GENSCAN 1.0	Date run:  5-Nov-116	Time: 06:21:46

Sequence gi568815584f:103235861_103441049 : 205189 bp : 45.60% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1926   2156  231  1  0   57    0   171 0.126   2.94
 1.02 Intr +   5860   5997  138  2  0   23   77   152 0.187   8.04
 1.03 Intr +   6775   6801   27  2  0  132   86    21 0.791   4.39
 1.04 Intr +  33849  34027  179  1  2  101   51    52 0.523   2.44
 1.05 Intr +  36677  36864  188  1  2   18   54   191 0.171   7.19
 1.06 Term +  43351  43942  592  1  1   68   48   724 0.553  60.40
 1.07 PlyA +  44992  44997    6                               1.05

 2.00 Prom +  46484  46523   40                              -3.26
 2.01 Sngl +  47347  47625  279  0  0    9   36   205 0.429   2.83
 2.02 PlyA +  48894  48899    6                               1.05

 3.04 PlyA -  49365  49360    6                               1.05
 3.03 Term -  51387  51125  263  1  2   96   48   116 0.453   4.09
 3.02 Intr -  55110  54982  129  1  0  111   41   103 0.808   8.57
 3.01 Init -  71565  71487   79  0  1   78   73    54 0.377   4.12
 3.00 Prom -  76002  75963   40                              -5.66

 4.00 Prom +  86384  86423   40                              -4.26
 4.01 Init +  87492  87530   39  2  0   88   93    19 0.094   2.58
 4.02 Intr +  97735  98074  340  0  1   26   37   209 0.055   4.65
 4.03 Intr +  98529  98737  209  1  2   79  113   145 0.187  14.90
 4.04 Intr + 100176 100257   82  2  1   68   86    95 0.999   6.51
 4.05 Intr + 100817 100989  173  0  2   57  111   149 0.997  13.76
 4.06 Intr + 101256 101367  112  2  1   57  105    -9 0.868  -2.35
 4.07 Intr + 102467 102612  146  0  2   90  101   106 0.915  12.10
 4.08 Intr + 102875 103033  159  1  0   78   93   183 0.993  17.98
 4.09 Intr + 103312 103473  162  0  0  133   65   104 0.993  12.77
 4.10 Intr + 103779 103943  165  2  0   34   81   152 0.968   9.26
 4.11 Intr + 104567 104701  135  1  0   45   82   197 0.997  15.56
 4.12 Term + 105103 105192   90  0  0   76   43   166 0.999   8.62
 4.13 PlyA + 105472 105477    6                               1.05

 5.00 Prom + 106303 106342   40                              -4.76
 5.01 Init + 107821 107861   41  0  2   68   78    32 0.157  -0.13
 5.02 Intr + 114192 114528  337  0  1   59   89   143 0.066   7.02
 5.03 Intr + 120167 120230   64  1  1   84  100    60 0.208   5.09
 5.04 Term + 123573 123583   11  1  2   92   43    -7 0.022  -6.44
 5.05 PlyA + 125870 125875    6                               1.05

 6.06 PlyA - 125928 125923    6                               1.05
 6.05 Term - 128638 128379  260  2  2   22   42   334 0.113  17.91
 6.04 Intr - 138804 138372  433  0  1  -29   30   382 0.161  13.92
 6.03 Intr - 139069 138838  232  0  1   33   19   221 0.367   7.48
 6.02 Intr - 142301 142188  114  1  0   89   94    57 0.370   5.96
 6.01 Init - 143068 142965  104  1  2   90   69    66 0.318   4.73
 6.00 Prom - 146552 146513   40                              -6.36

 7.05 PlyA - 147257 147252    6                               1.05
 7.04 Term - 150023 149505  519  2  0   61   49   265 0.373  14.20
 7.03 Intr - 150442 150230  213  1  0   20   32   196 0.377   6.11
 7.02 Intr - 169298 169251   48  2  0   40   78    75 0.029   0.58
 7.01 Init - 173880 173872    9  0  0   88   83    21 0.055   0.91
 7.00 Prom - 174311 174272   40                              -7.06

 8.02 PlyA - 174321 174316    6                               1.05
 8.01 Sngl - 176811 176248  564  0  0   74   48   411 0.999  31.85
 8.00 Prom - 183682 183643   40                              -3.76

 9.02 PlyA - 183894 183889    6                               1.05
 9.01 Sngl - 190807 190505  303  1  0   62   43   147 0.705   3.43
 9.00 Prom - 196424 196385   40                              -2.46


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100072   72  1  0   78   85   130 0.919  12.77


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:103235861_103441049|GENSCAN_predicted_peptide_1|451_aa
XPNQQPIWIPSRHLKPYHEPDDEEEILGGSRGPPGCSHVEADAEEDPNCHKQHLLNTATH
LGTDQEAVTDGRRKPEENKQVKGKIPAKRINERIEHIKPSMSRDSFLKRVKENDQKETEA
TEKDPGDNQLEPAALRLSPLRTAVHRPHPDINQTLTLPLPFAFSIQPYQPASPPDKRPPT
SEWFWPVYGGCTECRLQSLRGLREDPETRSPRIKAPSGEKDHPDIVNQCEAATYTSNPCL
SVSVRIFGYILYGTMAAGVCCWGAWSGQDHAGHAVRVRPLPEQCAAWAEERLREEIEANA
APALLEVVDAAGAEHLVTLQDLDIRHGDGSAVLPGVCSEASFRAVRPPSKRLRRPWEPGA
VPRVLVGTQADPDDGRQVLTARGREGRSPFPEVMAKSQRMVDRVFMQAVRETEALVPPEE
EVECWEVFCCPLDSIQKKMALVAASKRGEGG

>gi568815584f:103235861_103441049|GENSCAN_predicted_CDS_1|1356_bp
ngaccgaatcaacagccgatttggataccatcaagacacctgaaaccttatcatgagcca
gatgatgaggaagagattctgggaggatcccgaggaccccctggttgcagccatgttgag
gctgacgctgaggaggaccccaactgtcacaagcaacacctgctgaacacagccacccac
ctggggacagaccaagaagctgtcacagatggcagaagaaaacctgaggaaaacaaacaa
gttaagggcaagattcctgccaagagaattaatgagcgtattgagcacattaagccctct
atgagccgagatagcttcctgaaacgcgtgaaggaaaatgatcagaaagagacagaagcc
acagagaaagatccaggagataatcaactagagccagctgcccttaggctttctcccctg
cggactgcggtccacagaccccaccccgacatcaaccagactctgacgctgccgcttcct
tttgcattttcaatacaaccttaccaaccagcatcccctcctgataagagaccaccgacc
tcagagtggttctggccagtctacggaggatgcacagagtgccggctccagagtcttcgg
ggtctcagagaagacccagaaacaaggtctccacgaattaaagcaccatcaggagagaaa
gaccatccggatatagtcaatcagtgcgaggcagccacatacacaagtaacccttgttta
agcgtcagtgtacgcattttcggttacatcttatacggcactatggctgccggggtgtgc
tgctggggagcgtggagtgggcaggaccacgctggacacgcagttcgcgtgcggccgctc
cccgagcagtgcgcggcgtgggcggaggagcggctccgcgaggagatcgaggcgaacgcg
gcgcccgcgttgctggaggtcgtggacgcggcgggcgccgagcacctggtcacgctccag
gacctggacatccgccacggcgacggctccgcggtgctcccgggcgtgtgcagcgaggcc
tcgttccgggccgtgaggccgccgagcaagcgcctgcgccggccgtgggaacccggggcc
gtcccgcgggtgctggtgggcacccaggccgacccggacgacgggcgccaggtgctgacg
gcgcggggccgcgaggggcgctccccgttcccggaggtcatggccaagagccagcggatg
gtggaccgggtgttcatgcaggcggtgcgcgagacggaggccttggtcccgcccgaggag
gaggtggagtgttgggaagttttctgttgtcccctggactccatccagaaaaagatggcc
ctggtggcagcctcgaagcgcggggagggaggctag

>gi568815584f:103235861_103441049|GENSCAN_predicted_peptide_2|92_aa
MLNNAESNAELKGLGVDSLVIEHLQVNKAPKMCHQTSRAHGGINPYMSSPCRIEMILTAK
EQIVPKPEDCPQEKDIPEETKTYGTGINSALK

>gi568815584f:103235861_103441049|GENSCAN_predicted_CDS_2|279_bp
atgcttaacaatgcagagagcaatgctgaactgaagggtttaggtgtagattctctggtc
attgagcacctccaagtgaacaaagcacctaagatgtgccaccagacctccagagctcat
ggtgggattaacccatacatgagctctccctgtcgcatcgaaatgatccttactgcgaag
gaacaaattgttcctaaaccagaagattgcccacaagaaaaagatatccctgaggaaaca
aaaacttatggcacaggaataaattcagcactaaaataa

>gi568815584f:103235861_103441049|GENSCAN_predicted_peptide_3|156_aa
MALTLFNSVKAERGEGDAEEKLKATRDFCETLRSPGEALECGYLEPCVCGEPLPRSKHGL
ARASHWTVAGKRYHYHPRFPEEGETEAERGQSSRWRPHNGSRIGAGQPPQRRVLRRNTVC
SCPPPLPGYGLSPSAPCKLETSGKTTFAKIMTVRET

>gi568815584f:103235861_103441049|GENSCAN_predicted_CDS_3|471_bp
atggccctcactctcttcaattctgtgaaggctgagagaggtgagggagatgcagaagaa
aagttgaaagccaccagagacttttgcgaaactcttcgaagtcctggagaggctctggag
tgtggctacttggagccctgtgtctgtggggagccgctgcctagatctaagcacggtctg
gctagagcttcccactggacagtggctggaaagcgctatcattatcaccctcgttttcct
gaggagggagaaactgaggctgagagaggccagtcatctcggtggaggccacataatgga
tccagaattggagctggacagccgccacaacgccgagtgttaaggaggaacacagtttgc
agctgccccccacccctgccaggctatggcttgtcaccatcagctccatgtaaactagag
actagtggtaaaaccacctttgcaaaaattatgacggtgagagaaacctga

>gi568815584f:103235861_103441049|GENSCAN_predicted_peptide_4|603_aa
MALNSDCDFIAAKRPIHPESETEDVPGMKDPGLGLKVEKQLIPRGPESGVPGEREREMSA
RCGENAVGFLSPKVAAAKTRPRKQFRGRWLLRPGSRHDAAACPRPGEGGDQPPSPPQGPN
RQRTAPGRPAPALTGVDRGRRWDSPSPLLGGGTWPGRSSLRFASASSDSDSGLYRASLHP
SPGRAALGLCLYLTKTVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFD
VKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNSCKACGYR
GMLDTHHKLCTFILKNPPENSDSGTGKKEKEKKNRKGKDKENGSVSSSETPPPPPPPNEI
NPPPHTMEEEEDDDWGEDTTEEAQRRRMDEISDHAKVLTLSDDLERTIEERVNILFDFVK
KKKEEGVIDSSDKEIVAEAERLDVKAMGPLVLTEVLFNEKIREQIKKYRRHFLRFCHNNK
KAQRYLLHGLECVVAMHQAQLISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKELA
KEIRVKAEPFIKWLKEAEEESSGGEEEDEDENIEVVYSKAASVPKVETVKSDNKDDDIDI
DAI

>gi568815584f:103235861_103441049|GENSCAN_predicted_CDS_4|1812_bp
atggctttaaattctgactgtgattttatcgcagcaaagcggccaatccaccccgagtcc
gaaacagaagacgtccctgggatgaaagacccaggcctggggcttaaggtggaaaaacaa
ctcattcctcgaggcccggagtcgggcgtcccgggagaacgggaaagggagatgagcgcc
cgctgcggggagaacgcggtcgggttcctctccccgaaggtggcagccgcaaaaacacgg
cctcgaaagcagtttcgaggacgatggctcctgcgtcccgggagtcgccatgacgccgcg
gcctgtcccagacccggcgagggaggggaccaaccaccatctccccctcaaggcccaaac
cgacaaagaacggcccccggtcgcccagctccggcgctgacgggtgtggaccgcggacgt
cgctgggacagcccctccccgctgctcggcggcggcacctggcccggccgctcctcgctg
cgcttcgcctccgcctcctcggactcggactcgggtttatatcgcgcctcacttcatccc
agtcccgggcgagcagcgttgggtttatgtctttatttgacgaaaacggttgagggcaaa
ggcaatggaatcaagacagttatagtcaacatggttgacgttgcaaaggcgcttaatcgg
cctccaacgtatcccaccaaatattttggttgtgagctgggagcacagacccagtttgat
gttaagaatgaccgttacattgtcaatggatctcatgaggcgaataagctgcaagacatg
ttggatggattcattaaaaaatttgttctctgtcctgaatgtgagaatcctgaaacagat
ttgcatgtcaatccaaagaagcaaacaataggtaattcttgtaaagcctgtggctatcga
ggcatgcttgacacacatcataaactctgcacattcattctcaaaaacccacctgagaat
agtgacagtggtacaggaaagaaagaaaaagaaaagaaaaacagaaagggcaaagacaag
gaaaatggctccgtatccagcagtgagacaccaccaccaccaccaccaccaaatgaaatt
aatcctcctccacatacaatggaagaagaggaggatgatgactggggagaagatacaact
gaggaagctcaaaggcgtcgaatggatgaaatcagtgaccatgcaaaagttctgacactc
agtgatgatttggaaagaacaattgaggagagggtcaatatcctctttgattttgttaag
aaaaagaaagaagagggtgttattgattcatctgacaaagaaatcgttgctgaagcagaa
agactggatgtaaaagccatgggccctcttgttctaactgaagttctttttaatgagaag
attagagaacagattaagaaatacaggcgccatttcctacgattttgtcacaacaacaaa
aaagcccaacggtaccttcttcatggtttggagtgtgtggtagcaatgcatcaagctcag
cttatctccaagattccacatatcttgaaggagatgtacgatgcagaccttttagaagaa
gaggtcatcatcagctggtcggaaaaggcctctaagaaatatgtctccaaagaacttgcc
aaagagattcgtgtcaaagcagaaccatttataaaatggttgaaggaggcagaggaagaa
tcttctggtggcgaagaagaagatgaagatgagaacattgaggtggtgtattcgaaggct
gccagtgtaccgaaagttgagactgtaaagtcagacaacaaggatgacgacatcgatatt
gatgccatttaa

>gi568815584f:103235861_103441049|GENSCAN_predicted_peptide_5|150_aa
MAEVKAGHLQKADNLRQSASVYVSPCQSMSVYVSPRQSMSVHVNLHQSMSVYVSAFQSTS
VHVSLQQSTSVHVSLRQSTSVHVSLRQSMSVYVSLRQSVSLCQSMLVYVSPCQSMPVYVS
LCQSMSKSVTNQSHGEVVPGRDHLAVRSRF

>gi568815584f:103235861_103441049|GENSCAN_predicted_CDS_5|453_bp
atggcagaagtgaaagctggccatctgcaaaaagcagataatctacgtcagtctgcatca
gtctatgtcagtccatgtcagtctatgtcagtctacgtcagtccacgtcagtctatgtca
gtccacgtcaatctacatcagtctatgtcagtctatgtcagtgcatttcagtctacatca
gtccatgtcagtctacaacagtctacgtcagtccacgtcagtctacgtcagtctacatca
gtccatgtcagtctacgtcagtccatgtcagtctacgtcagtctacgccagtctgtcagt
ctatgtcagtctatgttagtctatgtcagtccatgtcagtctatgccagtctatgttagt
ctatgtcagtctatgtcaaaaagtgtgaccaaccagagtcacggagaagtcgtgcctggt
cgggaccacctggcagtgagaagtcgattctaa

>gi568815584f:103235861_103441049|GENSCAN_predicted_peptide_6|380_aa
MALGDAGEKEPFAPAVILQLSDLLKMIDPHLVLDRQGLGDSEGQEAFSSSRTESSALRLQ
SAAGSDTHWLQGRETFTRSGAFDVLQMKEEHVLKFLVAGTHLGGTKLNFQMEQYICKRKS
DGIYIINLRRTWEKLLLAARAIVAIENPADTAVLKFAAATGATPVAGRFTPGTFTNQIQA
AFREPRLLVVTDPRADHRPLMEASYVNLPTIALCNTDSPLHYGDIAIPCDNKGAHSLGLM
WWTLAREVLRMRGTVSREHPWEVMPDLYFYRDPQEIKKEEQAAAEKAETKEEFQDQIHKP
WHLYWRCGKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVVDFKSKGNFDGTKGPAKVA
WKNVEEEYEEDEEEEERGGS

>gi568815584f:103235861_103441049|GENSCAN_predicted_CDS_6|1143_bp
atggccctgggggatgcaggagagaaagagccatttgcccctgcagtaattctccagctc
tcggatctgctgaagatgattgatccccatctagttctagatcggcaaggacttggagat
tcagaagggcaagaagccttctcaagctcacggacagaaagcagtgcccttagactccag
tctgctgctggctctgacacccactggctgcaaggcagggaaactttcacaaggtccgga
gcttttgatgtcctgcaaatgaaggaggagcatgtccttaagttccttgtggcaggaacc
cacttaggtggcaccaagcttaacttccagatggaacagtacatctgtaaaaggaaaagt
gatggcatctacatcataaatctgaggaggacctgggagaagcttctgctggcagctcgt
gccattgttgccattgaaaaccctgctgatacggctgtgctgaagtttgctgctgccact
ggagccactccagttgctggccgcttcactcctggaaccttcactaaccagatccaggca
gccttccgggagccacggcttcttgtggttactgaccccagggctgaccaccggccgctc
atggaggcatcttatgttaacctacctaccattgctctgtgtaacacagattctcctctg
cactatggggacattgccatcccatgtgacaacaagggagctcactcattgggtttgatg
tggtggacgctggctcgggaagttctgcgcatgcgtggcaccgtttcccgtgaacacccg
tgggaggtcatgcctgatctctacttctacagagatcctcaagagattaaaaaagaagag
caggctgctgctgaaaaggctgagacgaaagaggaatttcaggaccaaatccacaaaccc
tggcatctctactggagatgtggcaaaaagctgggtgagatgtggaataacttaaacgac
agtgaaaagcagccttacatcacaaaggcggcaaagctgaaggagaagtatgagaaggat
gttgttgactttaagtctaaaggaaactttgatggcacaaagggtcctgctaaagttgcc
tggaaaaatgtggaagaagaatatgaagaagatgaggaagaagaagaaagaggaggatca
tga

>gi568815584f:103235861_103441049|GENSCAN_predicted_peptide_7|262_aa
MVKEAIEFLHRAPERLVRETAGIIDVLRRPAREQRDTADFWRKRSDLAASWVTTACPLFP
ERSAGGNTRLQGTARGARMPPRRSANYNAQIPGLARAVPRRVPGLILSLPRRPRRGDREG
GSGGAEPAGGGLRFGPPASPCLRAPRDPGPPHLLLHSLPSHREFQLAGLHTAPPAAPENE
EAEEDVKEVERKTGRRGLWAPTMERAAEEAPAPDCFSLSSELAASASALLAAAAAAAPRH
LRASRSQDGRPSASSAASGCRK

>gi568815584f:103235861_103441049|GENSCAN_predicted_CDS_7|789_bp
atggtcaaggaggctatagagtttctacaccgagctcctgagcggctggtacgagagact
gccggcataatcgatgtacttcgcagacccgcccgcgaacagcgggacacggcagacttc
tggaggaaacggtccgacctggctgcctcctgggtgactacggcctgccctctatttcca
gagcgttcggctggggggaacacccgactgcaaggcactgcccgaggagcacgaatgcca
ccccgaaggtccgccaactacaacgcccagatcccgggcctggcccgggccgtcccccgg
cgggtcccggggctcattctctccctgcctcggcggccgaggcgaggagaccgggagggc
ggcagtggcggagccgagcctgcgggcggcgggctgcgcttcggcccgccggcgtcccct
tgcctcagggcgccccgcgatcctgggccccctcacctccttctccactccctcccgtcg
caccgcgaatttcagctcgcgggcctccacacagcgccgccggcggcgcctgaaaacgag
gaggcggaggaggatgtgaaggaagtggagcgcaagacaggccgccgcgggctgtgggcg
ccgaccatggagcgggctgcggaggaggcgcctgcgcccgactgcttctccctctctagc
gagcttgctgcctcagcctccgccctgctggccgccgctgccgccgccgcaccccggcac
ctcagagcctcacggagccaagatggccgcccctcggcttcctctgctgcctccggctgc
cggaagtga

>gi568815584f:103235861_103441049|GENSCAN_predicted_peptide_8|187_aa
MVELQISLKNYDPQKDKRFSGTVRLKSTPCPKCGSWGNSSTVTRPRPRISPQVDTEVPKK
LKNKNLVKKLAKKYDAFLASESLIKQIPRILGIGLTKAVKFPSLLTHDENTVAKVDEAKS
TIKFHMNMLCLAVAVGHVKMTDDELVHNIHLAVNFLVSLLEKKLAECPGLIYQEHHGQAP
APILRHI

>gi568815584f:103235861_103441049|GENSCAN_predicted_CDS_8|564_bp
atggtggagttgcagatcagcttgaagaactatgacccccagaaggacaagcgcttctcg
ggcaccgtcaggcttaagtccactccctgtcccaagtgtgggtcctgggggaacagcagc
actgtgacgagaccaaggccacggatatccccccaagtggacactgaggtgccaaaaaaa
ctcaagaataagaatctggtcaagaagctggccaagaagtatgatgcatttttggcttca
gagtctctgataaagcaaatcccacgaatcctcggcataggcctaacaaaggcagtaaag
ttcccttccctgctcacacacgatgaaaacacggtggccaaagtggatgaggcgaagtcc
acaatcaagtttcatatgaacatgttatgtttggctgtggctgttggccacgtgaagatg
acagacgatgagcttgtgcataacattcacctggctgttaacttcttggtgtcactgctc
gagaaaaaactggcagaatgtccgggccttatatatcaagagcaccacgggcaagcccca
gcgcctatattaaggcatatttga

>gi568815584f:103235861_103441049|GENSCAN_predicted_peptide_9|100_aa
MISMDYGKRMEVTIEGKKSGERLCHDQGISSNSALHLSSKTANEPTPIRSKRLCFLLGIL
QDTGPEDPPLKKASIAKVQGMSLEFLYIKHSHTFWSLLHF

>gi568815584f:103235861_103441049|GENSCAN_predicted_CDS_9|303_bp
atgatttctatggactatggaaaaagaatggaagtgacaatagaagggaagaaaagtgga
gagaggctttgccatgaccagggaatatcaagtaactcggctttgcacctgagctccaaa
acagcaaatgagcccacccccataagatcaaagaggctgtgcttcctactgggcatcctg
caggacacaggcccagaagacccacccctgaagaaagcatctatagccaaagtccaggga
atgagcttggagtttctctacatcaaacattctcacactttttggtcccttttacacttt
taa