GENSCAN 1.0	Date run:  5-Nov-116	Time: 08:12:38

Sequence gi568815583f:78442176_78648869 : 206694 bp : 43.05% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -  10308  10167  142  2  1   96   84    73 0.733   8.06
 1.01 Init -  16408  16332   77  1  2   72   78    60 0.505   1.96
 1.00 Prom -  27918  27879   40                              -4.26

 2.00 Prom +  32955  32994   40                              -2.26
 2.01 Init +  34109  34184   76  1  1   78  110    22 0.988   4.65
 2.02 Intr +  36122  36222  101  0  2   94   76   104 0.991   9.63
 2.03 Intr +  41143  41259  117  0  0  110  100     6 0.960   4.66
 2.04 Intr +  42586  42745  160  0  1   11   94   106 0.998   3.06
 2.05 Intr +  43530  43665  136  1  1   80  106    52 0.960   5.83
 2.06 Intr +  51734  51881  148  2  1   82   93    46 0.827   4.74
 2.07 Intr +  65421  65496   76  2  1   63  105    52 0.548   3.49
 2.08 Intr +  70909  71250  342  2  0  123   82   243 0.967  22.60
 2.09 Intr +  72847  72932   86  2  2   44  110    69 0.692   4.24
 2.10 Intr +  85223  85388  166  1  1   15   82   163 0.843   7.93
 2.11 Term +  91035  91495  461  1  2  123   42   279 0.994  22.05
 2.12 PlyA +  92447  92452    6                               1.05

 3.00 Prom +  92952  92991   40                              -4.76
 3.01 Init +  97163  97235   73  1  1   85   66    65 0.787   5.23
 3.02 Intr +  98245  98364  120  2  0   57   93   136 0.906  11.47
 3.03 Intr + 100308 100470  163  1  1   83   80   107 0.974   8.43
 3.04 Intr + 102694 102782   89  1  2  100   53    33 0.990   0.61
 3.05 Intr + 103459 103589  131  2  2   67   68    89 0.996   5.21
 3.06 Intr + 104400 104523  124  2  1   71   86    57 0.995   3.96
 3.07 Term + 106615 106769  155  2  2   71   39   137 0.903   5.18
 3.08 PlyA + 106996 107001    6                               1.05

 4.00 Prom + 118989 119028   40                              -4.26
 4.01 Init + 123545 123650  106  1  1  102   99   200 0.965  20.88
 4.02 Intr + 138636 138787  152  1  2   47   66    83 0.038   1.88
 4.03 Intr + 146139 146248  110  2  2   50   97    47 0.864   0.88
 4.04 Intr + 147630 148461  832  0  1   63   58   424 0.301  28.30
 4.05 Term + 150917 151078  162  1  0  121   48    11 0.225  -1.66
 4.06 PlyA + 151925 151930    6                               1.05

 5.08 PlyA - 151972 151967    6                               1.05
 5.07 Term - 154557 154429  129  0  0  112   47    28 0.636  -0.72
 5.06 Intr - 160089 159078 1012  2  1  122   94  1392 0.996 133.90
 5.05 Intr - 166349 166164  186  1  0   74   39   110 0.018   3.50
 5.04 Intr - 174958 174849  110  1  2   53   80   110 0.678   5.78
 5.03 Intr - 176486 176442   45  2  0  122  108    58 0.999   9.81
 5.02 Intr - 176740 176601  140  2  2   38   89   179 0.809  13.18
 5.01 Init - 178619 178538   82  2  1   96  101   313 0.994  32.53
 5.00 Prom - 181165 181126   40                              -5.96

 6.08 PlyA - 181233 181228    6                               1.05
 6.07 Term - 183116 182958  159  2  0  137   55   240 0.998  23.54
 6.06 Intr - 185220 185119  102  0  0    3   30   146 0.594   0.67
 6.05 Intr - 187770 186792  979  2  1   52   84  1602 0.979 147.14
 6.04 Intr - 189010 188901  110  1  2   56   89   212 0.590  17.18
 6.03 Intr - 189157 189113   45  1  0  112  111    70 0.998  10.31
 6.02 Intr - 193412 193264  149  0  2   64   66   247 0.627  20.05
 6.01 Init - 198958 198904   55  1  1   90  101   124 0.900  13.35

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 202966 202879   88  1  1   85  109    79 0.848  10.56


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:78442176_78648869|GENSCAN_predicted_peptide_1|73_aa
MMTSWERWLMLVILALWEVRLEDHLREYNCSYGFNYHYIYTNNSKIFSVVQVCLLSSKTT
CPIQEVNMFTLIL

>gi568815583f:78442176_78648869|GENSCAN_predicted_CDS_1|219_bp
atgatgaccagctgggaacggtggctcatgcttgtaatcctagcactttgggaggtgagg
ctggaggatcatttgagggagtacaactgctcctatggcttcaattatcactacatctac
actaataattccaaaatattttctgtagtccaagtctgtcttctaagctccaaaaccaca
tgcccgattcaggaggtgaacatgtttactttaatactg

>gi568815583f:78442176_78648869|GENSCAN_predicted_peptide_2|622_aa
MCPEYGAILSFFPVDNVTLKHLEHTGFSKAKLESMETYLKAVKLFRNDQNSSGEPEYSQV
IQINLNSIVPSVSGPKRPQDRVAVTDMKSDFQACLNEKVGFKGFQIAAEKQKDIVSIHYE
GSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEAGLRVKPYIRTSLSPGSGMV
THYLSSSGVLPYLSKLGLTPREFNSYGARRGNDAVMTRGTFANIKLFNKFIGKPAPKTIH
FPSGQTRRCAAEAALPVCGKAGSTPGRRVAADIMSSGNYQQSEALSKPTFSEEQASALVE
SVFGLKVSKVRPLPSYDDQNFHVYVSKTKDGPTEYVLKISNTKASKNPDLIEVQNHIIMF
LKAAGFPTASVCHTKGDNTASLVSVGRPIAELPVSPQLLYEIGKLAAKLDKTLQLSSLHR
ENFIWNLKNVPLLEKYLYALGQNRNREIVEHVIHLFKEEVMTKLSHFRECINHGDLNDHN
ILIESSKSASGNAEYQVSGILDFGDMSYGYYVFEVAITIMYMMIESKSPIQVGGHVLAGF
ESITPLTAVEKGALFLLVCSRFCQSLVMAAYSCQLYPENKDYLMVTAKTGWKHLQQMFDM
GQKAVEEIWFETAKSYESGISM

>gi568815583f:78442176_78648869|GENSCAN_predicted_CDS_2|1869_bp
atgtgtccggaatatggtgctatcctcagctttttccctgttgacaatgtgacattaaaa
catttagaacatacaggttttagcaaagccaaactcgaatcaatggaaacataccttaaa
gctgtgaaattgtttcgaaatgaccagaattcttcaggagaacctgaatactcccaggtg
atccagattaatctgaattcaatagttccatctgttagtggtccaaaaagacctcaggat
agagttgctgtgacagatatgaaaagcgatttccaggcttgcttaaatgaaaaggttgga
tttaaaggcttccaaattgcagctgaaaaacaaaaggatattgtctccattcattatgaa
ggaagtgaatataagctgtctcatggatcagtggtcattgctgcagttatcagttgtacc
aataattgcaatccatctgtcatgcttgctgcaggtcttttggctaaaaaggctgttgaa
gctggtctgcgtgttaaaccttatataagaacaagtttatctccaggcagtgggatggtt
acacattacctcagttcaagtggagtattaccatatctaagtaagcttggccttacccct
cgtgaattcaactcttacggagctcgaagaggtaatgatgctgtaatgacaagaggcact
tttgcaaatatcaagctttttaataagtttattggaaaaccagctcctaaaacaattcat
tttccatcaggacagacgcgccggtgcgcggccgaggccgcactacctgtctgcgggaaa
gcgggatccaccccaggacgtcgggtcgctgccgacataatgtcaagtggaaactatcag
cagtcagaggctcttagcaaacccactttcagtgaggaacaagcctctgcgttagtggag
tcagtgtttgggttgaaagtttccaaggtccggccacttcctagctatgatgaccaaaac
tttcatgtctacgtttcaaaaaccaaagatggcccaactgaatatgtcctcaaaataagc
aacaccaaggctagcaaaaatccagacctgattgaagtgcagaatcacatcatcatgttt
ctgaaagccgctggatttccaacagcctctgtgtgtcacactaaaggagacaacacagct
tctctcgtgtctgtaggaagacccatcgctgagcttcccgtcagcccccagctattgtat
gaaattggaaaactagctgccaaattggataagacactgcagttaagtagtcttcatcgg
gagaacttcatctggaatctgaaaaatgttcctcttctggagaaatacctgtatgccctg
ggccagaatcgaaaccgagagattgttgagcatgtcattcatctgttcaaggaggaagta
atgaccaaattaagtcattttcgagaatgtatcaatcacggagatcttaatgaccataat
attttaatagagtccagcaagtcagcctctggaaatgctgaatatcaagtgtctgggatt
ttagactttggtgacatgagctatggctactatgtgtttgaagtggcaattaccatcatg
tacatgatgattgagagcaagagtcctatacaagtaggaggccatgtccttgcagggttt
gaaagcatcaccccactgacagctgtagagaagggtgctttgtttttacttgtatgcagt
cgtttttgtcagtcacttgtcatggctgcatactcttgccagctatacccagagaacaaa
gactatctcatggttactgcaaaaaccgggtggaaacacttacagcaaatgtttgacatg
ggtcagaaagctgtagaagaaatctggtttgaaactgccaaatcctatgaatctgggatc
tccatgtga

>gi568815583f:78442176_78648869|GENSCAN_predicted_peptide_3|284_aa
MDNEHRNKYDNFSKEDKMVRVYADAVLRMRGGHISSGYSVSGGGLFFRGVKGSVDISGLQ
GLPSGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEY
LLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYG
GWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLT
RENGKTVIRVLKQKEVEQLIKKHEEEEAKAEREKKEKEQKEKDK

>gi568815583f:78442176_78648869|GENSCAN_predicted_CDS_3|855_bp
atggataatgaacacagaaacaagtatgacaatttcagtaaagaagataaaatggtgcga
gtatatgctgacgcggttctgcgcatgcgcgggggccatattagcagcggttattcggtg
agcggtggtggtttattcttccgtggagttaagggctccgtggacatctcaggtcttcag
ggtcttccatctggtcgcttataccaagttgaatatgccatggaagctattggacatgca
ggcacctgtttgggaattttagcaaatgatggtgttttgcttgcagcagagagacgcaac
atccacaagcttcttgatgaagtctttttttctgaaaaaatttataaactcaatgagtat
ttattacagtatcaggagccaataccttgtgagcagttggttacagcgctgtgtgatatc
aaacaagcttatacacaatttggaggaaaacgtccctttggtgtttcattgctgtacatt
ggctgggataagcactatggctttcagctctatcagagtgaccctagtggaaattacggg
ggatggaaggccacatgcattggaaataatagcgctgcagctgtgtcaatgttgaaacaa
gactataaagaaggagaaatgaccttgaagtcagcacttgctttagctatcaaagtacta
aataagaccatggatgttagtaaactctctgctgaaaaagtggaaattgcaacactaaca
agagagaatggaaagacagtaatcagagttctcaaacaaaaagaagtggagcagttgatc
aaaaaacatgaggaagaagaagccaaagctgagcgtgagaagaaagaaaaagaacagaaa
gaaaaggataaatag

>gi568815583f:78442176_78648869|GENSCAN_predicted_peptide_4|453_aa
MAARGSGPRALRLLLLVQLVAGRCGLAGAAGGAQRGLSEPSSIAKHEDSLLKDLFQDYER
WVRPVEHLNDKIKIKFGLAISQLVDVEWIDVKLRWNPDDYGGIKVIRVPSDSVWTPDIVL
FDNADGRFEGTSTKTVIRYNGTVTWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDG
SQVDIILEDQDVDKRDFFDNGEWEIVSATGSKGNRTDSCCWYPYVTYSFVIKRLPLFYTL
FLIIPCIGLSFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGE
YLVFTMIFVTLSIMVTVFAINIHHRSSSTHNAMAPLVRKIFLHTLPKLLCMRSHVDRYFT
QKEETESGSGPKSSRNTLEAALDSIRYITRHIMKENDVREVVEDWKFIAQVLDRMFLWTF
LFVSIVGSLGLFVPVIYKWANILIPVHIGNANK

>gi568815583f:78442176_78648869|GENSCAN_predicted_CDS_4|1362_bp
atggcggcgcgggggtcagggccccgcgcgctccgcctgctgctcttggtccagctggtc
gcggggcgctgcggtctagcgggcgcggcgggcggcgcgcagagaggattatctgaacct
tcttctattgcaaaacatgaagatagtttgcttaaggatttatttcaagactacgaaaga
tgggttcgtcctgtggaacacctgaatgacaaaataaaaataaaatttggacttgcaata
tctcaattggtggatgtggaatggatagatgtaaaattaagatggaaccctgatgactat
ggtggaataaaagttatacgtgttccttcagactctgtctggacaccagacatcgttttg
tttgataatgcagatggacgttttgaagggaccagtacgaaaacagtcatcaggtacaat
ggcactgtcacctggactccaccggcaaactacaaaagttcctgtaccatagatgtcacg
tttttcccatttgaccttcagaactgttccatgaaatttggttcttggacttatgatgga
tcacaggttgatataattctagaggaccaagatgtagacaagagagatttttttgataat
ggagaatgggagattgtgagtgcaacagggagcaaaggaaacagaaccgacagctgttgc
tggtatccgtatgtcacttactcatttgtaatcaagcgcctgcctctcttttataccttg
ttccttataataccctgtattgggctctcatttttaactgtacttgtcttctatcttcct
tcaaatgaaggtgaaaagatttgtctctgcacttcagtacttgtgtctttgactgtcttc
cttctggttattgaagagatcataccatcatcttcaaaagtcatacctctaattggagag
tatctggtatttaccatgatttttgtgacactgtcaattatggtaaccgtcttcgctatc
aacattcatcatcgttcttcctcaacacataatgccatggcgcctttggtccgcaagata
tttcttcacacgcttcccaaactgctttgcatgagaagtcatgtagacaggtacttcact
cagaaagaggaaactgagagtggtagtggaccaaaatcttctagaaacacattggaagct
gcgctcgattctattcgctacattacaagacacatcatgaaggaaaatgatgtccgtgag
gttgttgaagattggaaattcatagcccaggttcttgatcggatgtttctgtggactttt
cttttcgtttcaattgttggatctcttgggctttttgttcctgttatttataaatgggca
aatatattaataccagttcatattggaaatgcaaataagtga

>gi568815583f:78442176_78648869|GENSCAN_predicted_peptide_5|567_aa
MGSGPLSLPLALSPPRLLLLLLLSLLPVARASEAEHRLFERLFEDYNEIIRPVANVSDPV
IIHFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPD
IVLYNKQDPQLQVCWSLLEVHSRPCLPGYQQRWLQNSGGCRTVDLGDPQMLLPDRSSGSF
VSEEYPAVAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFG
SWSYDKAKIDLVLIGSSMNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIR
RLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTS
LVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPSWVKTVFLNLLPRVMFMTR
PTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKEGYPCQDGMCGYCHHRRIKISNFSAN
LTRSSSSESVDAVLSLSALSPEIKEAIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRI
FLWVFTLVCILGTAGLFLQPLMAREDA

>gi568815583f:78442176_78648869|GENSCAN_predicted_CDS_5|1704_bp
atgggctctggcccgctctcgctgcccctggcgctgtcgccgccgcggctgctgctgctg
ctgctgctgtctctgctgccagtggccagggcctcagaggctgagcaccgtctatttgag
cggctgtttgaagattacaatgagatcatccggcctgtagccaacgtgtctgacccagtc
atcatccatttcgaggtgtccatgtctcagctggtgaaggtggatgaagtaaaccagatc
atggagaccaacctgtggctcaagcaaatctggaatgactacaagctgaaatggaacccc
tctgactatggtggggcagagttcatgcgtgtccctgcacagaagatctggaagccagac
attgtgctgtataacaaacaggaccctcagctgcaggtctgttggagtttgctagaggtc
cactccagaccctgtttgcctgggtatcagcagcggtggctgcagaacagcggtggctgt
agaacagtggatcttggtgacccacagatgctgctgcctgatcgttcctctggaagtttt
gtatcagaggagtacccggccgttgctgttggggatttccaggtggacgacaagaccaaa
gccttactcaagtacactggggaggtgacttggatacctccggccatctttaagagctcc
tgtaaaatcgacgtgacctacttcccgtttgattaccaaaactgtaccatgaagttcggt
tcctggtcctacgataaggcgaaaatcgatctggtcctgatcggctcttccatgaacctc
aaggactattgggagagcggcgagtgggccatcatcaaagccccaggctacaaacacgac
atcaagtacaactgctgcgaggagatctaccccgacatcacatactcgctgtacatccgg
cgcctgcccttgttctacaccatcaacctcatcatcccctgcctgctcatctccttcctc
actgtgctcgtcttctacctgccctccgactgcggtgagaaggtgaccctgtgcatttct
gtcctcctctccctgacggtgtttctcctggtgatcactgagaccatcccttccacctcg
ctggtcatccccctgattggagagtacctcctgttcaccatgatttttgtaaccttgtcc
atcgtcatcaccgtcttcgtgctcaacgtgcactacagaaccccgacgacacacacaatg
ccctcatgggtgaagactgtattcttgaacctgctccccagggtcatgttcatgaccagg
ccaacaagcaacgagggcaacgctcagaagccgaggcccctctacggtgccgagctctca
aatctgaattgcttcagccgcgcagagtccaaaggctgcaaggagggctacccctgccag
gacgggatgtgtggttactgccaccaccgcaggataaaaatctccaatttcagtgctaac
ctcacgagaagctctagttctgaatctgttgatgctgtgctgtccctctctgctttgtca
ccagaaatcaaagaagccatccaaagtgtcaagtatattgctgaaaatatgaaagcacaa
aatgaagccaaagagattcaagatgattggaagtatgttgccatggtgattgatcgtatt
tttctgtgggttttcaccctggtgtgcattctagggacagcaggattgtttctgcaaccc
ctgatggccagggaagatgcataa

>gi568815583f:78442176_78648869|GENSCAN_predicted_peptide_6|532_aa
MRRAPSLVLFFLVALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQL
SLAQLISVNEREQIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLPDIVLYNN
ADGTYEVSVYTNLIVRSNGSVLWLPPAIYKSACKIEVKYFPFDQQNCTLKFRSWTYDHTE
IDMVLMTPTASMDDFTPSGEWDIVALPGRRTVNPQDPSYVDVTYDFIIKRKPLFYTINLI
IPCVLTTLLAILVFYLPSDCGEKMTLCISVLLALTFFLLLISKIVPPTSLDVPLIGKYLM
FTMVLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKRPGPDSSPARAF
PPSKSCVTKPEATATSTSPSNFYGNSMYFVNPASAASKSPAGSTPVAIPRDFWLRSSGRF
RQDVQEALEGVSFIAQHMKNDDEDQSFLDQQHRHRLRAYRKCRVSGPNPDLLAPNLHFNQ
VVEDWKYVAMVVDRLFLWVFMFVCVLGTVGLFLPPLFQTHAASEGPYAAQRD

>gi568815583f:78442176_78648869|GENSCAN_predicted_CDS_6|1599_bp
atgaggcgcgcgccttccctggtccttttcttcctggtcgccctttgcgggcgcgggaac
tgccgcgtggccaatgcggaggaaaagctgatggacgaccttctgaacaaaacccgttac
aataacctgatccgcccagccaccagctcctcacagctcatctccatcaagctgcagctc
tccctggcccagcttatcagcgtgaatgagcgagagcagatcatgaccaccaatgtctgg
ctgaaacaggaatggactgattaccgcctgacctggaacagctcccgctacgagggtgtg
aacatcctgaggatccctgcaaagcgcatctggttgcctgacatcgtgctttacaacaac
gccgacgggacctatgaggtgtctgtctacaccaacttgatagtccggtccaacggcagc
gtcctgtggctgccccctgccatctacaagagcgcctgcaagattgaggtgaagtacttt
cccttcgaccagcagaactgcaccctcaagttccgctcctggacctatgaccacacggag
atagacatggtcctcatgacgcccacagccagcatggatgactttactcccagtggtgag
tgggacatagtggccctcccagggagaaggacagtgaacccacaagaccccagctacgtg
gacgtgacttacgacttcatcatcaagcgcaagcctctgttctacaccatcaacctcatc
atcccctgcgtgctcaccaccttgctggccatcctcgtcttctacctgccatccgactgc
ggcgagaagatgacactgtgcatctcagtgctgctggcactgacattcttcctgctgctc
atctccaagatcgtgccacccacctccctcgatgtgcctctcatcggcaagtacctcatg
ttcaccatggtgctggtcaccttctccatcgtcaccagcgtctgtgtgctcaatgtgcac
caccgctcgcccagcacccacaccatggcaccctgggtcaagcgctgcttcctgcacaag
ctgcctaccttcctcttcatgaagcgccctggccccgacagcagcccggccagagccttc
ccgcccagcaagtcatgcgtgaccaagcccgaggccaccgccacctccaccagcccctcc
aacttctatgggaactccatgtactttgtgaaccccgcctctgcagcttccaagtctcca
gccggctctaccccggtggctatccccagggatttctggctgcggtcctctgggaggttc
cgacaggatgtgcaggaggcattagaaggtgtcagcttcatcgcccagcacatgaagaat
gacgatgaagaccagagtttcttggaccagcagcaccggcatcgcctgcgagcttatcgg
aaatgcagagtctcaggccccaatccagacctgctagctccaaacctgcattttaaccag
gtcgttgaggactggaagtacgtggctatggtggtggaccggctgttcctgtgggtgttc
atgtttgtgtgcgtcctgggcactgtggggctcttcctaccgcccctcttccagacccat
gcagcttctgaggggccctacgctgcccagcgtgactga