GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:48:42

Sequence gi568815593r:14551941_14753326 : 201386 bp : 43.56% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  15294  15471  178  2  1   68   44    85 0.006   1.59
 1.02 Intr +  25208  25319  112  0  1   83   48    70 0.000   1.94
 1.03 Intr +  29075  29198  124  2  1   15  105    55 0.001   0.49
 1.04 Intr +  29859  30018  160  2  1   52   99    86 0.108   5.66
 1.05 Intr +  49025  49184  160  0  1   75   78   102 0.384   6.95
 1.06 Intr +  49273  49304   32  1  2  122   33     8 0.259  -3.53
 1.07 Intr +  49411  49502   92  2  2   56   93     9 0.193  -2.09
 1.08 Intr +  50243  50392  150  1  0   83   95    44 0.271   4.96
 1.09 Intr +  55390  55518  129  0  0   35  111    91 0.338   6.99
 1.10 Intr +  56808  57077  270  2  0   63   91   129 0.933   8.44
 1.11 Term +  58201  58374  174  0  0  117   41   143 0.998  10.26
 1.12 PlyA +  58427  58432    6                               1.05

 2.00 Prom +  62351  62390   40                              -2.46
 2.01 Init +  62640  62825  186  2  0   84   30   149 0.973   7.76
 2.02 Term +  63414  63569  156  2  0   70   35   108 0.664   1.63
 2.03 PlyA +  63605  63610    6                               1.05

 3.04 PlyA -  64738  64733    6                               1.05
 3.03 Term -  71992  71989    4  0  1  117   45     0 0.003  -5.02
 3.02 Intr -  80851  80803   49  2  1  118   97    13 0.069   2.94
 3.01 Init -  87827  87629  199  2  1   77   99   150 0.310  14.07
 3.00 Prom -  88038  87999   40                              -4.06

 4.02 PlyA -  88262  88257    6                              -0.45
 4.01 Sngl -  88878  88348  531  0  0   50   42   334 0.473  21.07
 4.00 Prom -  95482  95443   40                              -4.86

 5.02 PlyA -  95987  95982    6                               1.05
 5.01 Sngl - 101386  99998 1389  1  0   86   42  1458 0.999 137.08
 5.00 Prom - 102591 102552   40                              -4.96

 6.00 Prom + 108915 108954   40                              -6.16
 6.01 Init + 112901 113037  137  1  2   73   73   245 0.941  19.12
 6.02 Intr + 124690 124741   52  1  1   64   71     7 0.013  -4.49
 6.03 Intr + 129524 129667  144  1  0   81   80   173 0.863  16.28
 6.04 Intr + 135581 135706  126  1  0   69   42   127 0.977   7.08
 6.05 Intr + 138099 138368  270  2  0   55  111   154 0.935  12.14
 6.06 Intr + 140914 141088  175  0  1   95   28   293 0.626  23.51
 6.07 Intr + 145559 145601   43  0  1   73   76    67 0.025   1.30
 6.08 Intr + 153671 153779  109  2  1   54   74    81 0.112   3.59
 6.09 Intr + 155990 156190  201  1  0   45   95    71 0.757   2.98
 6.10 Term + 156624 156806  183  2  0   63   48   131 0.985   4.14
 6.11 PlyA + 157313 157318    6                              -0.45

 7.14 PlyA - 157717 157712    6                               1.05
 7.13 Term - 159370 159257  114  1  0   53   48   141 0.985   5.17
 7.12 Intr - 161033 160934  100  1  1   92   94   135 0.999  14.61
 7.11 Intr - 161727 161604  124  1  1   82   63   195 0.967  16.04
 7.10 Intr - 164895 164766  130  0  1  120  103   131 0.991  18.07
 7.09 Intr - 166000 165920   81  1  0   88   33    72 0.738   1.53
 7.08 Intr - 166448 166367   82  1  1   82  111     8 0.549   2.14
 7.07 Intr - 169506 169430   77  0  2   75   37   123 0.880   4.21
 7.06 Intr - 175770 175576  195  0  0   92   87    47 0.842   4.61
 7.05 Intr - 181998 181849  150  0  0   28   40   105 0.054   0.06
 7.04 Intr - 189982 189887   96  1  0  115  103   139 0.981  18.31
 7.03 Intr - 194022 193930   93  0  0  130  100    90 0.998  14.56
 7.02 Intr - 197366 197232  135  2  0  100   64    60 0.865   5.56
 7.01 Intr - 199299 199129  171  0  0  141   71   193 0.901  23.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:14551941_14753326|GENSCAN_predicted_peptide_1|526_aa
FRSRFHIFGYLFGNAPLYWYRFTVLVHFHAADKDLPETGKKKRLNWTYSSTWLGRPQNHA
LVPTLAALEEAFSLPLHCGSPSLGWQRPELTPSACRSQFVSGTVYIGEKGSVQQDFHFLH
FSSGKGPSDRQSAGENNKGSEPGRRRAAVASDRPLQTTGRGPAPVRSAAGMAATRSPTRA
RERERSGAPAAGSDQVHSWMLATSQALDTVWRMAKGFVMLAVSFLVAAICYFRRLHLYSG
HKLKWWIGYLQRKFKRNLSVEAEVDLLSYCAREWKGETPRNKLMRKAYEELFWRHHIKCV
RQVRRDNYDALRSVLFQIFSQGISFPSWMKEKDIVKLPEKLLFSQGCNWIQQYSFGPEKY
TGSNVFGKLRKYVELLKTQWTEFNGIRDYHKRGSMCNTLFSDAILEYKLYEALKFIMLYQ
VTEVYEQMKTKKVIPSLFRLLFSRETSSDPLSFMMNHLNSVGDTCGLEQIDMFILGYSLE
VKIKVFRLFKFNSRDFEVCYPEEPLRDWPEISLLTENDRHYHIPVF

>gi568815593r:14551941_14753326|GENSCAN_predicted_CDS_1|1581_bp
ttccgaagtcgattccacattttcggatatctttttggcaatgccccactctactggtac
cgatttactgtattagtccattttcatgctgctgataaagacttacctgagactgggaag
aaaaagaggcttaattggacttacagttccacatggctggggaggcctcagaatcatgcc
ttggtgcccactctggccgcgcttgaggaggccttcagcctgccgctgcactgtgggagt
ccctctctgggctggcagaggccggagctgactccttctgcttgccggagtcagtttgtc
tctggaactgtgtatattggagaaaaaggaagtgttcaacaggattttcattttcttcat
ttttcttctggaaaaggcccatctgaccggcagagtgcgggggagaacaacaagggaagc
gagcccgggcgccggcgggcggccgtcgcgtctgacagaccactgcagaccacgggccga
ggcccagcgcccgtccgcagcgcggccggcatggcggcgacaaggagccccacgcgggca
agggagcgggagcggtctggcgctcccgccgcaggaagtgaccaagttcactcctggatg
ctagctacaagccaagccttagacactgtctggagaatggcaaaaggctttgtgatgttg
gcagtttcatttctggtggctgccatctgctacttccggaggctacatttatattcaggg
cacaagctgaaatggtggattggatatctgcagagaaaattcaaaaggaacctcagtgtg
gaggcagaggttgatttactcagttattgtgcaagagaatggaaaggagagacaccccgt
aacaagctgatgaggaaggcttatgaggagctattttggcggcatcacattaaatgtgtt
cgacaagtaaggagagataactatgatgctctcagatcagtgttatttcagatattcagc
cagggcatctcttttccatcatggatgaaagaaaaggacattgttaagcttcctgaaaaa
ctgctgttttcacaaggttgtaattggattcagcagtacagttttggtcctgagaagtat
acaggctcgaatgtgtttggaaaactacggaaatatgtggaattattgaaaacacagtgg
actgaatttaatggcattagagattatcacaagagaggaagtatgtgcaacacccttttt
tcagatgccattctggaatataaactttatgaagctttaaagttcatcatgctgtatcaa
gtcactgaagtttatgaacaaatgaagactaaaaaggtcattcccagtctttttagactc
ctgttttccagggagacatcctctgatcctttgagcttcatgatgaatcacctgaattct
gtaggcgacacatgtggactagagcagattgatatgtttatacttggatactcccttgaa
gtaaagataaaagtgttcagactgttcaagtttaactccagagactttgaagtctgctac
ccagaggagcctctcagggactggccggagatctccctgctgaccgagaacgaccgccac
taccacattccagtcttttaa

>gi568815593r:14551941_14753326|GENSCAN_predicted_peptide_2|113_aa
MVYKWTEKHSLTYSATYGLECSVEQPEVYTMSLHLKLMECVGGDSSSMWEQCGPRASMEE
GCHVPGLPLGAGFSAGLRFMERTPGQGEEKQLVQTDDEGEDQKSCLGVVEVSV

>gi568815593r:14551941_14753326|GENSCAN_predicted_CDS_2|342_bp
atggtttataagtggacagaaaaacactcactcacgtattcagccacgtatggtctggag
tgctctgtagaacagcccgaagtgtacaccatgtctctgcacttgaagctcatggaatgt
gttggaggagactcaagctccatgtgggaacagtgtggcccaagagccagcatggaggag
ggctgtcatgtacctggacttcctttgggtgccggcttttctgctggactaagattcatg
gaaagaaccccagggcaaggtgaggagaagcagctggtacagactgatgacgaaggagag
gaccagaaaagctgcttgggtgtggtggaagtttcagtgtaa

>gi568815593r:14551941_14753326|GENSCAN_predicted_peptide_3|83_aa
MAEALIKYKPSVKGRAQLGVQAFADVLLIIPKVLDQNSGFDLQETLVKIQAECSESGQLV
GVDLDTGVIIIASEFPKSFVKSR

>gi568815593r:14551941_14753326|GENSCAN_predicted_CDS_3|252_bp
atggcagaagccctgattaaatataagcccagtgtaaagggcagggcacagcttggagtc
caagcatttgctgatgtgttgctcattattccaaaggttcttgatcagaactctggtttt
gaccttcaggaaacattagttaaaattcaagcagaatgttcagaatcaggtcagcttgtg
ggtgtggacctggatacaggtgtcatcataattgctagtgagtttcccaaaagctttgtg
aagtccagatga

>gi568815593r:14551941_14753326|GENSCAN_predicted_peptide_4|176_aa
MQIQHTTASLIAKVATAQDDITGDSTTSNVLIIEKLLKQEDLYISEGLHLRIITEGFEAA
KEKALRFLEEVKIRKEMDRETLINVARTSLHTKVHAELADALTEAVVDSILAIKRQDEPI
DLFMVVIMEMKHKSETDTSLIRGLVLDHGAWHPDMKKRVEDVYILKCNVSLEYEKT

>gi568815593r:14551941_14753326|GENSCAN_predicted_CDS_4|531_bp
atgcaaattcaacacacaacagcttccttaatagcaaaggtagcaacagcccaggatgat
ataactggtgatagtacaacttccaatgtcctaatcattgaaaagctactgaaacaggag
gatctctacatttctgaaggccttcatctcagaataattactgaaggatttgaagctgca
aaggaaaaggcccttcggtttttggaagaagtcaaaataaggaaagagatggacagggaa
acacttataaatgtggccagaacatctcttcatactaaagttcatgctgaacttgcagat
gccttaacagaggctgtagtggactccattttggccattaaaagacaagatgaacctatt
gatctcttcatggttgtgatcatggagatgaaacataaatctgaaactgatacaagctta
atcagagggcttgttttggaccacggagcatggcatcctgatatgaagaaaagggtggag
gatgtatacattctcaagtgtaacgtgtcattagaatatgaaaaaacataa

>gi568815593r:14551941_14753326|GENSCAN_predicted_peptide_5|462_aa
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCSSIDKRTIEKFEKETAEMGKGSFKYGWVL
DKLKAERERGITIDISLWKFETSKYYVTITDAPGHRDFIKNMITGTSQADCAVPIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGNNMLEPSANMPWFKGWKVTRKDGNASGTMLLEALDCILPPTR
PTDKPLRLPLQDVYKIGGIGSVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALG
EALPGDSVGFHVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCAESFSDYPP
LGRFAVRDMRHTVAVGVIKAVDKKAAGAGKVTNSAQKAQMAK

>gi568815593r:14551941_14753326|GENSCAN_predicted_CDS_5|1389_bp
atgggaaaggaaaagactcatatcaacattgtcgtcattggacacgtagattcgggcaag
tccaccactactggccatctgatctataaatgcagtagcatcgacaaaagaaccattgaa
aaatttgagaaggagactgctgagatgggaaagggctctttcaagtatggctgggtcttg
gataaactgaaagctgagcgtgaacgtggtatcaccattgatatctccttgtggaaattt
gagaccagcaagtactatgtgactatcactgatgctccaggacacagagacttcatcaaa
aacatgattacagggacatctcaggctgactgtgctgtcccgattgttgctgctggtgtt
ggtgaatttgaagctggtatctctaagaatgggcagacccgagagcatgcccttctggct
tacacactgggtgtgaaacaactaattgttggtgttaacaaaatggattccactgagcca
ccctacagccagaagagatatgaggaaattgttaaggaagtcagcacttacattaagaaa
attggctacaaccccgacacagtagcatttgtgccaatttctggttggaatggtaacaac
atgctggagccaagtgctaacatgccttggttcaagggatggaaagtcacccgtaaggat
ggcaatgccagtggaaccatgctgcttgaggctctggactgcatcctaccaccaactcgt
ccaactgacaagcccttgcgcctgcctctccaggatgtctacaaaattggtggtattggt
agtgttcctgttggccgagtggagactggtattctcaaacccggtatggtggtcaccttt
gctccagtcaacgttacaacagaagtaaaatctgtcgaaatgcaccatgaagctttgggt
gaagctcttcctggggacagtgtgggcttccatgtcaagaatgtgtctgtcaaggatgtt
cgtcgtggcaacgttgctggtgacagcaaaaatgacccaccaatggaagcagctggcttc
actgctcaggtgattatcctgaaccatccaggccaaataagcgctggctatgcccctgta
ttggattgccacacggctcatattgcatgcaagtttgctgagctgaaggaaaagattgat
cgccgttctggtaaaaagctggaagatggccctaaattcttgaagtccggtgatgctgcc
attgttgatatggttcctggcaagcccatgtgtgctgagagcttctcagactatccacct
ttgggtcgctttgctgttcgtgatatgagacacacagttgcggtgggtgtcatcaaagca
gtggacaagaaggctgctggagctggcaaggtcaccaactctgcccagaaagctcagatg
gctaaatga

>gi568815593r:14551941_14753326|GENSCAN_predicted_peptide_6|479_aa
MPQPEAWPGASCAETPAREAAATARDGGKAAASGQPRPEMQCPAEQSCLGVHRNEDCREE
SRKGYEEVSQKFTSIRRVRGDNYCALRATLFQAMSQAVGLPPWLQDPELMLLPEKLISKY
NWIKQWKLGLKFDGKNEDLVDKIKESLTLLRKKWAGLAEMRTAEARQIACDELFTNEAEE
YSLYEAVKFLMLNRAIELYNDKEKGKEVPFFSVLLFARDTSNDPGQLLRNHLNQVGHTGG
LEQVEMFLLAYAVRHTIQVYRLSKYNTEEFITVYPTDPPKDWPVVTLIAEDDRHYNIPVR
VCYIEIYYQECRNGFCFRQFPDQYIIKQPKYLIKSKEQRICHCKACGCGSPGKCKQVAFC
APFKESQTGEFPANVQIRQYSLSHVAGRSNPTVTFQAQASSSSFCSVVVSLTPFATEIPL
DDGTRLEETQENMPVLSFASKLLGCDLSSPSEENVRRRITCFKVKGLNKSCQISSIVVA

>gi568815593r:14551941_14753326|GENSCAN_predicted_CDS_6|1440_bp
atgccccagcccgaagcgtggccaggcgcgagctgcgccgagacgccggcgcgggaggcg
gcggccacggcgcgggacggcgggaaggcggcggccagcgggcagccgcggcccgagatg
cagtgcccggccgagcagtcttgtcttggtgtgcacaggaatgaggactgcagggaggag
agcaggaagggctatgaagaggtttctcagaagttcacctccatacggcgagtccgtggt
gataattactgtgcactgagggccacgctgttccaggccatgagccaggctgtggggctg
ccgccctggctgcaggacccggagctcatgctgttaccagaaaaactcataagcaaatac
aactggatcaagcaatggaaacttggactgaaatttgatgggaagaatgaggacctggtt
gataaaattaaagagtcccttactctgctgaggaagaagtgggcaggcttggctgaaatg
agaactgctgaagcaagacagatagcttgtgatgaactattcacaaatgaggcggaggaa
tatagcctctatgaagctgtaaaatttctaatgctaaacagagccattgaactatataat
gataaagagaaaggaaaggaagtaccatttttctctgtgcttctgtttgctcgggacaca
tcaaatgacccaggacagcttctgaggaaccacctcaaccaggtgggacacactggtggt
cttgaacaggttgaaatgttccttcttgcctatgctgtgcgccacaccatccaggtgtac
cggctctccaagtacaacacggaagaattcatcacagtctaccccaccgacccacccaag
gactggccagtggtaacgctcattgctgaggacgatcggcactataacatccccgtcaga
gtgtgttatattgaaatctactaccaggaatgtcggaatgggttttgctttagacagttc
cctgatcagtacatcattaagcaaccaaaatatctcattaaatccaaggagcagcgtatt
tgccactgcaaggcttgtggatgtggcagccctgggaaatgcaaacaagtggccttctgt
gccccatttaaagaatcccaaacgggagagtttcctgccaatgtgcaaatccgtcaatac
tccctgagccatgtggccggcaggtccaatcctaccgtgactttccaagcgcaagcctcg
tctagttctttttgctcagttgttgtctcactgacgccctttgccactgagatccctctg
gatgatgggactcgattagaagaaacgcaggagaatatgccagttctcagttttgcctca
aagttgttaggctgtgacttaagcagcccaagtgaagaaaatgtacgaagaaggatcacg
tgctttaaggtgaaaggtttgaacaagtcctgccaaatcagctccattgtggtggcctga

>gi568815593r:14551941_14753326|GENSCAN_predicted_peptide_7|515_aa
VVFVAILLHSHLECREPLLIPILSLYMGALVRCTTLCLGYYKNIHDIIPDRSGPELGGDA
TIRKMLSFWWPLALILATQRISRPIVNLFVSRDLGGSSAATEAVAILTATYPVGHMPYGW
LTEIRAVYPAFDKNNPSNKLVSTSNTVTAAHIKKFTFVCMALSLTLKDSVQKPDISLTGR
LVQTLPTRMRHQRGESKDVAPLASWLSEPSTSSEASQTSSKLTINSQGEGKAKQKLECGT
LSIVLRSCEKNQERIKAAEKRNRSWTTLCGLGAWRPLLFELPVIVQTPDQTNRFQFRYPA
KTQSGLCSFFHSFDLLTLEAFVKVWFPGCLLILIEYASSKNRKSKMLQNLKLLSADMTLK
LCFVMFWTPNVSEKILIDIIGVDFAFAELCVVPLRIFSFFPVPVTVRAHLTGWLMTLKKT
FVLAPSSVLRIIVLIASLVVLPYLGVHGATLGVGSLLAGFVGESTMVAIAACYVYRKQKK
KMENESATEGEDSAMTDMPPTEEVTDIVEMREENE

>gi568815593r:14551941_14753326|GENSCAN_predicted_CDS_7|1548_bp
gttgtttttgtagccattttgcttcacagtcacctggaatgccgggagcccctgctcatc
ccgatcctctccttgtacatgggcgcacttgtgcgctgcaccaccctgtgcctgggctac
tacaagaacattcacgacatcatccctgacagaagtggcccggagctggggggagatgca
acaataagaaagatgctgagcttctggtggcctttggctctaattctggccacacagaga
atcagtcggcctattgtcaacctctttgtttcccgggaccttggtggcagttctgcagcc
acagaggcagtggcgattttgacagccacataccctgtgggtcacatgccatacggctgg
ttgacggaaatccgtgctgtgtatcctgctttcgacaagaataaccccagcaacaaactg
gtgagcacgagcaacacagtcacggcagcccacatcaagaagttcaccttcgtctgcatg
gctctgtcactcacgcttaaagacagtgtacagaaaccagacatcagcctgacggggcgc
ttagtccagacactcccgacacgcatgcgccatcaacgtggagaaagcaaagatgtggcg
cctctggcctcttggctttccgagcccagcaccagctcggaggcttcccaaacaagttcc
aagttgactattaatagtcaaggagaaggaaaggctaaacagaagctggagtgtggaact
ttatcaatagtcctcagatcctgtgagaaaaaccaggaaaggattaaagctgcagagaaa
aggaataggagttggacaaccctctgcgggcttggcgcatggcgccccctgctgtttgag
ttacctgtgattgttcaaaccccagatcagactaaccgcttccagttccgataccccgcg
aagacccagtctgggctttgtagttttttccatagttttgacctcctcacattggaggcc
tttgtcaaagtctggtttcctggttgcctgctcattttgattgagtatgcctcatccaaa
aatcgaaaatccaaaatgctccaaaatctgaaacttttgagcgctgacatgactctcaaa
ctctgtttcgtgatgttttggacacccaacgtgtctgagaaaatcttgatagacatcatc
ggagtggactttgcctttgcagaactctgtgttgttcctttgcggatcttctccttcttc
ccagttccagtcacagtgagggcgcatctcaccgggtggctgatgacactgaagaaaacc
ttcgtccttgcccccagctctgtgctgcggatcatcgtcctcatcgccagcctcgtggtc
ctaccctacctgggggtgcacggtgcgaccctgggcgtgggctccctcctggcgggcttt
gtgggagaatccaccatggtcgccatcgctgcgtgctatgtctaccggaagcagaaaaag
aagatggagaatgagtcggccacggagggggaagactctgccatgacagacatgcctccg
acagaggaggtgacagacatcgtggaaatgagagaggagaatgaataa