GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:16:00

Sequence gi568815586r:49129724_49286834 : 157111 bp : 45.48% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +    634    885  252  0  0   58   42   189 0.576   6.68
 1.02 PlyA +   3330   3335    6                               1.05

 2.05 PlyA -   3742   3737    6                               1.05
 2.04 Term -  56267  55287  981  2  0  117   39  1076 0.983  97.67
 2.03 Intr -  56735  56587  149  0  2  115   84   359 0.999  38.15
 2.02 Intr -  57110  56888  223  2  1  115   97   237 0.947  25.00
 2.01 Init -  58696  58694    3  1  0   91  101     0 0.427   1.60
 2.00 Prom -  64970  64931   40                              -5.06

 3.00 Prom +  72434  72473   40                              -5.66
 3.01 Init +  86499  86613  115  2  1   68   85    61 0.570   4.17
 3.02 Intr +  98368  98443   76  2  1   62  116    72 0.323   5.97
 3.03 Term + 102187 102235   49  1  1   77   52    50 0.078  -2.92
 3.04 PlyA + 102537 102542    6                               1.05

 4.03 PlyA - 103097 103092    6                               1.05
 4.02 Term - 104344 104067  278  2  2   66   37   180 0.634   6.32
 4.01 Init - 114580 114532   49  1  1   88   65    41 0.517   2.91
 4.00 Prom - 132767 132728   40                              -4.46

 5.00 Prom + 135320 135359   40                              -0.26
 5.01 Init + 135459 135704  246  2  0   74   47   107 0.298   0.80
 5.02 Intr + 139742 139964  223  1  1  129   97   270 0.974  29.70
 5.03 Intr + 140105 140253  149  0  2  108  119   344 0.999  39.45
 5.04 Term + 142530 143504  975  2  0   80   37  1113 0.991  97.46
 5.05 PlyA + 143586 143591    6                               1.05

 6.03 PlyA - 143841 143836    6                               1.05
 6.02 Term - 148044 147935  110  1  2  103   44   103 0.422   6.07
 6.01 Init - 155330 155180  151  2  1   73   70    69 0.447   1.80

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:49129724_49286834|GENSCAN_predicted_peptide_1|83_aa
MNEQFRARALAPPGGAAEARNGHVCKGAAQAAHPPLPAGIGLSLTPPQQSERSRRLSAAQ
IWVKIRFPFPQNPLLPPPAPLNS

>gi568815586r:49129724_49286834|GENSCAN_predicted_CDS_1|252_bp
atgaatgagcaattccgggcgcgcgctcttgcgccccccggcggtgctgcagaggcacga
aatggccacgtctgcaaaggcgctgcccaagccgcccatcctcccttgcctgccggcatc
gggctcagcctaacacctccacagcagtctgagcgcagtaggagattatcggcggcccag
atctgggtcaagatccgatttccgttccctcaaaatcccttactgccaccacctgctccc
ctgaattcctaa

>gi568815586r:49129724_49286834|GENSCAN_predicted_peptide_2|451_aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY

>gi568815586r:49129724_49286834|GENSCAN_predicted_CDS_2|1356_bp
atgcgtgagtgcatctccatccacgttggccaggctggtgtccagattggcaatgcctgc
tgggagctctactgcctggaacacggcatccagcccgatggccagatgccaagtgacaag
accattgggggaggagatgattccttcaacaccttcttcagtgagacgggggctggcaag
catgtgccccgggcagtgtttgtagacttggaacccacagtcattgatgaagttcgcact
ggcacctaccgccagctcttccaccctgagcaacttatcacaggcaaagaagatgctgcc
aataactatgcccgagggcactacaccattggcaaggagatcattgacctcgtgttggac
cgaattcgcaagctggccgaccagtgcacgggtctccagggcttcttggttttccacagc
tttggtgggggaactggttctgggttcacctcgctgctcatggaacgtctctcagttgat
tatggcaagaagtccaagctggagttctctatttacccggcgccccaggtttccacagct
gtagttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgatattgag
cgtccaacctatactaacctgaataggttaataggtcaaattgtgtcctccatcactgct
tccctgagatttgatggagccctgaatgttgacctgacagaattccagaccaacctggtg
ccctatccccgcatccacttccctctggccacatatgcccctgtcatctctgctgagaaa
gcctaccatgaacagctttctgtagcagagatcaccaatgcttgctttgagccagccaac
cagatggtgaaatgtgaccctcgccatggtaaatacatggcttgctgcctgttgtaccgt
ggtgacgtggttcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgtacc
atccagtttgtggattggtgccccactggcttcaaggttggcatcaactaccagcctccc
actgtggtgcctggtggagacctggccaaggtacagagagctgtgtgcatgctgagcaac
accacagccattgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aaacgtgcctttgttcactggtacgttggggaggggatggaggaaggtgagttttcagag
gcccgtgaggacatggctgcccttgagaaggattatgaggaggttggtgtggattctgtt
gaaggagagggtgaggaagaaggagaggaatactaa

>gi568815586r:49129724_49286834|GENSCAN_predicted_peptide_3|79_aa
MASLSLTGHPTDEEPRPESGVTMPKRQSQVVAEPRWKPGLFSSLRLLTHAHPAKAEENLA
VIQSFRIIVEACLNVTYRT

>gi568815586r:49129724_49286834|GENSCAN_predicted_CDS_3|240_bp
atggcatccctgtccctcactggtcatcctactgacgaggagcctagaccagaaagtgga
gtgaccatgccaaagaggcagagccaggtggtggcggaaccacgctggaagccaggactc
ttcagctccctgcgccttttaacacatgcacatccagcaaaagcagaggagaacctggct
gtgattcaaagcttcagaattattgtagaagcttgcctgaacgtcacctatagaacctga

>gi568815586r:49129724_49286834|GENSCAN_predicted_peptide_4|108_aa
MTKQCVEFENENTVVSGASAIICLLRVTVIQWESLVVPPFSTYGCGPQEDDGLRFCSGAS
PVAGNCNPQDDARAQLPSFYVAEFMLPCTEQTLSLTQPCPSPCPVIPE

>gi568815586r:49129724_49286834|GENSCAN_predicted_CDS_4|327_bp
atgaccaaacaatgtgtggaatttgaaaatgaaaatactgtggtgagtggagcctctgca
atcatctgcttattgcgcgtcaccgtcatccagtgggagagccttgtggtaccacctttc
tccacctatggctgcggcccgcaggaagatgacgggttgcgcttctgctctggagccagc
cctgttgccgggaactgcaacccgcaagatgatgccagagctcagcttccctctttttat
gttgcagagtttatgctgccctgcactgagcagacgctttcgcttacgcagccctgccct
tcaccttgcccagtgattccggaataa

>gi568815586r:49129724_49286834|GENSCAN_predicted_peptide_5|530_aa
MVSGVPSGLGKSARPRGRRARKLLPAPRAAPRTAPDYPGPLRLTWLVAAGLEGRVHLADT
SSGRKTWPGCGHQWKWKALLILRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD
KTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDA
ANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSV
DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI
ERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAE
KAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR
TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMY
AKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGEDEGEEY

>gi568815586r:49129724_49286834|GENSCAN_predicted_CDS_5|1593_bp
atggtgagtggggttccctcggggctggggaagagtgcgcgtcccaggggacggcgggcc
cggaaactactgcctgcacctcgggccgcgcccaggacagctccagactaccccgggccc
ctccggttaacctggcttgtggcggccgggctggaaggtcgagttcacttggcagacacc
agttcgggccggaaaacctggcccgggtgcggccatcagtggaaatggaaagccctcttg
atcctacgtgagtgcatctccatccacgttggccaggctggtgtccagattggcaatgcc
tgctgggagctctactgcctggaacacggcatccagcccgatggccagatgccaagtgac
aagaccattgggggaggagatgattccttcaacaccttcttcagtgaaacgggtgctggc
aagcatgtgccccgggcagtgtttgtagacttggaacccacagtcattgatgaagttcgc
actggcacttaccgccagctcttccaccctgagcaactcatcacaggcaaggaagatgct
gccaataactatgcccgagggcactacaccattggcaaggagatcattgacctcgtgttg
gaccgaattcgcaagctggctgaccagtgcaccggtcttcagggcttcttggttttccac
agctttggtgggggaactggttctgggttcacctcgctgctcatggaacgtctctcagtt
gattatggcaagaagtccaagctggagttctccatttacccggcgccccaggtttccaca
gctgtagttgagccctacaactccatcctcaccacccacaccaccctggagcactctgat
tgtgccttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgatatc
gagcgcccaacctacactaaccttaaccgccttattagccagattgtgtcctccatcact
gcttccctgagatttgatggagccctgaatgttgacctgacagaattccagaccaacctg
gtgccctacccccgcatccacttccctctggccacatatgcccctgtcatctctgctgag
aaagcctaccacgaacagcttactgtagcagagatcaccaatgcttgctttgagccagcc
aaccagatggtgaaatgtgaccctcgccatggtaaatacatggcttgctgcctgttatac
cgtggtgacgtggttcccaaagatgtcaatgctgccattgccaccatcaaaaccaagcgt
accatccagtttgtggattggtgccccactggcttcaaggttggcattaattaccagcct
cccactgtggtgcctggcggagacctggccaaggtacagagagctgtgtgcatgctgagc
aataccacagctgttgccgaggcctgggctcgcctggaccacaagtttgacctgatgtat
gccaagcgtgcctttgttcactggtacgtgggtgaggggatggaggaaggcgagttttca
gaggcccgtgaggacatggctgcccttgagaaggattatgaggaggttggagcagatagt
gctgacggagaggatgagggtgaagagtattaa

>gi568815586r:49129724_49286834|GENSCAN_predicted_peptide_6|86_aa
MLPKLVSNSWAQAICLEWQGLEWLNSRGCDEGQVIGSEASRTREKEVFEEDSRPGIGLLE
PSAWVISASFTLPPQLTGTDHSGPGA

>gi568815586r:49129724_49286834|GENSCAN_predicted_CDS_6|261_bp
atgttgcccaagctggtctcgaactcctgggctcaggcaatctgcctggaatggcagggg
cttgaatggctgaactccagggggtgtgatgaaggacaagttattgggagtgaggccagc
aggactagggagaaagaggtttttgaggaagatagtcgccctggcattgggctcctggag
ccatctgcctgggtcatctctgccagcttcaccttgccgcctcagctgacgggcactgac
cactctggccctggagcatag