GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:48:44

Sequence gi568815594f:105384696_105586077 : 201382 bp : 37.06% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    545    540    6                               1.05
 1.03 Term -   1941   1921   21  0  0  132   44    16 0.128  -1.07
 1.02 Intr -  14469  14342  128  1  2  112   67   107 0.955  10.48
 1.01 Init -  15243  15201   43  0  1   85   68    43 0.815   2.63
 1.00 Prom -  19647  19608   40                              -7.15

 2.00 Prom +  20559  20598   40                              -6.75
 2.01 Sngl +  25254  25493  240  2  0   88   36   192 0.492   8.83
 2.02 PlyA +  25498  25503    6                               1.05

 3.00 Prom +  26671  26710   40                              -6.15
 3.01 Init +  27124  27324  201  0  0   60   86    92 0.310   5.12
 3.02 Intr +  30766  31092  327  0  0   24   39   200 0.180   3.67
 3.03 Term +  42605  42964  360  1  0   72   48   345 0.892  22.45
 3.04 PlyA +  43791  43796    6                               1.05

 4.00 Prom +  47854  47893   40                              -5.65
 4.01 Init +  51014  51118  105  1  0   46   55    96 0.063   2.37
 4.02 Intr +  78723  79040  318  2  0  -13   87   188 0.141   3.83
 4.03 Intr +  86051  86123   73  1  1   38  116    49 0.349   0.76
 4.04 Term +  87375  87499  125  1  2   83   54   154 0.650   9.07
 4.05 PlyA +  87723  87728    6                              -3.94

 5.04 PlyA -  87736  87731    6                               1.05
 5.03 Term -  88656  88483  174  0  0   47   41   203 0.895   8.28
 5.02 Intr -  89197  88908  290  2  2   82   49   179 0.902   9.44
 5.01 Init -  89355  89199  157  0  1   91   83   292 0.997  27.12
 5.00 Prom -  92382  92343   40                              -7.75

 6.00 Prom +  93529  93568   40                              -6.75
 6.01 Init +  93672  93735   64  2  1   68   62    49 0.752   1.66
 6.02 Intr +  99992 100774  783  0  0   -4   12   766 0.436  50.32
 6.03 Term + 100844 101385  542  0  2   29   36   726 0.704  54.93
 6.04 PlyA + 101681 101686    6                               1.05

 7.05 PlyA - 101928 101923    6                               1.05
 7.04 Term - 104956 104831  126  1  0   75   52    88 0.200   1.20
 7.03 Intr - 109301 109123  179  0  2   47  106    71 0.062   3.52
 7.02 Intr - 115999 115746  254  0  2   44    8   217 0.119   5.45
 7.01 Init - 137021 136963   59  2  2   62  111    38 0.101   4.33
 7.00 Prom - 140884 140845   40                              -3.05

 8.03 PlyA - 140956 140951    6                               1.05
 8.02 Term - 142202 141835  368  0  2   72   38   264 0.056  13.58
 8.01 Init - 152494 152176  319  1  1  100   87   119 0.762  10.55
 8.00 Prom - 157291 157252   40                              -3.05

 9.00 Prom + 162335 162374   40                              -3.95
 9.01 Sngl + 168071 168430  360  1  0   61   50   188 0.363   8.12
 9.02 PlyA + 168433 168438    6                              -0.45

10.04 PlyA - 168445 168440    6                               1.05
10.03 Term - 169188 169040  149  1  2   43   44   119 0.582   0.08
10.02 Intr - 174681 174542  140  2  2   47   97   118 0.046   7.79
10.01 Init - 181302 181184  119  0  2   35  105    83 0.712   4.42

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 131091 130765  327  0  0   84   41   116 0.810   2.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:105384696_105586077|GENSCAN_predicted_peptide_1|63_aa
MEQDSARFHQATQNDIDDVKKFKPGYLEATLNWFRLYKVPDGKPENQFAFNGEFKNKHKR
ADI

>gi568815594f:105384696_105586077|GENSCAN_predicted_CDS_1|192_bp
atggagcaggacagtgcaagatttcatcaggctactcagaatgatattgatgatgttaag
aagttcaaaccgggttacctggaagctactcttaattggtttagattatataaggtacca
gatggaaaaccagaaaaccagtttgcttttaatggagaattcaaaaacaagcacaaacgt
gcagatatctga

>gi568815594f:105384696_105586077|GENSCAN_predicted_peptide_2|79_aa
MGRKQNRKAEKSKNQSTSPLPKNCSSSPAMEQSWMENEFDEWTEVGFRRSVTTNFSELKE
HVLTHRKEAKNLEKGYTNG

>gi568815594f:105384696_105586077|GENSCAN_predicted_CDS_2|240_bp
atggggagaaaacagaatagaaaagctgaaaaatcaaaaaaccagagcacctctcctctt
ccaaagaattgcagctcctcgccagcaatggaacaaagctggatggagaatgagtttgat
gagtggacagaagtaggcttcagaaggtcagtaacaacaaacttctccgagcttaaggaa
catgttctaacccatcgcaaagaagctaaaaaccttgaaaaaggttacacaaatggataa

>gi568815594f:105384696_105586077|GENSCAN_predicted_peptide_3|295_aa
MSELPFTIATKRIKYLGIQLTRDVKDLFKENYKPLLNKIKEATNKWKNIPCSWIGRISIV
KMAILPKHPGSASTSLQNQSGERPGSSSRHFRACRGGWGLLRPPRVQGCPGPQLWLCGCS
CVQEGGDPTLPTRKGVGLPPVPGSCSPVECAALAVPPRLQPVFAAAAPDGPLLPTIDCSS
SPATEQNCMKNDFDELTKVGFRRSIITNFSELEEHVLTLCKEAKNFEKKLDEWLTRINSV
EKSLNDLMELKTTARELREAYKSFNSQFNQAQDRISVTEDQINEIKREDKIREKE

>gi568815594f:105384696_105586077|GENSCAN_predicted_CDS_3|888_bp
atgagtgaactcccattcacaattgctacaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactataaaccactgctcaacaaaataaaa
gaagccacaaacaaatggaaaaacattccatgctcatggataggaagaatcagtattgtg
aaaatggccatactgcccaagcacccaggatcggcctcgacttcactccaaaatcagagt
ggggagaggccaggcagcagtagcaggcacttccgagcctgcagaggtgggtgggggctt
ctcaggcccccgagagtgcagggatgcccaggtccacagctgtggctgtgtggctgcagc
tgtgtccaggaaggtggtgatcccaccctgccaactcggaagggggtggggctcccacct
gttcctggctcctgtagcccggtggagtgtgcagccttggctgtgcctccccggctgcag
ccagtctttgcagcagctgctccagacgggccactgctgccaacaatagattgcagctcc
tcaccagcaacagaacaaaactgcatgaagaatgactttgatgagttgacaaaagtaggc
ttcagaaggtcgataataacaaacttctccgagctagaggagcacgttctaaccctttgc
aaggaagctaaaaactttgaaaaaaagttagacgaatggctaactagaatcaacagtgta
gagaagagcttaaatgacctgatggagctgaaaaccacagcacgagaacttcgtgaagca
tacaaaagcttcaacagccaattcaatcaagcacaagacaggatatcagtgactgaagat
caaattaatgaaataaagcgagaagacaagattagagaaaaagagtga

>gi568815594f:105384696_105586077|GENSCAN_predicted_peptide_4|206_aa
MIISIDTEKARDKIQHSFMIKTFNELGTEGTYLKIHSEHKSLENLWPDNVREKKIPFFEK
KFKPAAEICISNKKPNVRPQDSDENVSSACQRPSRQPFPSQALRPSRKRWFRWAQGPSAV
CSLGSWCLASQVVQPWLKGAKQFYKITSAIPILFTEKLSYRMSSEETVRISVIHPMPSGN
TSAEKDLEDHRFKVKSFILQLKKLAL

>gi568815594f:105384696_105586077|GENSCAN_predicted_CDS_4|621_bp
atgatcatctcaatagatacagaaaaagcacgtgataaaattcaacattccttcatgata
aaaaccttcaacgaactaggcactgaaggaacatacctcaaaatacattcagagcataaa
agtttggaaaatttgtggcctgacaatgtgagagaaaagaaaatcccattttttgagaag
aaattcaagccagctgcagaaatttgcataagtaacaagaagccaaatgttcgtccccaa
gacagtgatgaaaatgtctctagcgcatgtcagaggccttcacggcagcccttcccatca
caggccctgaggcctagtaggaaaaggtggtttcgctgggctcagggtccctctgctgtg
tgcagcctagggagttggtgccttgcgtcccaggtggtccagccatggctaaaaggggcc
aagcaattctataaaattactagtgctatccccattttatttacggagaaactgagctac
cggatgtcatctgaagagactgttagaatctccgttattcatccaatgccttcagggaat
accagtgctgagaaggaccttgaggatcatcgtttcaaggtcaaaagcttcattttacag
ctgaagaaactggctctgtga

>gi568815594f:105384696_105586077|GENSCAN_predicted_peptide_5|206_aa
MSALLRLLRTGAPAAACLRLGTSAGTGSRRAMALYHTEERGQPCSQNYRLFFISSSRRFA
ERRTGETWVGDGMGDTWDAPRGLPSLFLGPSAVAARSRPPYFPRERAPSHENCQRGGGGS
RPQSGEQRRRAAGWGVDSALCPASRPPRGKLDLVRTSLHPECDPPSKASLVPEQPLFLPK
LNKPRRLSDFGGVPELPSSEKGPRSS

>gi568815594f:105384696_105586077|GENSCAN_predicted_CDS_5|621_bp
atgagcgcgctgctgcggctgctgcgcacgggtgccccagccgctgcgtgcctgcggttg
gggaccagtgcagggaccgggtcgcgccgtgctatggccctgtaccacactgaggagcgc
ggccagccctgctcgcagaattaccgcctcttctttataagtagctcccggaggttcgcc
gagcggcgcaccggagaaacctgggtgggggatggaatgggggacacttgggacgccccg
cgcggtctcccttctctctttttggggccctcagcggtagccgcgcggtccaggccacct
tacttcccgcgggagcgcgcaccgagtcacgagaactgccagcgaggaggcggcggatca
agaccccaaagcggagagcagaggcgcagggctgccggctggggggtagatagcgccctg
tgccctgccagccgccctccccgagggaagcttgacttggtacgcacaagtttacaccct
gagtgtgatccaccatccaaagcctcgttggttccggagcagccccttttcctccccaag
ctgaacaagcccagaaggctaagcgacttcgggggggtccctgagttgccgagctcagag
aaaggacccaggtcttcgtga

>gi568815594f:105384696_105586077|GENSCAN_predicted_peptide_6|462_aa
MDIKKGITDISASLRVESGWEARTRKEKTHINTVIIGHVDSGKSTTTGHLIYKCGGVDKR
TIEKFEKEAAEMGKCSFKYAWVLDKLKAEREHGITIDISLWKFETSKYYVTIIDAPGHRD
LIKNMITGTSQADCAVLIVAAGFGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDS
TEPPYSHKRYEEIVKEVSTYIKKIGHNTDTVAFVPVSGWNGDNTLEPSANMPWFKGWKVT
RKDGNASGTTLLEALDCILPPTRPTDKPLCLPLQDVYKIGGIVNVATEVKSVEMHHEALS
EVLPGDNVGFNVKNVSVKDVRRGNVAGDSKKDPPMEAAGFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKTDRHSGKKLEDGPKFLKSGDAAIVDMVPGKPVYVESFSDYPP
LGRFAVHDIRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQKAK

>gi568815594f:105384696_105586077|GENSCAN_predicted_CDS_6|1389_bp
atggacataaagaagggaataacagacatcagcgcctctttgagagtggagagtggatgg
gaagccagaacgagaaaggaaaagactcatatcaacactgtgatcatcggacacgtagat
tcgggcaagtccaccactactggccatctgatctacaaatgcggtggcgtcgacaaaaga
accatcgaaaaatttgagaaggaggctgctgagatgggaaagtgctccttcaagtatgcc
tgggtcttggataaactgaaagctgagcgtgaacatggtatcaccattgatatctctttg
tggaaatttgagaccagcaagtactatgtgactatcattgatgccccaggacacagagac
ctcatcaaaaacatgattacagggacatctcaggctgactgtgctgtcttgattgttgct
gctggttttggtgaatttgaagctggtatctccaagaatgggcagacccgagagcacgcc
cttctggcttacacactgggtgtgaaacaactaattgttggtgttaacaaaatggattcc
actgagccaccctacagccataagagatatgaggaaattgttaaggaagtcagcacttac
attaagaaaattggccacaacaccgacacagtagcatttgtgccagtttctggttggaat
ggtgacaacacgctggagccaagtgctaacatgccttggttcaagggatggaaagtcacc
cgtaaggatggcaatgccagtggaaccacgctgcttgaggctcttgactgcatcctacca
ccaactcgtccaactgacaagcccttgtgcctgcctctccaggatgtctacaaaattggt
ggtattgtcaacgttgcaacagaagtaaaatctgttgaaatgcaccatgaagctttgagt
gaagttcttcctggggacaatgtgggcttcaatgtcaagaatgtgtctgtcaaggatgtt
cgtcgtggcaacgttgctggtgacagcaaaaaggacccaccaatggaagcagctggcttc
actgctcaggtgattatcctgaaccatccaggccaaataagtgctggctatgcccctgta
ttggattgccacacggctcacattgcatgcaagtttgctgagctgaaggaaaagactgat
cgccattctggtaaaaagctggaagatggccctaaattcttgaagtctggtgatgctgcc
attgttgatatggttcctggcaagcccgtgtatgttgagagcttctcagactatccacct
ttgggtcgctttgctgttcatgatatcagacagacagttgcggtgggtgtcatcaaagca
gtggacaagaaggctgctggagctggcaaggtcaccaagtctgcccagaaagctcagaag
gctaaataa

>gi568815594f:105384696_105586077|GENSCAN_predicted_peptide_7|205_aa
MDTNMETIDTGYSKSKEGASPILEVRSASAWLPPHLGGEERLCLATVQSSKCEVTAFVQV
YPTAPKRQRPSRMGHDDDGGFVEKKRGKCGEKKERSDCYCVCVESQKLLKLISHFIKDSG
YKINVQKSLRFLYTNNSQAESQIINELPFAIATKKIIPRNTDNKPWRQEHIVCIGPYARM
EMGIKESATPFKDKEHQRLMTGESL

>gi568815594f:105384696_105586077|GENSCAN_predicted_CDS_7|618_bp
atggacacgaatatggaaacaatagatactgggtactccaaaagtaaggagggagccagc
cccatcttggaagtgaggagtgcctctgcctggctgccaccccatctgggaggtgaggag
cgcctctgcctggccactgtgcaatcctccaagtgtgaagtgacagcctttgtgcaggtg
tacccaacagctccgaagagacagcgaccatcgagaatgggccacgatgacgatggcggt
tttgttgaaaagaaaagggggaaatgtggggaaaagaaagagagatcagattgttactgt
gtctgtgtagaaagccaaaagcttcttaagctgataagccacttcatcaaagactcagga
tacaaaataaacgtgcaaaagtccctaagattcctatataccaacaacagtcaagcagag
agccaaatcatcaatgaacttccatttgcaattgccacaaagaagataatacctaggaat
acagataacaaaccctggagacaagagcatatagtttgcattggaccatatgctagaatg
gaaatggggataaaagaatcagcaaccccattcaaagataaggagcaccagagactgatg
actggggaatcactgtga

>gi568815594f:105384696_105586077|GENSCAN_predicted_peptide_8|228_aa
MVLASAQLLGRPQETYNHGGRQRESWHFTWPEQEEESGEKVLHTFKQPHLMRTNSRHENS
TEWNGVKPFTRNHLHDPITTHQAPPPTLGFTIQHEIWIGTQIQTISGSPAHPVRLSRREA
AFRSPYSSTEPLCSPSESDSDRGTSGAGTQHLQKLSQELDEAIMAEESDDMTVSLIHHGG
SALQFCSAGNKTCLTTEASYPRMSVLPMSFLEEPPRSHQYPWAMLTRT

>gi568815594f:105384696_105586077|GENSCAN_predicted_CDS_8|687_bp
atggtgctggcatctgctcagcttctggggaggcctcaggaaacttacaatcatggtgga
aggcaaagggagagctggcacttcacatggccagagcaggaggaagagagtggtgagaag
gtgctacacacttttaaacaaccacatctcatgagaacgaactcacgtcatgagaacagc
actgagtggaatggtgttaaaccattcacgagaaaccacctccatgatccaatcaccacc
caccaggctccacctccaacactggggtttacaattcaacatgagatttggatagggaca
cagatccaaacaatatcaggctcacctgcccacccagtaaggttgtcgaggcgggaggct
gccttccggagcccctactcctcaacagagcccctctgctctcccagtgagtctgacagt
gaccgagggacgtcgggggcgggaactcagcatctccagaagctctcccaagagctggac
gaagctattatggcggaagagagtgatgacatgaccgtctctctcattcaccacggagga
agtgccctgcagttctgttctgcaggaaacaagacctgtctgaccaccgaggcttcatac
ccaaggatgtctgtgcttccaatgagcttcctggaggaaccccccaggagtcatcagtac
ccctgggccatgctaacaaggacctga

>gi568815594f:105384696_105586077|GENSCAN_predicted_peptide_9|119_aa
MEPKEATGKENMVTKKKNLAFLRSRLYMLERRKTDTVVESSVSGDHSGTLRRSQSDRTEY
NQKLQGNQKEINCPSYCTPSSISATFPIAKKTHKAEGKIEYHLSFPQNKKMKVNVTYKL

>gi568815594f:105384696_105586077|GENSCAN_predicted_CDS_9|360_bp
atggagcccaaagaagccactgggaaagaaaacatggtcaccaagaaaaagaatctggcc
ttcttgaggtctagactctatatgctggagagaaggaagactgacactgtggttgagagc
agtgtttctggggaccactctggcaccttgaggaggagccaatctgacaggaccgaatac
aaccagaaattacaaggtaaccaaaaagaaatcaattgtcccagttactgcactcccagc
tccatttctgctacgtttccaattgcaaagaaaacacacaaggcagaggggaaaattgaa
taccacctctccttcccacaaaataagaagatgaaagtaaatgtgacctataaattatag

>gi568815594f:105384696_105586077|GENSCAN_predicted_peptide_10|135_aa
MDSPVTRGKKEGVKLSLIAKKIERTEQIKGNSRGEISMNWPKSMHTSNHSLPLRAWDKKR
SKQMLEPVLRPVEQKIPQSQKQSRSEVFKSKTTAHSGMMRVQTHLVLKAGEASSGGPHNK
YRRKDLKCCPISTSK

>gi568815594f:105384696_105586077|GENSCAN_predicted_CDS_10|408_bp
atggacagtccagtcactaggggaaagaaggagggagttaagcttagtctaattgccaag
aagatagaaagaacagagcagatcaagggaaattcaagaggtgaaattagcatgaactgg
cctaagagcatgcacaccagcaaccacagtctgcccttgagagcatgggataagaagcgg
tccaagcaaatgttggagccagtactgaggcctgttgaacagaaaattccacagtctcag
aaacagtctagaagtgaagtttttaaatccaaaacgacagctcacagtgggatgatgaga
gttcagacacaccttgtgctaaaagcaggagaggcaagttctggaggaccacataacaag
taccgaagaaaagacttaaaatgctgcccaatatcaacatcaaaatga