GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:18:53

Sequence gi568815593f:134271596_134490350 : 218755 bp : 43.29% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    272    267    6                               1.05
 1.07 Term -  14964  14778  187  2  1   93   44   133 0.160   6.36
 1.06 Intr -  36871  36543  329  1  2   66   83   194 0.612  11.20
 1.05 Intr -  37132  36979  154  0  1   45  116    46 0.402   3.17
 1.04 Intr -  40785  40697   89  0  2  106   80    14 0.312   1.17
 1.03 Intr -  47902  47763  140  2  2  129   50    -4 0.220   0.08
 1.02 Intr -  50308  50196  113  0  2   76   69    60 0.107   2.92
 1.01 Init -  52640  52561   80  2  2   69   75    -3 0.094  -2.97
 1.00 Prom -  60192  60153   40                              -2.46

 2.02 PlyA -  60470  60465    6                              -0.45
 2.01 Sngl -  62473  60710 1764  1  0   70   50   451 0.640  34.16
 2.00 Prom -  63426  63387   40                              -9.16

 3.05 PlyA -  63604  63599    6                               1.05
 3.04 Term -  64790  64542  249  2  0   67   48   173 0.154   6.90
 3.03 Intr -  78227  78197   31  1  1   98   87   -15 0.066  -2.47
 3.02 Intr -  78832  78654  179  1  2   98   53   113 0.364   7.52
 3.01 Init -  80602  80576   27  1  0   57  115    44 0.560   3.60
 3.00 Prom -  84431  84392   40                              -3.66

 4.00 Prom +  91031  91070   40                               1.14
 4.01 Init +  95373  95608  236  2  2   53   -2   141 0.183  -2.33
 4.02 Intr +  99976 100044   69  1  0   87   91    67 0.379   5.20
 4.03 Intr + 102788 102868   81  2  0   66   92    41 0.345   1.05
 4.04 Intr + 105074 105099   26  2  2   88  115    18 0.620   2.17
 4.05 Intr + 109124 109213   90  0  0  127  115    25 0.875   9.07
 4.06 Intr + 116730 116818   89  1  2   64  111   -27 0.458  -3.11
 4.07 Term + 118630 118758  129  0  0   90   38    97 0.683   3.08
 4.08 PlyA + 120375 120380    6                               1.05

 5.04 PlyA - 122375 122370    6                               1.05
 5.03 Term - 124495 124298  198  1  0   46   33    95 0.057  -2.80
 5.02 Intr - 138407 138308  100  1  1   73   94    82 0.867   7.41
 5.01 Init - 140259 140021  239  0  2  108   80   419 0.992  38.58
 5.00 Prom - 143611 143572   40                              -6.06

 6.00 Prom + 147976 148015   40                              -2.56
 6.01 Sngl + 151243 151449  207  0  0   69   38   228 0.703  11.14
 6.02 PlyA + 151766 151771    6                               1.05

 7.00 Prom + 158420 158459   40                              -4.06
 7.01 Init + 164677 164736   60  0  0  114   57    14 0.505   2.41
 7.02 Intr + 164911 165055  145  0  1   55  105    31 0.496   1.36
 7.03 Intr + 189014 189259  246  0  0   90   84    67 0.171   3.93
 7.04 Intr + 190725 190833  109  1  1   35   44    85 0.381  -1.86
 7.05 Term + 193566 193845  280  0  1   36   41   149 0.121  -0.08
 7.06 PlyA + 204639 204644    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  64856  64542  315  2  0   78   48   193 0.823  10.25


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:134271596_134490350|GENSCAN_predicted_peptide_1|363_aa
MNESTCCLPSSPAFDVVSILDFRHSNRPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKI
VLKVGNLSPHLQNIFSKSPIFAGVVLPQVQHPKNARKKYPKLNGLLADIVHACLQIDPAD
RISSSDLLHHEYFTRDGFIEKFMPELKAKLLQEAKVNSLIKPKESSKENELRKDERKTVY
TNTLLSSSVLGKEIEKEKKPKEIKVRVIKVKGGRGDISEPKKKEYEGGLGQQDANENVHP
MSPDTKLVTIEPPNPINPSTNCNGLKENPHCGGSVTMPPINLTNSNLMAANLSSNLFHPS
VRYVFISGMKTDQYSELVPVEWGIAEKIPKNVEATLELGNRQRFEQFGELRRRQENVGKF
GTF

>gi568815593f:134271596_134490350|GENSCAN_predicted_CDS_1|1092_bp
atgaatgagagtacctgttgtttgccatcctcacctgcatttgatgttgtcagtattttg
gattttaggcattctaatagacctgtggatatctgggctttgggctgtatgatcattgag
atggccactggaaatccctatcttcctagtagttctgatttggatttactccataaaatt
gttttgaaagtgggcaatttgtcacctcacttgcagaatatcttttccaagagccccatt
tttgctggggtagttcttcctcaagttcaacaccccaaaaatgcaagaaaaaaatatcca
aagcttaatggattgttggcagatatagttcatgcttgtttacaaattgatcctgctgac
aggatatcatctagtgatcttttgcatcatgagtattttactagagatggatttattgaa
aaattcatgccagaactgaaagctaaattactgcaggaagcaaaagtcaattcattaata
aagccaaaagagagttctaaagaaaatgaactcaggaaagatgaaagaaaaacagtttat
accaatacactgctaagtagttcagttttgggaaaggaaatagaaaaagagaaaaagccc
aaggagatcaaagtcagagttattaaagtcaaaggaggaagaggagatatctcagaacca
aaaaagaaagagtatgaaggtggacttggtcaacaggatgcaaatgaaaatgttcatcct
atgtctccagatacaaaacttgtaaccattgaaccaccaaaccctatcaatcccagcact
aactgtaatggcttgaaagaaaatccacattgcggaggttctgtgacaatgccacccatc
aatctaactaacagtaatttgatggctgcaaatctcagttcaaatctctttcaccccagt
gtgaggtacgtctttatcagcggcatgaagacagaccaatacagtgaattggtaccagta
gagtggggcattgctgaaaagatacccaaaaatgtggaagcaactttggaactgggtaac
aggcagaggtttgaacagtttggagagctcagaagaagacaggaaaatgtgggaaagttt
ggaactttctag

>gi568815593f:134271596_134490350|GENSCAN_predicted_peptide_2|587_aa
MDKFLDIYTLPRLNQEDVESLNRPITGSEIEPIINSLPTKKSPGPDGFIAKFYQRYKQEL
VPFLLKLFPSVEKEGLLPNSFYEASIIMIQKPGRNTTKQNFRPISMMNIDAKILNKILAN
QIQQHIKKLIHHDQVSFIPGMQAWFNIHKSVNVIHHINRTNDKNHMIISIDAEKAFDKIQ
QHFLLKTLNKLGIDGMYLKIRAIYDKPTANIILHGQKLEAFPLKTGTRQGCPLSPLLFST
VLEVLARAIRQEKEIKGIQLGKEGVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSG
YKINVQKSQAFLQKSQAFLYTKNRQTESQIMSELPFTITTNRIKYLGIQLTRDMKDLFKE
NYKPLLKEIREDTNKWKNIPCPWTGRINIVKMAILAKVVYRFNAIPKKLPLAFFTELEKT
TLKFTWNQKRARIAKTILSKKNKAGGITLPDFKLYYKATVIKIAWYWYQNRYIDQWNRTE
ASEMTAHIYNHLIFDKPDKNKEWGKNSLFNKRCWENWLATCRKLKLDPFLSPYTKINSRW
IKDLNVRPKTIKTLKENLGNTIQDIGMGKDFMTKTPKAMATKAKIDK

>gi568815593f:134271596_134490350|GENSCAN_predicted_CDS_2|1764_bp
atggataaattcctggacatatacactctcccaagactaaaccaggaagatgttgaatct
ctgaatagaccaataacaggttctgaaattgagccaataattaatagcctaccaaccaaa
aaaagtccaggaccagatggattcatagccaaattctaccagaggtacaaacaggagctg
gtaccattccttctgaaactattcccatcagtagaaaaagagggactcctccctaactca
ttttatgaggccagcatcatcatgatacaaaagcctggcagaaacacaacaaaacagaat
tttaggccaatatcaatgatgaacattgatgcaaaaatcctcaataaaatactggcaaac
caaatccagcagcacatcaaaaagcttatccaccacgatcaagtcagcttcatccctggg
atgcaagcctggttcaacatacacaaatcagtaaacgtaatccatcacataaacagaacc
aatgacaaaaaccacatgattatctcaatagatgcagaaaaggccttcgacaaaattcaa
cagcatttcttgctaaaaactctgaataaactaggtattgatggaatgtatctcaaaata
agagctatttatgacaaacccacagccaatattatactgcatgggcaaaaactggaagca
ttccctttgaaaactggcacaagacaaggatgtcctctctcaccactcctattcagcaca
gtattggaagttctggccagggcaatcaggcaagagaaagaaataaagggtattcaatta
ggaaaagagggagtcaaattgtctctgtttgcagatgacatgattgtatatttagaaaac
cccatcgtctcagcccagaatctccttaagctgataagcaacttcagcaaagtctcagga
tacaaaatcaatgtgcaaaaatcacaagcatttctgcaaaaatcacaagcatttctatac
accaagaacagacaaacggagagccaaatcatgagtgaactcccattcacaattactaca
aacagaataaaatacctaggaatccaacttacaagggatatgaaggacctcttcaaggag
aactacaaaccactgctcaaggaaataagagaggacacaaacaaatggaagaacattcca
tgcccatggacaggaagaatcaatatcgtgaaaatggccatactggccaaggtagtttat
agattcaatgctatccccaaaaagctaccactggctttcttcacagaattggaaaaaact
actttaaagttcacatggaaccaaaaaagagcccgcatagccaagacaatcctaagcaaa
aagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagta
atcaaaatagcatggtactggtaccaaaacagatatatagaccaatggaacagaacagag
gcctcagaaatgacagcacacatctacaaccatctgatctttgacaaacctgacaaaaac
aaggaatggggaaagaattccctatttaataaacggtgctgggaaaactggttagccaca
tgtagaaagctgaaactggatcccttcctttcaccttacacaaaaattaactcaagatgg
attaaagacttaaatgtaagacctaaaaccataaaaaccctaaaagaaaacctaggcaat
accattcaggacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatggca
acaaaagccaaaatagacaaatga

>gi568815593f:134271596_134490350|GENSCAN_predicted_peptide_3|161_aa
MWINLEDVMIIHRDIKPENILVSQSGITKLCDFGFARTLAAPGDIYTDYVATRWYRAPEL
VLKDTSYGKLGLRRGTPLKEHNSSPAREQNWMENEFDKLTEVGFRRAVITNFSELKEHVV
THCQEAKNLEKRLDEWLTRITSIEKSLNDLMELKTTVRKTS

>gi568815593f:134271596_134490350|GENSCAN_predicted_CDS_3|486_bp
atgtggataaacctggaggacgttatgatcattcatcgagatataaaacctgagaatatt
ttagtatcccagtcaggaattactaagctctgtgattttggttttgcacgaacactagca
gctcctggggacatttatacggactatgtggccacacgctggtatagagctcccgaatta
gtattaaaagatacttcttatggaaagttggggctaagaagagggacacctttaaaggaa
cacaactcctcaccagcaagggaacaaaactggatggagaatgagtttgacaagttgaca
gaagtaggcttcagaagggcggtaataacaaacttctctgagctaaaggagcatgttgta
acccattgccaggaagctaaaaaccttgaaaaaaggttagacgaatggctaactagaata
accagtatagagaagagcttaaatgacctgatggagctgaaaaccacagtacgaaaaact
tcatga

>gi568815593f:134271596_134490350|GENSCAN_predicted_peptide_4|239_aa
MPDRRHAPRPAVDFIQTAAAASAHSVVPLVWLCVVPVEPPNTDTTLLLSPARNRPLATME
TPAELLRSRLVRKTGTWAGLTAGQLRSMSTPARRRLMRDFKRLQEDPPVGVSGAPSENNI
MQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQ
NRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSWNDS

>gi568815593f:134271596_134490350|GENSCAN_predicted_CDS_4|720_bp
atgccggaccggcgtcacgccccacgtcccgctgttgactttatccaaacagccgccgcc
gcctcagcccattctgtggtcccgctggtctggctctgcgtagttccagtggagccaccg
aacactgatactactttgttgctcagccccgcaaggaaccggccacttgccaccatggaa
acgccggcggagttgctgcgttctagactcgtgcgcaagaccggaacatgggcaggactg
accgcggggcagctgcggagcatgtcgaccccggcccggaggaggctcatgcgggatttc
aagcggttacaagaggacccacctgtgggtgtcagtggcgcaccatctgaaaacaacatc
atgcagtggaatgcagttatatttggaccagaagggacaccttttgaagatggtactttt
aaactagtaatagaattttctgaagaatatccaaataaaccaccaactgttaggttttta
tccaaaatgtttcatccaaatgtgtatgctgatggtagcatatgtttagatatccttcag
aatcgatggagtccaacatatgatgtatcttctatcttaacatcaattcagtctctgctg
gatgaaccgaatcctaacagtccagccaatagccaggcagcacagctttatcaggaaaac
aaacgagaatatgagaaaagagtttcggccattgttgaacaaagctggaatgattcataa

>gi568815593f:134271596_134490350|GENSCAN_predicted_peptide_5|178_aa
MVGGEAAAAVEELVSGVRQAADFAEQFRSYSESEKQWKARMEFILRHLPDYRDPPDGSGR
LDQLLSLSMVWANHLFLGCSYNKDLLDKVMEMADGIEVEDLPQFTTRSELMKKISLSNLP
PPSPGIALAGLQKVLCLYSKGDFPADVSGSFHLKPQPYGPCRNTPMTKDLCYTARLPV

>gi568815593f:134271596_134490350|GENSCAN_predicted_CDS_5|537_bp
atggtcggtggcgaggcggctgccgcagtggaggagctggtttcgggggtgcggcaggcg
gccgacttcgcggagcagttccgctcctactcagagagcgagaagcaatggaaggcccgc
atggaattcatcctgcgccacctgcccgactaccgcgacccgcccgacggcagtggccgc
ctggaccagctgctctccctctccatggtctgggccaaccatctcttcctaggctgcagt
tacaataaagaccttttagacaaggtgatggaaatggccgatgggattgaagtggaagac
ctgccacaatttactaccagaagtgaattaatgaaaaagattagtttatcaaacttgcca
cctccaagtcctggtattgccttggctggcttgcagaaggttctttgtctttattctaaa
ggcgactttccagctgatgtttcagggagtttccacctcaaaccacaaccttatggccca
tgcaggaatactcctatgaccaaagatctctgctacacagcaaggttaccagtttag

>gi568815593f:134271596_134490350|GENSCAN_predicted_peptide_6|68_aa
MLMPKKNWIAIYELLFKEGVMVAKKEVYMPKHPELADKNVPNLHVMKAMQSSKSRGYVKE
QFAWRHFY

>gi568815593f:134271596_134490350|GENSCAN_predicted_CDS_6|207_bp
atgttgatgcctaagaagaactggattgccatttatgaactcctttttaaggagggagtc
atggtggccaagaaggaggtctacatgcctaagcacccggagctggcagacaagaatgtg
cccaaccttcatgtcatgaaggccatgcagtcttccaagtcccggggctatgtgaaggaa
cagtttgcttggagacatttctactag

>gi568815593f:134271596_134490350|GENSCAN_predicted_peptide_7|279_aa
MPSQHEAFHLLLPIPYGFLWLWKPKPCSHLKHALSLSARFHLGNLSDSDVQAAGRRTVNR
GACDELRGAIAKSSRLLRVSQRASQLSQHCPSLTPSFHPMSWPIPTGHSTPGKTEQATCQ
APSAQSAIAMALLGVYRSPQLPYQDRDSGQGSPQASSILIDMALGFLASKILKEGACPGE
PGKEGRCIVLALTYGQGPASGSGSDEGLLLLTCQVRRFQGLTCEQARGFLDGDSSLQRAG
LGVGVGSILEEGQGAILVPKSFPQSGGQGELRAGNFAIT

>gi568815593f:134271596_134490350|GENSCAN_predicted_CDS_7|840_bp
atgcccagccagcatgaagcctttcatttgctgctacccattccgtatggctttctctgg
ctctggaaaccaaaaccctgcagccacctaaagcatgccctgagtctctcagccaggttt
catctgggaaatctgagtgacagtgacgtgcaggcagctggaagacgcacagtaaaccga
ggagcctgtgatgagctcagaggagccattgccaagagcagcagactcctgagggtgagt
caacgggcaagccagctgagccagcactgtccctcccttacgccatccttccaccccatg
tcctggcccatccccactggccattccactccggggaaaacagagcaagccacttgccag
gccccttctgcccagagtgccattgccatggctctcctgggggtgtaccgctccccgcaa
cttccgtatcaagatagggactctggccaggggtccccacaggccagcagcatccttata
gacatggccttggggttcctcgccagcaaaatcctcaaggagggggcttgccctggggag
ccaggcaaggagggcagatgcattgtcctggcactgacctatgggcaggggccagccagt
ggcagtggcagcgacgagggcctgctgttgctcacttgtcaagtccgcaggtttcagggg
ctaacttgtgagcaagccaggggctttctggatggagactcatccctccagagggcaggg
ctgggtgttggtgtgggcagtattctggaggagggtcagggggccatccttgtgcccaag
agtttccctcagagtggaggtcaaggggagcttagagctgggaactttgccatcacctaa