GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:06:56

Sequence gi568815592f:34140781_34344881 : 204101 bp : 47.38% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1375   1436   62  0  2   60  117    17 0.649   2.24
 1.02 Term +   4154   4856  703  2  1   77   54   345 0.458  23.00
 1.03 PlyA +   6298   6303    6                               1.05

 2.04 PlyA -   6428   6423    6                               1.05
 2.03 Term -   8156   8075   82  1  1  135   43    56 0.465   2.97
 2.02 Intr -  12766  12680   87  0  0   86   75    43 0.398   1.89
 2.01 Init -  14170  14115   56  1  2   67   44    88 0.319   2.33
 2.00 Prom -  25770  25731   40                              -5.96

 3.00 Prom +  29909  29948   40                              -5.46
 3.01 Init +  34873  34880    8  0  2   89   95     0 0.087   1.32
 3.02 Intr +  38811  38987  177  0  0   36   54   108 0.034   1.23
 3.03 Intr +  48997  49068   72  1  0   82   92   118 0.108  10.12
 3.04 Intr +  49308  49544  237  0  0   24    8   270 0.718   9.33
 3.05 Intr +  49686  49932  247  0  1  -38   33   395 0.841  18.86
 3.06 Intr +  50050  50263  214  0  1  -38  -12   258 0.002   1.49
 3.07 Term +  55609  56027  419  2  2   12   48   251 0.800   8.94
 3.08 PlyA +  56599  56604    6                               1.05

 4.00 Prom +  62886  62925   40                              -2.86
 4.01 Init +  78661  78940  280  0  1   48   -9   211 0.458   4.57
 4.02 Intr +  82647  82684   38  1  2  142   95     2 0.606   4.28
 4.03 Intr +  83520  83616   97  2  1  100   26    61 0.134   0.68
 4.04 Intr +  91381  91514  134  2  2   96   76    48 0.934   4.76
 4.05 Intr +  92058  92113   56  2  2   82   74    39 0.721  -0.32
 4.06 Intr +  94045  94240  196  1  1   73   48   113 0.928   5.22
 4.07 Intr +  95324  95393   70  1  1   93   86    52 0.978   4.25
 4.08 Intr +  96102  96183   82  1  1   73   69    38 0.500  -0.90
 4.09 Intr +  96424  96537  114  1  0  105  101    46 0.499   7.16
 4.10 Intr +  99991 100102  112  1  1   81  117   104 0.500  12.98
 4.11 Intr + 101932 102015   84  0  0  127   80    46 0.995   7.72
 4.12 Intr + 103739 103835   97  1  1  138   72    31 0.965   6.08
 4.13 Term + 104199 104302  104  1  2   97   48    52 0.959   0.54
 4.14 PlyA + 105427 105432    6                               1.05

 5.07 PlyA - 105634 105629    6                               1.05
 5.06 Term - 106088 106023   66  2  0  103   43    93 0.987   4.24
 5.05 Intr - 106369 106264  106  0  1  117  105   119 0.999  16.72
 5.04 Intr - 106712 106687   26  2  2  114  101    -9 0.950  -0.18
 5.03 Intr - 106978 106901   78  1  0   90   79    98 0.721   8.85
 5.02 Intr - 108452 108199  254  0  2   60   94   127 0.903   7.65
 5.01 Init - 109858 109810   49  1  1   86   58    43 0.853   0.21
 5.00 Prom - 113365 113326   40                              -4.76

 6.03 PlyA - 113982 113977    6                               1.05
 6.02 Term - 122707 122525  183  1  0   54   55   381 0.991  28.94
 6.01 Init - 122893 122792  102  1  0   98   -5   254 0.463  17.34
 6.00 Prom - 123505 123466   40                              -6.16

 7.00 Prom + 127040 127079   40                              -4.56
 7.01 Init + 128514 128675  162  2  0   97   66   117 0.674   9.40
 7.02 Intr + 131969 132071  103  1  1  108   67    43 0.623   3.95
 7.03 Term + 143776 143852   77  2  2   88   44   122 0.857   5.80
 7.04 PlyA + 144953 144958    6                               1.05

 8.04 PlyA - 145303 145298    6                               1.05
 8.03 Term - 148151 147973  179  0  2  125   42    94 0.983   6.35
 8.02 Intr - 152755 152671   85  1  1  113   99    72 0.937  10.19
 8.01 Init - 201135 201082   54  0  0   93   69    87 0.563   8.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 172681 172786  106  1  1   30   50   163 0.824   4.58
S.002 Init + 176702 176759   58  1  1   75   61    90 0.836   6.47


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:34140781_34344881|GENSCAN_predicted_peptide_1|254_aa
MPTSASPLGPPRQPAALLQPRAPGAPALLGALQARELAGGHLPEPRCPRRSPRPRRPEGT
VPSVGPPRATTHRAPARFKPRRGVGCVPACPGGAGSRRPEARFSRCPEPGPRRAALTLRT
QRAAEPPGVRDAAGMSWRPPGRSRRQARGVRLLLRQASKREGDRRQPLLLLRRSPASEPE
GAGEAARGAGSGRELRAGKGAERERPASAAGRGTGAWRRRNSGNSSRKKNESELESALES
ERERERETRERGRR

>gi568815592f:34140781_34344881|GENSCAN_predicted_CDS_1|765_bp
atgcccaccagtgcaagccccttaggcccgccaagacagccagcagctcttctgcagccc
cgggctccgggggcgccagctctcctcggagcactccaagcgcgggagctcgccggaggc
cacctccccgagccccgatgtccccgccgcagccctcgccccaggaggccggagggcacg
gtcccctctgtcggtccccctcgggccacaactcaccgcgcgccagcaaggtttaagccg
cggcgaggggtcggctgcgtgccggcctgccccgggggcgcaggcagtcgacggccggag
gcacggttctcgcggtgcccagagcccgggccgcggcgggcagcgctgacgctgcggacc
cagcgcgccgcggagccgcccggagtccgggacgcagcagggatgagctggcggccgccc
ggccggagccgccgccaagcgcgcggcgttcggctgctgctccggcaagcgagcaagcga
gagggagatcggcggcaacccctgctcctgctgcggcggagcccggcgtccgagccggaa
ggagcgggagaggcggcaagaggagctgggtctggccgagagctccgggctgggaaggga
gcggagcgggagcgaccagcgagcgcagccggccgaggtacgggcgcctggcggcgccgc
aacagcggcaacagcagcaggaaaaaaaatgagagcgagctagagagcgcgctggagagc
gagcgagagagggagcgagagacgagagagcgaggaaggcgctga

>gi568815592f:34140781_34344881|GENSCAN_predicted_peptide_2|74_aa
MRAFGHRAAVLARDGEPGCCSQESVSHDLCSVRQKALPLGRQFSFVNRDGVAISLDEDWC
RNGRVSITPCLLHE

>gi568815592f:34140781_34344881|GENSCAN_predicted_CDS_2|225_bp
atgagggcgttcggccaccgggcggcggtgctggcccgcgatggggagcctggctgctgc
tcacaggagagcgtcagccatgacctctgcagtgttcggcaaaaggctttgcccctgggc
aggcaattcagttttgtcaacagagatggtgttgccatttccctggatgaggactggtgc
aggaacgggcgggtcagcatcactccctgcttactccacgagtag

>gi568815592f:34140781_34344881|GENSCAN_predicted_peptide_3|457_aa
MGRRGRSSRLFLVPAGSVELAAPVMPPPLQPESFQQPLQTDHYHHQTHLILTATLKGGYY
AGMSFTTRSTTFSTNYQSLDSMQPPRVRSLETENRRLESKIQEYLEKKGPQVRDWGHYFK
TMEDLRAQIFANSVNNASIILQIDNPHLAADETELAMCQSGERHLSGLTVEVDAPKSQDL
AKIMADIQAQYDKLSQKNREKLNQYCSHQTEESTTVVTTQSAKIRAAEMTLMKLRRTVQS
LEINLDSTRAEEQRQAQEYKALLNIQVKLEAEMATYHHLLEDGKDFNLGMPWTAAIPCKR
PPSNRPPSPRRQDSGWQSGAAKRATTARGRQAATRDSQGQAHAGHQPHYSSASQVGTHGA
RASTLLTAASRIPLNSCPHGNPSLQGSRLPGIPVRPQRRPCGRSLGTAAAHQVCCTPSVR
GPSECTLRLLHCERERGERNMDPKTLALAELRLGPMP

>gi568815592f:34140781_34344881|GENSCAN_predicted_CDS_3|1374_bp
atgggaagaagggggcgcagctcccgcctgtttctggttcctgctggctccgtggagcta
gcagccccggtcatgcctcccccactgcagccagagtcttttcagcagccactccagacg
gaccactaccaccatcagactcacttaatcctcacagcaaccctaaaaggtgggtactac
gcaggcatgagcttcaccactcgctctaccaccttctccaccaactaccagtccctggac
tcaatgcagccgcccagagtgaggagcctggagactgagaatcggaggctggagagcaaa
atccaggagtatctggagaagaagggaccccaggtcagagattgggggcattacttcaag
accatggaggacctgagggctcagatcttcgcaaattctgtgaacaatgccagcatcatt
ctgcagattgacaatccccatcttgccgctgatgagacagagctggccatgtgccagtct
ggagagcgacatctctctgggttaaccgtggaggtagatgcccccaaatcacaggatctt
gccaagatcatggcagacatccaggcccaatatgacaagctgtctcagaagaatcgagag
aagctgaaccagtactgctcccaccagactgaggagagcaccacagtggtcaccacgcag
tctgccaagatcagagctgctgagatgacgctcatgaagctgagacgtacagtccagtcc
ttggagatcaacctggactcaacccgggcagaggagcagcgccaggcccaggagtacaag
gccctgctgaatatccaggtcaagctggaggccgagatggccacctaccaccacctgctg
gaagacggcaaggacttcaatcttgggatgccctggacagcagcaattccatgcaaacga
ccaccatccaacagaccaccctccccccgccgccaggatagtggatggcaaagtggcgcg
gcgaagcgggccacgaccgcgagggggcgccaggcagccacgcgagactcccagggtcag
gcccacgcgggccaccagccgcactactcttccgcttcccaagtcggcacacacggcgcc
cgtgcctccacgctgctgactgctgcaagtcgaatccctctcaactcctgtccgcacggg
aaccccagtttacaggggagccggctgcctggcatcccggtgcggccacagaggcgtcct
tgtggaaggagcctggggaccgctgcggcccatcaagtgtgctgcacgccctccgtgcgc
ggcccgtcggagtgcaccttgcgcctcctgcattgtgaaagggagcggggagaacggaac
atggacccaaagacactggcactggcagagctccgcctggggccgatgccttag

>gi568815592f:34140781_34344881|GENSCAN_predicted_peptide_4|487_aa
MGDVEKGKKIFIMKRSQCHIVEKGGKHKTGPNLHGLFGRKTGQAPGHSYIATIKNKDIIW
GEDTLMEYLENPKKYIPGTKMIFVGIKKEEAGHGRLHGCCSTESQLTAARTPPAGSRYAA
AARTPGSGLRVPVGLGERGWHYSMYHAGGIACVLVYPLVHPTQCKPLEDRNVATHFKATP
LVVISSGVGEELGFLGDLALKKGGHTSHTDGERCTRERGRTGPSPHLPSRQAASPVPGPS
SLRGLGEREVEGRAALGGSPSPDLGPKSQRKGPGPQVGLRISRTPSKSPQAPLSRCCAPL
IGTPSRGYFWRWRGSKKASAFATSGGRGGARPVLSAQHRRSRQPGARTAGRRPSSREGKM
SESSSKSSQPLASKQEKDGTEKRGRGRPRKQPPKEPSEVPTPKRPRGRPKGSKNKGAAKT
RGVSHILKLIAALSSALLPSLGLGAKGAWLLALGPPSPPPLAATPIFHLCPHHHTTQHTS
RCRAPMG

>gi568815592f:34140781_34344881|GENSCAN_predicted_CDS_4|1464_bp
atgggtgatgttgagaaaggcaagaagatttttattatgaagcgttcccagtgccacatt
gttgaaaagggaggcaagcataagactgggccaaatctccatggtctcttcgggcggaag
acaggtcaggcccctggacactcttacatagccaccattaagaacaaagacatcatctgg
ggagaggatacactgatggagtatttggagaatcccaagaagtacatccctggaacaaaa
atgatctttgtcggcattaagaaggaagaggctgggcacggtcggctgcatgggtgctgc
tcaacagaaagccagctgacagcagcacgcacacccccggccggctcacggtacgcggcc
gctgcccgcactcccgggtcgggcctgcgcgtccctgtggggttgggcgagcggggctgg
cattacagcatgtaccacgctggtggaattgcctgtgtacttgtctatcccctcgtgcac
cccactcaatgcaagccccttgaggacaggaatgtagctacccatttcaaggccacaccc
ttggtggtgatttcttcaggggttggagaggagctgggcttccttggggatttagccctg
aagaagggcggccacacgtcccacacggacggggagagatgtacccgagagagagggcgg
acaggaccctctccgcacctccccagccgccaggccgccagcccggtgcccgggcctagc
agcctccgcggccttggagagcgcgaagtggaggggcgcgcggctctggggggcagcccg
agcccagacctgggtcccaagtcccaacggaagggcccaggtccccaagtgggcctgcgt
atctccagaacaccatctaagtcacctcaagctcccctgagccggtgctgcgctcctcta
attgggactccgagccggggctatttctggcgctggcgcggctccaagaaggcatccgca
tttgctaccagcggcggccgcggcggagccaggccggtcctcagcgcccagcaccgccgc
tcccggcaacccggagcgcgcaccgcaggccggcggccgagctcgcgagaagggaagatg
agtgagtcgagctcgaagtccagccagcccttggcctccaagcaggaaaaggacggcact
gagaagcggggccggggcaggccgcgcaagcagcctccgaaggagcccagcgaagtgcca
acacctaagagacctcggggccgaccaaagggaagcaaaaacaagggtgctgccaagacc
cggggagtcagtcacatcctgaagctcattgctgccctgagctctgccctcctgccctcc
ctgggcctgggggccaagggggcttggctcctggctctgggcccaccatcaccaccgcct
ctggccgccacccccatcttccacctgtgccctcaccaccacactacacagcacaccagc
cgctgcagggctcccatgggctga

>gi568815592f:34140781_34344881|GENSCAN_predicted_peptide_5|192_aa
MGFHLFGQAGLELLTSALGCPLPPPGGPCKPRCPRLRTAHPRLRIGGSRNLQATGFPLPD
WLRPGAEARPISPGPLITRLTAFPGPGSQPRAFLSGLQRREANSDSMVGYVLGPFFLITL
VGVVVAVVMYVQKKKRVDRLRHHLLPMYSYDPAEELHEAEQELLSDMGDPKVVHGWQSGY
QHKRMPLLDVKT

>gi568815592f:34140781_34344881|GENSCAN_predicted_CDS_5|579_bp
atggggtttcacctctttggccaggctggtctcgaactcctgacatcagccctcggctgc
cccctgccgccgccgggcggaccctgcaagccccgctgtccccgccttcgcaccgcccac
ccccgcctccggattggcggctccagaaatctccaggccaccggctttccgctaccggat
tggctgcgtccgggtgctgaggcccggcccatttccccgggtcctttgatcacgcgcctg
acggcttttccggggcccgggagccaaccgagggcgttcctgtcggggctgcagcggcgg
gaggccaacagcgactccatggtgggctatgtgttggggcccttcttcctcatcaccctg
gtcggggtggtggtggctgtggtaatgtatgtacagaagaaaaagcgggtggaccggctg
cgccatcacctgctccccatgtacagctatgacccagctgaggaactgcatgaggctgag
caggagctgctctctgacatgggagaccccaaggtggtacatggctggcagagtggctac
cagcacaagcggatgccactgctggatgtcaagacgtga

>gi568815592f:34140781_34344881|GENSCAN_predicted_peptide_6|94_aa
MAKIKARDLRGKKEELLKQLDDLKVELSQLRVAKTQKENLRKFYKGRNYKPLDLRPKKTR
AMRRRLNKHEENPKTKKQQRKERLYPLGKYAVKA

>gi568815592f:34140781_34344881|GENSCAN_predicted_CDS_6|285_bp
atggccaagatcaaggctcgagatcttcgcgggaagaaggaggagctgctgaaacagctg
gacgacctgaaggtggagctgtcccagctgcgcgtcgccaaaactcagaaagaaaacctc
aggaaattctacaagggcaggaactacaagcccctggacctgcggcctaagaagacacgc
gccatgcgccgccggctcaacaagcatgaggagaacccgaagaccaagaagcagcagcgg
aaggagcggctgtacccgctggggaagtacgcggtcaaggcctga

>gi568815592f:34140781_34344881|GENSCAN_predicted_peptide_7|113_aa
MPEPPTHSMGSCAARASPTSTTPCSTAPSPIDHPRAEECERTAPDWQAAPPAAPPPAGFN
CLCSEVWMEVPASQGRCEGLGPGPWAYADEDADSNKGIKKVLDENEKYVKDNM

>gi568815592f:34140781_34344881|GENSCAN_predicted_CDS_7|342_bp
atgcctgagcctcccacccactccatgggctcctgtgccgcccgagcctccccaacgagc
accaccccctgctccacggcgcccagtcccatcgaccacccaagggctgaggagtgcgag
cgcacggcgccggactggcaggcagctccacctgcagccccgccccctgcaggcttcaac
tgcctctgcagtgaggtgtggatggaagtacctgcctctcagggtagatgtgaaggtctg
ggtcctgggccctgggcctatgcagatgaggatgcggactccaacaaaggcattaagaaa
gtactagatgaaaatgagaaatatgtgaaggataacatgtga

>gi568815592f:34140781_34344881|GENSCAN_predicted_peptide_8|105_aa
MEPEEEPSVAAVREVCEENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIK
VLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR

>gi568815592f:34140781_34344881|GENSCAN_predicted_CDS_8|318_bp
atggagcccgaggaggagccaagtgtggcagcagttcgtgaagtctgtgaggagaaccag
gagaggaagcacaggacgtatgtctatgtgctcattgtcactgaagtgctggaagactgg
gaagattcagttaacattggaaggaagagggaatggtttaaaatagaagacgccataaaa
gtgctgcagtatcacaaacccgtgcaggcatcatattttgaaacattgaggcaaggctac
tcagccaacaatggcaccccagtcgtggccaccacatactcggtttctgctcagagctcg
atgtcaggcatcagatga