Result of FASTA (omim) for
pF1KE4539
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4539, 622 aa
1>>>pF1KE4539 622 - 622 aa - 622 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7366+/-0.000326; mu= 18.3068+/- 0.020
mean_var=94.5394+/-19.232, 0's: 0 Z-trim(117.4): 32 B-trim: 0 in 0/54
Lambda= 0.131907
statistics sampled from 29413 (29445) to 29413 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.71), E-opt: 0.2 (0.345), width: 16
Scan time: 12.640
The best scores are: opt bits E(85289)
NP_001170826 (OMIM: 601051) mesothelin isoform 1 p ( 622) 4145 799.2 0
NP_005814 (OMIM: 601051) mesothelin isoform 1 prep ( 622) 4145 799.2 0
XP_016878344 (OMIM: 601051) PREDICTED: mesothelin ( 632) 4145 799.2 0
XP_005255091 (OMIM: 601051) PREDICTED: mesothelin ( 621) 4127 795.8 0
XP_016878345 (OMIM: 601051) PREDICTED: mesothelin ( 631) 4127 795.8 0
XP_016878346 (OMIM: 601051) PREDICTED: mesothelin ( 630) 4119 794.3 0
XP_011520650 (OMIM: 601051) PREDICTED: mesothelin ( 630) 4119 794.3 0
NP_037536 (OMIM: 601051) mesothelin isoform 2 prep ( 630) 4119 794.3 0
XP_016878342 (OMIM: 601051) PREDICTED: mesothelin ( 640) 4119 794.3 0
XP_016878347 (OMIM: 601051) PREDICTED: mesothelin ( 629) 4101 790.9 0
XP_016878343 (OMIM: 601051) PREDICTED: mesothelin ( 639) 4101 790.9 0
XP_011544050 (OMIM: 607038,607039) PREDICTED: otoa ( 798) 209 50.3 3.1e-05
NP_733764 (OMIM: 607038,607039) otoancorin isoform ( 815) 209 50.3 3.1e-05
NP_001155155 (OMIM: 607038,607039) otoancorin isof (1060) 209 50.4 3.8e-05
NP_653273 (OMIM: 607038,607039) otoancorin isoform (1139) 209 50.4 4e-05
XP_011544049 (OMIM: 607038,607039) PREDICTED: otoa (1139) 209 50.4 4e-05
XP_016878439 (OMIM: 607038,607039) PREDICTED: otoa (1142) 209 50.4 4.1e-05
XP_016878440 (OMIM: 607038,607039) PREDICTED: otoa ( 597) 189 46.4 0.00035
>>NP_001170826 (OMIM: 601051) mesothelin isoform 1 prepr (622 aa)
initn: 4145 init1: 4145 opt: 4145 Z-score: 4264.5 bits: 799.2 E(85289): 0
Smith-Waterman score: 4145; 99.8% identity (99.8% similar) in 622 aa overlap (1-622:1-622)
10 20 30 40 50 60
pF1KE4 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDGVLANPPNISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDGVLANPPNISS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 ACPSGKKAPEIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACPSGKKAREIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQVATLIDRFVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQVATLIDRFVK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 GRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQLDVLYPKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQLDVLYPKA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 RLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVLPLTVAEVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVLPLTVAEVQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 KLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLSMQEALSGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLSMQEALSGT
550 560 570 580 590 600
610 620
pF1KE4 PCLLGPGPVLTVLALLLASTLA
::::::::::::::::::::::
NP_001 PCLLGPGPVLTVLALLLASTLA
610 620
>>NP_005814 (OMIM: 601051) mesothelin isoform 1 prepropr (622 aa)
initn: 4145 init1: 4145 opt: 4145 Z-score: 4264.5 bits: 799.2 E(85289): 0
Smith-Waterman score: 4145; 99.8% identity (99.8% similar) in 622 aa overlap (1-622:1-622)
10 20 30 40 50 60
pF1KE4 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDGVLANPPNISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDGVLANPPNISS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 ACPSGKKAPEIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ACPSGKKAREIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQVATLIDRFVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQVATLIDRFVK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 GRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQLDVLYPKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQLDVLYPKA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 RLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVLPLTVAEVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVLPLTVAEVQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 KLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLSMQEALSGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLSMQEALSGT
550 560 570 580 590 600
610 620
pF1KE4 PCLLGPGPVLTVLALLLASTLA
::::::::::::::::::::::
NP_005 PCLLGPGPVLTVLALLLASTLA
610 620
>>XP_016878344 (OMIM: 601051) PREDICTED: mesothelin isof (632 aa)
initn: 4145 init1: 4145 opt: 4145 Z-score: 4264.4 bits: 799.2 E(85289): 0
Smith-Waterman score: 4145; 99.8% identity (99.8% similar) in 622 aa overlap (1-622:11-632)
10 20 30 40 50
pF1KE4 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDG
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVASLKGTQTMALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE4 VLANPPNISSLSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLANPPNISSLSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 PPEDLDALPLDLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPEDLDALPLDLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACW
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE4 GVRGSLLSEADVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVRGSLLSEADVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE4 GPPYGPPSTWSVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPPYGPPSTWSVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILR
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE4 PRFRREVEKTACPSGKKAPEIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLD
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
XP_016 PRFRREVEKTACPSGKKAREIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLD
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE4 VLKHKLDELYPQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLKHKLDELYPQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQ
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE4 VATLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VATLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDP
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE4 RQLDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQLDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDA
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE4 VLPLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLPLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLD
550 560 570 580 590 600
600 610 620
pF1KE4 LSMQEALSGTPCLLGPGPVLTVLALLLASTLA
::::::::::::::::::::::::::::::::
XP_016 LSMQEALSGTPCLLGPGPVLTVLALLLASTLA
610 620 630
>>XP_005255091 (OMIM: 601051) PREDICTED: mesothelin isof (621 aa)
initn: 3853 init1: 3853 opt: 4127 Z-score: 4246.0 bits: 795.8 E(85289): 0
Smith-Waterman score: 4127; 99.7% identity (99.7% similar) in 622 aa overlap (1-622:1-621)
10 20 30 40 50 60
pF1KE4 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDGVLANPPNISS
::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::
XP_005 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQ-AAPLDGVLANPPNISS
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE4 ACPSGKKAPEIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ACPSGKKAREIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE4 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQVATLIDRFVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQVATLIDRFVK
360 370 380 390 400 410
430 440 450 460 470 480
pF1KE4 GRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQLDVLYPKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQLDVLYPKA
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE4 RLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVLPLTVAEVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVLPLTVAEVQ
480 490 500 510 520 530
550 560 570 580 590 600
pF1KE4 KLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLSMQEALSGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLSMQEALSGT
540 550 560 570 580 590
610 620
pF1KE4 PCLLGPGPVLTVLALLLASTLA
::::::::::::::::::::::
XP_005 PCLLGPGPVLTVLALLLASTLA
600 610 620
>>XP_016878345 (OMIM: 601051) PREDICTED: mesothelin isof (631 aa)
initn: 3853 init1: 3853 opt: 4127 Z-score: 4245.9 bits: 795.8 E(85289): 0
Smith-Waterman score: 4127; 99.7% identity (99.7% similar) in 622 aa overlap (1-622:11-631)
10 20 30 40 50
pF1KE4 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDG
::::::::::::::::::::::::::::::::::::::::::: ::::::
XP_016 MVASLKGTQTMALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQ-AAPLDG
10 20 30 40 50
60 70 80 90 100 110
pF1KE4 VLANPPNISSLSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLANPPNISSLSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE4 PPEDLDALPLDLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPEDLDALPLDLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACW
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 GVRGSLLSEADVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVRGSLLSEADVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE4 GPPYGPPSTWSVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPPYGPPSTWSVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILR
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE4 PRFRREVEKTACPSGKKAPEIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLD
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
XP_016 PRFRREVEKTACPSGKKAREIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLD
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE4 VLKHKLDELYPQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLKHKLDELYPQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQ
360 370 380 390 400 410
420 430 440 450 460 470
pF1KE4 VATLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VATLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDP
420 430 440 450 460 470
480 490 500 510 520 530
pF1KE4 RQLDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQLDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDA
480 490 500 510 520 530
540 550 560 570 580 590
pF1KE4 VLPLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLPLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLD
540 550 560 570 580 590
600 610 620
pF1KE4 LSMQEALSGTPCLLGPGPVLTVLALLLASTLA
::::::::::::::::::::::::::::::::
XP_016 LSMQEALSGTPCLLGPGPVLTVLALLLASTLA
600 610 620 630
>>XP_016878346 (OMIM: 601051) PREDICTED: mesothelin isof (630 aa)
initn: 2757 init1: 2757 opt: 4119 Z-score: 4237.7 bits: 794.3 E(85289): 0
Smith-Waterman score: 4119; 98.6% identity (98.6% similar) in 630 aa overlap (1-622:1-630)
10 20 30 40 50 60
pF1KE4 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDGVLANPPNISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDGVLANPPNISS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 ACPSGKKAPEIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACPSGKKAREIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
310 320 330 340 350 360
370 380 390 400 410
pF1KE4 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQ--------VA
:::::::::::::::::::::::::::::::::::::::::::::::::: ::
XP_016 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQAPRRPLPQVA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE4 TLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE4 LDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVL
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE4 PLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLS
550 560 570 580 590 600
600 610 620
pF1KE4 MQEALSGTPCLLGPGPVLTVLALLLASTLA
::::::::::::::::::::::::::::::
XP_016 MQEALSGTPCLLGPGPVLTVLALLLASTLA
610 620 630
>>XP_011520650 (OMIM: 601051) PREDICTED: mesothelin isof (630 aa)
initn: 2757 init1: 2757 opt: 4119 Z-score: 4237.7 bits: 794.3 E(85289): 0
Smith-Waterman score: 4119; 98.6% identity (98.6% similar) in 630 aa overlap (1-622:1-630)
10 20 30 40 50 60
pF1KE4 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDGVLANPPNISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDGVLANPPNISS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 ACPSGKKAPEIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ACPSGKKAREIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
310 320 330 340 350 360
370 380 390 400 410
pF1KE4 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQ--------VA
:::::::::::::::::::::::::::::::::::::::::::::::::: ::
XP_011 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQAPRRPLPQVA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE4 TLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE4 LDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVL
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE4 PLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLS
550 560 570 580 590 600
600 610 620
pF1KE4 MQEALSGTPCLLGPGPVLTVLALLLASTLA
::::::::::::::::::::::::::::::
XP_011 MQEALSGTPCLLGPGPVLTVLALLLASTLA
610 620 630
>>NP_037536 (OMIM: 601051) mesothelin isoform 2 prepropr (630 aa)
initn: 2757 init1: 2757 opt: 4119 Z-score: 4237.7 bits: 794.3 E(85289): 0
Smith-Waterman score: 4119; 98.6% identity (98.6% similar) in 630 aa overlap (1-622:1-630)
10 20 30 40 50 60
pF1KE4 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDGVLANPPNISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDGVLANPPNISS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 ACPSGKKAPEIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 ACPSGKKAREIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
310 320 330 340 350 360
370 380 390 400 410
pF1KE4 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQ--------VA
:::::::::::::::::::::::::::::::::::::::::::::::::: ::
NP_037 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQAPRRPLPQVA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE4 TLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 TLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE4 LDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 LDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVL
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE4 PLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 PLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLS
550 560 570 580 590 600
600 610 620
pF1KE4 MQEALSGTPCLLGPGPVLTVLALLLASTLA
::::::::::::::::::::::::::::::
NP_037 MQEALSGTPCLLGPGPVLTVLALLLASTLA
610 620 630
>>XP_016878342 (OMIM: 601051) PREDICTED: mesothelin isof (640 aa)
initn: 2757 init1: 2757 opt: 4119 Z-score: 4237.6 bits: 794.3 E(85289): 0
Smith-Waterman score: 4119; 98.6% identity (98.6% similar) in 630 aa overlap (1-622:11-640)
10 20 30 40 50
pF1KE4 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDG
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVASLKGTQTMALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE4 VLANPPNISSLSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLANPPNISSLSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 PPEDLDALPLDLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPEDLDALPLDLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACW
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE4 GVRGSLLSEADVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVRGSLLSEADVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE4 GPPYGPPSTWSVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPPYGPPSTWSVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILR
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE4 PRFRREVEKTACPSGKKAPEIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLD
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
XP_016 PRFRREVEKTACPSGKKAREIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLD
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE4 VLKHKLDELYPQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLKHKLDELYPQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQ
370 380 390 400 410 420
420 430 440 450 460
pF1KE4 --------VATLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRP
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APRRPLPQVATLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRP
430 440 450 460 470 480
470 480 490 500 510 520
pF1KE4 QDLDTCDPRQLDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QDLDTCDPRQLDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLAT
490 500 510 520 530 540
530 540 550 560 570 580
pF1KE4 FMKLRTDAVLPLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FMKLRTDAVLPLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGI
550 560 570 580 590 600
590 600 610 620
pF1KE4 PNGYLVLDLSMQEALSGTPCLLGPGPVLTVLALLLASTLA
::::::::::::::::::::::::::::::::::::::::
XP_016 PNGYLVLDLSMQEALSGTPCLLGPGPVLTVLALLLASTLA
610 620 630 640
>>XP_016878347 (OMIM: 601051) PREDICTED: mesothelin isof (629 aa)
initn: 2465 init1: 2465 opt: 4101 Z-score: 4219.2 bits: 790.9 E(85289): 0
Smith-Waterman score: 4101; 98.4% identity (98.4% similar) in 630 aa overlap (1-622:1-629)
10 20 30 40 50 60
pF1KE4 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQEAAPLDGVLANPPNISS
::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::
XP_016 MALPTARPLLGSCGTPALGSLLFLLFSLGWVQPSRTLAGETGQ-AAPLDGVLANPPNISS
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSPRQLLGFPCAEVSGLSTERVRELAVALAQKNVKLSTEQLRCLAHRLSEPPEDLDALPL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLLLFLNPDAFSGPQACTRFFSRITKANVDLLPRGAPERQRLLPAALACWGVRGSLLSEA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVRALGGLACDLPGRFVAESAEVLLPRLVSCPGPLDQDQQEAARAALQGGGPPYGPPSTW
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVSTMDALRGLLPVLGQPIIRSIPQGIVAAWRQRSSRDPSWRQPERTILRPRFRREVEKT
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE4 ACPSGKKAPEIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACPSGKKAREIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELY
300 310 320 330 340 350
370 380 390 400 410
pF1KE4 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQ--------VA
:::::::::::::::::::::::::::::::::::::::::::::::::: ::
XP_016 PQGYPESVIQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQAPRRPLPQVA
360 370 380 390 400 410
420 430 440 450 460 470
pF1KE4 TLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQ
420 430 440 450 460 470
480 490 500 510 520 530
pF1KE4 LDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDLKALSQQNVSMDLATFMKLRTDAVL
480 490 500 510 520 530
540 550 560 570 580 590
pF1KE4 PLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGLQGGIPNGYLVLDLS
540 550 560 570 580 590
600 610 620
pF1KE4 MQEALSGTPCLLGPGPVLTVLALLLASTLA
::::::::::::::::::::::::::::::
XP_016 MQEALSGTPCLLGPGPVLTVLALLLASTLA
600 610 620
622 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 17:38:42 2016 done: Mon Nov 7 17:38:43 2016
Total Scan time: 12.640 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]