaaagcagtgtgtagagggaaatttatagca
ctaagtgcccacaagagaaagcaagaaatatctaaaattgacaccctaacatcacaatta
aaagaactagagaagcaagagcaaacacattcaaaagctagcagaaaacaagaaataagt
aagatcagagtagaactgaaggaaatagagacacaaaaaacccttcaaaaaatcaatgaa
tctaggagctggttttttgaaaagatcaacaaaattgatagactgccagcaagactaata
aagaagaaaagagagaagaatcaaatagatgcaataaaaagtgataaaggggctatcacc
actgatcccacagaaatacaaaccaccatcagagaatattataaacaactctacgcaaat
aaactagaaaatctagaagaaatggataaattcctggacacatacactctcccaagacta
aaccaggaagaagttgaatctctgaatagaccaaaacaggctctgaaattgaggcaataa

>gi568815597f:96346930_96548315|GENSCAN_predicted_peptide_7|409_aa
MGKEKTHINIVVIGHVDSGKSTTSGHLIYKCGGIDKRTIEKLQKEAAEMGKGSFNKYYVT
IIDAPGHRDFIKNMITGTSQAGCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQL
IVDVNKMDSTEPPYSQKRYEEIVKEISTYIKKIGYNPNTGWKVTHKDGNASGTMLLEALD
CILPPTRPTDKPLRLPLQDVYKIGGIGTVLVGRVETGILKPGMVVTFAPVSVTTEVKSVE
MHHEALNEALPGDNMGFNVKNVSVKDVHRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQI
SSGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIADMVPGKPMCVE
SFSDYPPLGRFTVHDMRQTLAVGVIKAVDKKAAGAGKVTKSAQKAQKAK

>gi568815597f:96346930_96548315|GENSCAN_predicted_CDS_7|1230_bp
atgggaaaagaaaagactcatatcaacattgtcgtcattggacacgtagattcgggcaag
tccaccacttctggccatctgatctacaaatgcggtggcatcgacaaaagaacaattgaa
aaattgcagaaagaggctgctgagatgggaaagggctccttcaacaagtactatgtgact
atcattgatgccccaggacacagagacttcatcaaaaacatgattacagggacatctcag
gctggttgtgctgtcctaattgttgctgctggtgttggtgaatttgaagctggtatctcc
aagaatgggcagacccgagagcatgcccttctggcatatacactgggtgtgaaacaacta
attgttgatgttaacaaaatggattccactgagccaccctacagccagaagagatatgag
gaaattgttaaggaaatcagcacttacattaagaaaattggctacaaccccaacacagga
tggaaagtcacccataaggatggcaatgccagtggaaccatgctgcttgaggctctggac
tgcatcctaccaccaactcgtccaactgacaagcccttgcgcctgcctctccaggatgtc
tacaaaattggtggtattggtactgttcttgttggccgagtggagactggtattctcaaa
cctggtatggtggtcacctttgctccagtcagcgttacaacagaagtaaaatctgtcgaa
atgcaccatgaagctttgaatgaagctcttcctggggacaatatgggcttcaatgtcaag
aatgtgtctgtcaaggatgttcatcgtggcaacgttgctggtgacagcaaaaatgaccca
ccaatggaagcagctggcttcactgctcaggtgattatcctgaaccatccgggccaaata
agctctggctatgcacctgtattggattgccacacagctcacattgcatgcaagtttgct
gagctgaaggaaaagattgatcgccgttctggtaaaaagctggaagatggccctaaattc
ttgaagtctggtgatgctgccattgctgatatggttcctggcaagcccatgtgtgttgag
agcttctcagactatccacctttgggtcgctttactgttcatgatatgagacagacactt
gcggtgggtgtcatcaaagcagtggacaagaaggctgctggagctggcaaggtcaccaag
tctgcccagaaagctcagaaggctaaatga

>gi568815597f:96346930_96548315|GENSCAN_predicted_peptide_8|251_aa
MGHGGSVSSFERLNEALGFKKTVQRWCVTSRSFSPWNLTVALEPIQEGLQNTQAKGQCSL
DLSVVPPSYVSERSLPPHHSTGMPNPTCGLVWRKALYLSYTLPKGMKMGVSGEFTSESSL
TDSLPGITEAVSKCKSVSPIVPEFIVHQKALQWESGDRPKSKTLTTPNANEDVEQQELSL
LVGIENGIATLEDSLAVSYKTKYALSMQSSNCPPWYLPKWLKTYVHTKTCTWMSIAALCI
ISKTWKQPRYP

>gi568815597f:96346930_96548315|GENSCAN_predicted_CDS_8|756_bp
atgggtcatgggggatctgtgagtagttttgaacggctgaatgaagcattaggatttaag
aagactgtgcagagatggtgtgtgacttctagaagcttttcaccctggaatctcactgtt
gcactagagccaatccaagaaggtttacaaaacacgcaagccaaaggacaatgcagttta
gacttaagtgtggtgccccctagctatgtctctgagcggtccctaccaccccaccacagt
actggcatgcccaatcccacatgtggcctagtgtggaggaaggctttatacctctcctac
acactgcccaaggggatgaaaatgggagtcagcggggaattcacatctgagtcatctctc
accgactcactccctgggatcactgaggctgtgtctaaatgcaaaagtgtctcccccatt
gttcctgaattcattgtgcatcagaaagcattgcaatgggagtcaggagacaggccaaaa
tccaaaacactgaccacaccaaatgctaatgaggatgtggagcaacaggaactttcattg
ctcgtgggaatagaaaatggtatagccactttagaagacagcttggcagtttcttacaaa
actaaatatgctcttagcatgcaatccagtaactgccctccttggtatttacctaaatgg
ctgaaaacttatgtccacacaaaaacatgcacgtggatgtctatagcagctttatgcata
atttccaaaacttggaagcaaccaagatatccttga

>gi568815597f:96346930_96548315|GENSCAN_predicted_peptide_9|135_aa
MWESLELSRDLLNGYDQNADDDMDNEIQAELISVGDEELVGNWSKRDSCYALAKRLAAFC
PCPRDLWNFELERDDLGYLAEEISKQQTIQEVTWVLLKAFSCIKEAEHSSSENLQPDNVI
EKKNPLSEEKFKPAA

>gi568815597f:96346930_96548315|GENSCAN_predicted_CDS_9|408_bp
atgtgggaaagtttggaactctctagagacttgttgaatggctatgatcaaaatgctgat
gatgatatggacaatgaaatacaggctgagttgatctcagttggagatgaggaacttgtt
gggaattggagcaaacgtgactcttgttatgctttagcaaagagactggcagcattttgc
ccctgccctagagatttgtggaactttgaacttgagagagatgatttagggtatctggca
gaagaaatttctaagcagcaaaccattcaagaggtaacttgggtgctgttaaaggcattc
agttgtataaaggaagcagagcatagcagttcagaaaatttgcagcctgacaatgtgata
gaaaagaaaaacccactttctgaggagaaattcaagccagctgcataa

>gi568815597f:96346930_96548315|GENSCAN_predicted_peptide_10|46_aa
MGLTDPVLLTVGITDEETLNPGSLTPTCVDKATCANQTQGSFASQT

>gi568815597f:96346930_96548315|GENSCAN_predicted_CDS_10|141_bp
atgggtctgactgatccagtcctgcttacagtagggataacagatgaggagacactgaat
ccaggatcactgacacctacatgtgtggataaagctacatgtgccaaccagacccaagga
tcctttgccagccagacctaa