GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:17:44

Sequence gi568815597r:7820838_8039994 : 219157 bp : 44.31% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1385   1387    3  1  0  108   81     0 0.441   1.30
 1.02 Intr +   4054   4081   28  0  1  102  105    -9 0.681  -0.11
 1.03 Intr +   5643   5873  231  1  0   80  102   167 0.947  15.04
 1.04 Intr +   6281   6486  206  0  2  112    4   162 0.502   9.12
 1.05 Intr +   9074   9324  251  1  2   22   72   220 0.381  10.04
 1.06 Intr +  16162  16312  151  1  1  107   82   181 0.924  19.56
 1.07 Term +  16572  16583   12  2  0   64   46    -7 0.215  -9.10
 1.08 PlyA +  17062  17067    6                               1.05

 2.07 PlyA -  17360  17355    6                               1.05
 2.06 Term -  19330  19046  285  1  0  -27   43   298 0.912   9.20
 2.05 Intr -  22900  22783  118  0  1  101   91    -3 0.603   1.77
 2.04 Intr -  25670  25547  124  0  1   50   39    96 0.539   0.54
 2.03 Intr -  30085  29975  111  2  0   54   98    60 0.528   3.95
 2.02 Intr -  55594  55532   63  2  0   75   93    29 0.000   0.79
 2.01 Init -  80198  80129   70  2  1   35  111    51 0.158   3.31
 2.00 Prom -  95556  95517   40                              -3.36

 3.00 Prom + 105015 105054   40                              -0.16
 3.01 Sngl + 133081 133419  339  0  0   59   41   152 0.547   3.63
 3.02 PlyA + 133959 133964    6                               1.05

 4.00 Prom + 140119 140158   40                              -3.06
 4.01 Init + 141949 142038   90  0  0   72   98   117 0.975  11.62
 4.02 Intr + 144487 144588  102  0  0   74   68    74 0.925   4.37
 4.03 Intr + 150057 150126   70  2  1   61   66   107 0.932   4.55
 4.04 Intr + 156815 156901   87  0  0   66  107    59 0.900   5.54
 4.05 Intr + 164057 164187  131  0  2  120   11   161 0.066  12.01
 4.06 Intr + 165120 165191   72  2  0   17   99    69 0.052   0.50
 4.07 Intr + 169231 169884  654  0  0  -77   19  1633 0.819 131.97
 4.08 Term + 182546 182668  123  1  0   75   50    70 0.294   0.28
 4.09 PlyA + 185872 185877    6                               1.05

 5.04 PlyA - 186500 186495    6                               1.05
 5.03 Term - 193559 192373 1187  0  2   95   41   496 0.844  37.52
 5.02 Intr - 194547 194471   77  2  2   88   76    13 0.609  -0.74
 5.01 Init - 194707 194658   50  1  2   95  106    21 0.536   5.02
 5.00 Prom - 196856 196817   40                              -8.26

 6.00 Prom + 197167 197206   40                              -0.16
 6.01 Init + 206288 206324   37  1  1   84   89    37 0.322   3.67
 6.02 Term + 206585 206706  122  0  2   86   44    95 0.328   3.54
 6.03 PlyA + 206736 206741    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 164057 164217  161  0  2  120   43   183 0.892  15.10


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:7820838_8039994|GENSCAN_predicted_peptide_1|293_aa
MVVFSSHECPARDATLFCEPWTLNMQPAPLTSEEFKHVGLTAAVLSAHTQKEEQNYVDKF
REKILSSPYSSYLQQESRSKAKYSYFQGDSTSKQTRSAGCRKGKHKRKKLPEPPDSSSSN
TGSGPRRGAHQNAQPCCPSAASSPHTSSPTFPPAAMGESIPSYCQRSVHRIASHEESIPS
YCQRSVHRIASHEESIPSYCQHTVHGIASQQDSIPSYCHCSVHGVTSQRIPIQNWFSSIR
VKEVVLKEDLEKLESMRQQQPQFSHGQKEELAKVYNWIQSQTVTQEIDIQLEC

>gi568815597r:7820838_8039994|GENSCAN_predicted_CDS_1|882_bp
atggtggttttttcctcccatgaatgccctgccagggatgctaccctcttctgtgagccc
tggaccctgaacatgcagccagcccctttgacctcggaagaatttaaacacgtggggctc
acagcggctgttctgtcagcgcacacccagaaggaagagcagaattatgttgataaattc
cgagaaaagatcctgtcatcaccctacagctcctatcttcagcaagaaagcaggagcaaa
gctaaatattcatattttcaaggagattctacttccaagcagacgcggtcggccggctgc
aggaaagggaagcacaagcggaagaagctgccggagccgccagacagcagcagctcgaac
accggctctggtccccgcaggggagcgcatcagaacgcacagccctgctgcccctccgcg
gcctcctctccgcacacctcgagcccgaccttcccacctgccgccatgggagaatccatc
ccatcctactgccagcgctctgtccacaggatcgcctcccatgaagaatccatcccatcc
tactgccagcgctctgtccacaggatcgcctcccatgaagaatccatcccatcctactgc
cagcacactgtccatgggattgcctcccagcaggactccatcccatcctactgccactgt
tctgtccacggggtcacctcccagcgaatccccatccagaactggttcagcagcatcagg
gttaaagaagttgtactaaaagaagacctggaaaagctagaaagtatgaggcagcagcag
ccccagttttctcatgggcaaaaggaggagctggctaaggtgtataattggattcaaagc
cagactgtcactcaagaaatcgacattcaattggaatgttag

>gi568815597r:7820838_8039994|GENSCAN_predicted_peptide_2|256_aa
MIREIETEVKIFVKLNLDLDDFPAHAGTSIGGNRLGGPIFRPPKAPHEDARLTPEELERA
SLLQILPEMLGAERGDILRKAEGSATTKEQHTTCVNLVTDHHKFPREYRSQSVYPKDIKN
LAGPHNTALFKGKQKAVPVRPVVGLERPLLYKLIGKKELTVLRDSKADLSRQKKEYTYED
RTIETVKSDEQKEKRLKKSQQGLEDMWETIEWTNISTTGAPEEEKEKEAERLFEKIMAEN
SPSLMKNMNVKVQEAK

>gi568815597r:7820838_8039994|GENSCAN_predicted_CDS_2|771_bp
atgattagggaaattgaaacagaagtaaaaatctttgtcaaattaaacttagacctggat
gactttccagcacatgctggcaccagcattggtggcaacaggctgggtggacccatcttc
aggcccccaaaagcacctcatgaagacgcgcgcttaactccggaggagctagaaagagct
tcccttctacagatactgccagagatgctgggtgcagaaagaggggatattctcaggaaa
gcagaggggtctgcaacaaccaaagagcaacacacgacttgtgtcaatcttgtcactgac
catcacaagtttcctagagagtacaggtctcagagcgtttaccctaaagacatcaagaac
ttggccggtccccacaacactgccctgttcaagggcaaacaaaaggcagtgccagtcaga
cctgtggtagggctggagcgacctcttttgtataaattgattggaaagaaagagttaact
gttttgagggattcaaaagccgatctaagcaggcagaagaaagaatacacgtatgaagac
cggacaattgaaactgtcaagtccgacgaacagaaagaaaaaagactgaagaaaagtcaa
cagggcctggaggacatgtgggaaaccatcgagtggaccaacataagcactacaggggcc
ccagaggaagaaaaagagaaagaggcagaaagattattcgaaaaaataatggctgaaaac
tccccaagtttgatgaaaaacatgaatgtaaaagtccaagaggctaaatga

>gi568815597r:7820838_8039994|GENSCAN_predicted_peptide_3|112_aa
MGTGKSSSFFAEPAGCGHQNESGPSRCQGLDLPPCIRQAAHTPRKSARSLRQSDSRAQRP
TRDALKEVTFRGCYSQTRPSSTRRIYVGSDPCKHRRDRASGWEHATVPPTAT

>gi568815597r:7820838_8039994|GENSCAN_predicted_CDS_3|339_bp
atgggaacaggcaaatcgtcgtcgttctttgctgagcctgcgggctgcggtcaccagaac
gaatctgggcccagcaggtgccaagggctcgacctcccgccttgcatccggcaggccgca
cacacccctcggaagtcggcgagatcgctgaggcaaagcgactccagggcgcagagaccc
acacgcgacgctctaaaggaagtgacctttaggggctgttactctcagaccaggcccagc
agcacccggcgcatttacgtcggatctgacccctgcaagcaccggcgcgaccgcgctagc
ggctgggaacacgcgacggtcccgcccactgcgacctga

>gi568815597r:7820838_8039994|GENSCAN_predicted_peptide_4|442_aa
MASKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLED
AKKESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGSKVTTHPLAKDKMMNGGHYT
YSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQFLLGGHMIQTQPIRALFTTG
RVTQNVNAGFTTITITTTTITITISIIINIPTVVTTTTITITIITITITIITITTTVITI
TLTTLTITLTTITTLTTTTITTIITTSITLTTITITTTITFTTTTTITTSITLTITLTTT
ITTLTTTITITTSITLTTTITITTTITFTTTTITTSITFTITLTTTITTTNTITLTTTII
TITTTITITLTTTITISITTTTTTVTIIITTIIIFFTSCSLQEKDLPTSGFVTRKGIENI
SSKSGYQILEGNLSDLESVMEK

>gi568815597r:7820838_8039994|GENSCAN_predicted_CDS_4|1329_bp
atggcttccaaaagagctctggtcatcctggctaaaggagcagaggaaatggagacggtc
atccctgtagatgtcatgaggcgagctgggattaaggtcaccgttgcaggcctggctgga
aaagacccagtacagtgtagccgtgatgtggtcatttgtcctgatgccagccttgaagat
gcaaaaaaagagtctgctgctgtgaaggagatactgaaggagcaggaaaaccggaagggc
ctgatagccgccatctgtgcaggtcctactgctctgttggctcatgaaataggttttgga
agtaaagttacaacacaccctcttgctaaagacaaaatgatgaatggaggtcattacacc
tactctgagaatcgtgtggaaaaagacggcctgattcttacaagccgggggcctgggacc
agcttcgagtttgcgcttgcaattgttgaagccctgaatggcaaggaggtggcggctcaa
ttcctcctgggcgggcacatgatccagacccagccaatccgagccctgtttaccactggc
cgtgtgacccagaatgtgaatgctggattcaccaccatcaccatcaccaccaccacaatc
actatcaccatctccatcatcatcaacatccccactgttgtcaccaccaccaccatcact
atcaccatcattaccatcaccatcaccatcatcaccatcactaccaccgtcatcaccatc
accctcaccaccctcaccatcaccctcaccactatcaccacactcaccaccaccaccatc
accaccatcattaccaccagcatcaccctcaccaccatcaccatcaccaccaccatcacc
ttcaccaccaccaccaccatcaccaccagcatcaccctcaccatcaccctcaccaccacc
atcaccacactcaccaccaccatcaccatcaccaccagcatcaccctcaccaccaccatc
accatcaccaccaccatcaccttcaccaccaccaccatcaccaccagcatcaccttcacc
atcaccctcaccaccaccatcaccactaccaacaccatcaccctcaccactaccatcatc
accatcaccaccaccatcaccatcaccctcaccaccaccatcaccatcagcatcaccacc
accaccaccaccgtcaccatcattatcaccaccatcatcatctttttcacttcttgcagc
ttgcaggaaaaagacctgccaacatcaggatttgtaaccagaaaaggcattgaaaacata
tcctcaaaatcaggctatcaaattttagaaggaaacctttcagacctagaatcagttatg
gagaagtga

>gi568815597r:7820838_8039994|GENSCAN_predicted_peptide_5|437_aa
MGNMRKTYWSSRSEFKNNFLNIDPITMAYSLNSSAQERLIPLGHASKSAPMNGHCFAENG
PSQKSSLPPLLIPPSENLGPHEEDQVVCGFKKLTVNGVCASTPPLTPIKNSPSLFPCAPL
CERGSRPLPPLPISEALSLDDTDCEVEFLTSSDTDFLLEDSTLSDFKYDVPGRRSFRGCG
QINYAYFDTPAVSAADLSYVSDQNGGVPDPNPPPPQTHRRLRRSHSGPAGSFNKPAIRIS
NCCIHRASPNSDEDKPEVPPRVPIPPRPVKPDYRRWSAEVTSSTYSDEDRPPKVPPREPL
SPSNSRTPSPKSLPSYLNGVMPPTQSFAPDPKYVSSKALQRQNSEGSASKVPCILPIIEN
GKKVSSTHYYLLPERPPYLDKYEKFFREAEETNGGAQIQPLPADCGISSATEKPDSKTKM
DLGGHVKRKHLSYVVSP

>gi568815597r:7820838_8039994|GENSCAN_predicted_CDS_5|1314_bp
atggggaatatgaggaagacctactggagcagtcgcagtgagtttaaaaacaacttttta
aatattgacccgataaccatggcctacagtctgaactcttctgctcaggagcgcctaata
ccacttgggcatgcttccaaatctgctccgatgaatggccactgctttgcagaaaatggt
ccatctcaaaagtccagcttgccccctcttcttattcccccaagtgaaaacttgggacca
catgaagaggatcaagttgtatgtggttttaagaaactcacagtgaatggggtttgtgct
tccacccctccactgacacccataaaaaactccccttcccttttcccctgtgcccctctt
tgtgaacggggttctaggcctcttccaccgttgccaatctctgaagccctctctctggat
gacacagactgtgaggtggaattcctaactagctcagatacagacttccttttagaagac
tctacactttctgatttcaaatatgatgttcctggcaggcgaagcttccgtgggtgtgga
caaatcaactatgcatattttgataccccagctgtttctgcagcagatctcagctatgtg
tctgaccaaaatggaggtgtcccagatccaaatcctcctccacctcagacccaccgaaga
ttaagaaggtctcattcgggaccagctggctcctttaacaagccagccataaggatatcc
aactgttgtatacacagagcttctcctaactccgatgaagacaaacctgaggttcccccc
agagttcccatacctcctagaccagtaaagccagattatagaagatggtcagcagaagtt
acttcgagcacctatagtgatgaagacaggcctcccaaagtaccgccaagagaacctttg
tcaccgagtaactcgcgcacaccgagtcccaaaagccttccgtcttacctcaatggggtc
atgcccccgacacagagctttgcccctgatcccaagtatgtcagcagcaaagcactgcaa
agacagaacagcgaaggatctgccagtaaggttccttgcattctgcccattattgaaaat
gggaagaaggttagttcaacacattattacctactacctgaacgaccaccatacctggac
aaatatgaaaaattttttagggaagcagaagaaacaaatggaggcgcccaaatccagcca
ttacctgctgactgcggtatatcttcagccacagaaaagccagactcaaaaacaaaaatg
gatctgggtggccacgtgaagcgtaaacatttatcctatgtggtttctccttag

>gi568815597r:7820838_8039994|GENSCAN_predicted_peptide_6|52_aa
MKDVKGQCGTVDGLCLLRRPELAPTSFGFGEATDAQGQSPSGPVGGGFSGRQ

>gi568815597r:7820838_8039994|GENSCAN_predicted_CDS_6|159_bp
atgaaggatgtcaagggacagtgtgggacagtggacggtttgtgtttactcaggcgacct
gagctggccccgacgtcttttggctttggagaggccacggatgcccaaggacaaagcccc
agcgggcctgtgggaggaggtttctcggggcgccagtga