GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:22:21

Sequence gi568815593r:87294449_87512794 : 218346 bp : 35.87% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  11070  11109   40                              -2.05
 1.01 Init +  20952  20997   46  2  1   99  102     0 0.015   3.43
 1.02 Intr +  24764  24865  102  0  0   58   37    98 0.007   0.93
 1.03 Intr +  25038  25167  130  1  1  108  -30    84 0.001  -2.57
 1.04 Intr +  36900  37052  153  0  0  124   97    90 0.907  11.77
 1.05 Intr +  43526  43643  118  2  1   64  103   126 0.968  11.25
 1.06 Intr +  54738  54916  179  2  2   40   99   104 0.765   4.50
 1.07 Intr +  58709  58787   79  2  1   46   82    79 0.150   1.73
 1.08 Intr +  68103  68223  121  2  1   52  110   136 0.935  11.35
 1.09 Intr +  68900  69056  157  0  1   35  110    97 0.883   4.75
 1.10 Intr +  75365  75452   88  2  1   79   94    39 0.987   2.65
 1.11 Intr +  77670  77747   78  2  0  109   72   100 0.998   9.33
 1.12 Intr +  79715  79872  158  1  2  100   80    83 0.934   6.59
 1.13 Intr +  80392  80468   77  1  2   95   84    70 0.994   5.54
 1.14 Intr +  81945  82117  173  1  2   70   52   141 0.966   7.44
 1.15 Intr +  90801  90941  141  2  0    9   93   133 0.544   5.53
 1.16 Intr +  92378  92455   78  1  0   58   63    73 0.600   0.63
 1.17 Intr +  94945  95079  135  0  0   41   96   192 0.989  15.14
 1.18 Intr +  96352  96431   80  0  2   90   69    65 0.651   2.23
 1.19 Term +  97532  97586   55  2  1  117   33    35 0.547  -3.05
 1.20 PlyA +  98360  98365    6                               1.05

 2.14 PlyA -  98607  98602    6                               1.05
 2.13 Term - 103812 103617  196  2  1   51   42   111 0.442  -1.30
 2.12 Intr - 105057 104946  112  1  1   88  113    95 0.904  10.52
 2.11 Intr - 107324 107254   71  1  2   61  106    10 0.922  -1.99
 2.10 Intr - 110559 110396  164  0  2   69   62    85 0.961   1.85
 2.09 Intr - 111370 111308   63  1  0   55  105    63 0.819   2.70
 2.08 Intr - 112709 112425  285  2  0  -15   68   305 0.938  14.81
 2.07 Intr - 113738 113528  211  1  1  124   92   184 0.999  20.39
 2.06 Intr - 114915 114842   74  0  2   97   82     0 0.904  -2.41
 2.05 Intr - 116898 116776  123  0  0   44  103    96 0.984   6.56
 2.04 Intr - 118088 117987  102  2  0   -9   89   124 0.784   2.25
 2.03 Intr - 118374 118230  145  2  1  107  100   237 0.974  26.16
 2.02 Intr - 151238 150922  317  2  2   46   44   343 0.005  19.64
 2.01 Init - 166012 165806  207  1  0   68   80   118 0.460   7.87
 2.00 Prom - 171317 171278   40                              -3.65

 3.00 Prom + 179379 179418   40                              -8.25
 3.01 Sngl + 179621 180187  567  1  0   51   43   206 0.477   8.30
 3.02 PlyA + 180415 180420    6                               1.05

 4.00 Prom + 183777 183816   40                              -3.65
 4.01 Init + 187209 187403  195  2  0   50   15   172 0.092   5.08
 4.02 Intr + 189921 189943   23  2  2   72   82    16 0.085  -5.18
 4.03 Term + 193832 194048  217  2  1  105   46   150 0.133   8.13
 4.04 PlyA + 195692 195697    6                               1.05

 5.03 PlyA - 195786 195781    6                               1.05
 5.02 Term - 205446 205077  370  2  1   27   48   318 0.577  14.83
 5.01 Init - 205497 205490    8  0  2   75   72     0 0.488  -2.35
 5.00 Prom - 210350 210311   40                              -3.55

 6.00 Prom + 213277 213316   40                              -6.25
 6.01 Init + 216543 216689  147  2  0   72   12   147 0.750   5.64
 6.02 Term + 217106 217840  735  1  0   38   55   299 0.741  14.07
 6.03 PlyA + 218259 218264    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  17350  17235  116  1  2   47  109   142 0.971  11.93
S.002 Term - 147369 147257  113  1  2   57   39    98 0.951  -0.46


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:87294449_87512794|GENSCAN_predicted_peptide_1|715_aa
MGACPTLMTLSNPHKGTQCKLSVDLPLWGLEDDGPLPTAPLGSALVETLYPTPCGIHQGL
WLAPSEAMARVVHWPLLATATAGAGVAGMRGTKWYHGKLDRTIAEERLRQAGKSGSYLIR
ESDRRPGSFVLSFLSQMNVVNHFSFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLV
EEVGKTNSLILTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRY
YNSIGDIIDHYRKEQIVEGYYLKEPVPMQDQEQVLNDTVDGKEIYNTIRRKTKDAFYKNI
VKKGYLLKKGKGKRWKNLYFILEGSDAQLIYFESEKRATKPKGLIDLSVCSVYVVHDSLF
GRPNCFQIVVQHFSEEHYIFYFAGETPEQAEDWMKGLQAFCNLRKSSPGTSNKRLRQVSS
LVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFE
ITLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFLLSSHIPLKGIEPGSLRVRARYSME
KIMPEEEYSEFKELEVLLDLVSLAVPNSVTDSPSPIAARTLILVAKSVQNLANLVEFGAK
EPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRDLAALHEICVAHSDEL
RTLSNERGAQQHVLKKLLAITELLQQKQNQYTKTNDVRGSLNLSIRARPREKLKL

>gi568815593r:87294449_87512794|GENSCAN_predicted_CDS_1|2148_bp
atgggggcctgccccaccctgatgaccctatctaatcctcacaaaggcacacagtgcaag
ctgtcagtggatctacccttgtggggtctggaggatgatggccctcttcccacagctcca
ttaggcagtgccctagtggagactctctacccaacaccatgtggaatccaccaaggcttg
tggcttgcaccctctgaagccatggcccgagttgtacattggccccttttagccacagcc
acagctggagctggagtggctgggatgcggggcaccaagtggtatcacggaaaacttgac
agaacgatagcagaagaacgcctcaggcaggcagggaagtctggcagttatcttataaga
gagagtgatcggaggccagggtcctttgtactttcatttcttagccagatgaatgttgtc
aaccattttagtttcttaaaaggagatatgttcattgttcataatgaattagaagatgga
tggatgtgggttacaaatttaagaacagatgaacaaggccttattgttgaagacctagta
gaagaggtgggaaaaactaacagcttaattcttacagttggtcaagtctgcagttttctt
gtgaggccctcagataatactcctggcgattattcactttatttccggaccaatgaaaat
attcagcgatttaaaatatgtccaacgccaaacaatcagtttatgatgggaggccggtat
tataacagcattggggacatcatagatcactatcgaaaagaacagattgttgaaggatat
tatcttaaggaacctgtaccaatgcaggatcaagaacaagtactcaatgacacagtggat
ggcaaggaaatctataataccatccgtcgtaaaacaaaggatgccttttataaaaacatt
gttaagaaaggttatcttctgaaaaagggcaaaggaaaacgttggaaaaatttatatttt
atcttagagggtagtgatgcccaacttatttattttgaaagcgaaaaacgagctaccaaa
ccaaaaggattaatagatctcagtgtatgttctgtctatgtcgttcatgatagtctcttt
ggcaggccaaactgttttcagatagtagttcagcactttagtgaagaacattacatcttt
tactttgcaggagaaactccagaacaagcagaggattggatgaaaggtctgcaggcattt
tgcaatttacggaaaagtagtccagggacatccaataaacgccttcgtcaggtcagcagc
cttgttttacatattgaagaagcccataaactcccagtaaaacattttactaatccatat
tgtaacatctacctgaatagtgtccaagtagcaaaaactcatgcaagggaagggcaaaac
ccagtatggtcagaagagtttgtctttgatgatcttcctcctgacatcaatagatttgaa
ataactcttagtaataaaacaaagaaaagcaaagatcctgatatcttatttatgcgctgc
cagttgagccgattacagaaagggcatgccacagatgaatggtttctgctcagctcccat
ataccattaaaaggtattgaaccagggtccctgcgtgttcgagcacgatactctatggaa
aaaatcatgccagaagaagagtacagtgaatttaaagagctggaagtgctgttggacttg
gtgtcattagctgtgcccaattctgttacagattctccatctcctattgctgcaagaaca
ctgatattagtggctaaatctgtgcagaacttagcaaatcttgtggaatttggagctaag
gagccctacatggaaggtgtcaatccattcatcaaaagcaacaaacatcgtatgatcatg
tttttagatgaacttgggaatgtacctgaacttccggacactacagagcattctagaacg
gacctgtcccgtgatttagcagcattgcatgagatttgcgtggctcattcagatgaactt
cgaacgctcagtaatgagcgtggtgcacagcagcacgtattgaaaaagcttctggctata
acagaactgcttcaacaaaaacaaaaccagtatacaaaaaccaatgatgtcaggggcagt
ttaaaccttagcatcagagcaaggcccagggagaagctgaagctttag

>gi568815593r:87294449_87512794|GENSCAN_predicted_peptide_2|689_aa
MNRQLSKEDIQMANKHMKNVNITNDHGNAHQNHNVIPPYSYNNGHYKKKKIDVGVDALNR
EHFYTAGGKERSSSPATEQSWTENDFDEFREGFRRSNYSELQEEIQTKSKEVENFEKNLD
ECKTRITNTEKCLKELMELKAKARELREECRSLRSRCDQLEDRVSVMEDEMNEMKPSGPG
HDSIMYHNSSQKRHWTFSSEEQLARLRADANRKFRCKAVANGKRAPCQVPWVQRRTTPSP
SSNGRQVTSLCNVVKKRVLPNDPVFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGT
ACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQ
ILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKSRNRREKNIPIRDFPGKKLKFKKPFRA
EEPEQSLAMQGEEITDSCCQSGRQSLDCGDNVTDFEYSKEKLVKGLNLESGMIRFAALKD
HVGNLMDQKFVGSILGQGIQERNEDQRTLTRYPILENPEILRKTADDFLNRIALTDAYLL
YTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYEPPR
SEEVAVLKQKLERCHSAELALNVITCSWGISTDLGSVQNMRLFYYSYRYNDKACFSIELE
IGGFHSLLGFSGNRNFSEWLQRSNVDFNE

>gi568815593r:87294449_87512794|GENSCAN_predicted_CDS_2|2070_bp
atgaatagacaactctcaaaagaagatatacaaatggccaacaaacatatgaaaaatgtc
aatatcactaatgatcatggaaatgcacatcaaaaccacaatgtgataccaccttactcc
tacaacaatggccattacaaaaaaaaaaaaatagatgttggtgtggatgcactgaatagg
gaacacttctatactgctggtgggaaagaacgcagttcctcaccagcaacggaacaaagc
tggacggagaatgactttgacgagttcagagaaggcttcagacgatcaaactactccgag
ctacaggaggaaattcaaaccaaaagcaaagaagttgaaaactttgaaaaaaatttagac
gaatgtaaaactagaataaccaatacagagaagtgcttaaaggagctgatggagctgaaa
gccaaggctcgagaactacgtgaagaatgcagaagcctcaggagccgatgcgatcaactg
gaagacagggtatcagtgatggaagatgaaatgaatgaaatgaaaccctctggacctggt
cacgattccataatgtaccacaacagtagtcagaagcggcactggaccttctccagcgag
gagcagctggcaagactgcgggctgacgccaaccgcaaattcagatgcaaagccgtggcc
aacgggaagcgagcaccttgccaggttccgtgggtacaaagacgaacaacgccatccccg
tcgtcgaatggcagacaagtaaccagtctttgtaacgtagtgaagaagagagttcttccg
aatgatccagtctttcttgagcctcatgaagaaatgacactctgcaaatactatgagaaa
aggttattggaattctgttcggtgtttaagccagcaatgccaagatctgttgtgggtacg
gcttgtatgtatttcaaacgtttttatcttaataactcagtaatggaatatcaccccagg
ataataatgctcacttgtgcatttttggcctgcaaagtagatgaattcaatgtatctagt
cctcagtttgttggaaacctccgggagagtcctcttggacaggagaaggcacttgaacag
atactggaatatgaactacttcttatacagcaacttaatttccaccttattgtccacaat
ccttacagaccatttgagggcttcctcatcgacttaaagagtaggaataggagagagaag
aacattccaatcagagacttccctggtaaaaagctcaaattcaagaaaccattccgtgct
gaagagcctgaacagagcctagcaatgcagggggaagagatcacagacagctgctgccag
agtggaaggcagagtctagactgtggagacaatgttacagattttgaatacagcaaagag
aagctagtgaaaggtttaaatttagagagtggcatgattagatttgcagctttaaaagat
catgttggcaaccttatggatcagaaatttgttggcagcatattggggcagggaattcag
gagagaaatgaggaccagaggacactgacccgctatcccatattggagaatccagagatt
ttgaggaaaacagctgatgactttcttaatagaattgcattgacggatgcttacctttta
tacacaccttcccaaattgccctgactgccattttatctagtgcctccagggctggaatt
actatggaaagttatttatcagagagtctgatgctgaaagagaacagaacttgcctgtca
cagttactagatataatgaaaagcatgagaaacttagtaaagaagtatgaaccacccaga
tctgaagaagttgctgttctgaaacagaagttggagcgatgtcattctgctgagcttgca
cttaacgtaatcacttgtagttggggaatatctacggacttaggaagtgtgcagaatatg
aggttgttttattatagttataggtataacgacaaagcatgttttagcatagaacttgaa
attggtggatttcattcactcctcggtttcagtggtaacaggaatttttcagagtggtta
cagagaagtaatgttgactttaatgaataa

>gi568815593r:87294449_87512794|GENSCAN_predicted_peptide_3|188_aa
MGICEKTKHIIGVPESDRENGTKMENTLQDIIQGNFPNLARQANIRIQEIHRTSLRYSLR
SKTPTHTIVRFSKVETKEEMLRTASEKGQVTYKGKPISLTVDLTAETLQDRREWGPIFNI
LKEKNFQPRISYPAKLSFISEGEIKSFPDKQMLRNFVTTRPDLQEFLKAALNMERKNQHQ
PLQKHTKL

>gi568815593r:87294449_87512794|GENSCAN_predicted_CDS_3|567_bp
atgggaatatgtgaaaagaccaaacatataattggtgtacctgaaagtgacagggagaat
ggaaccaagatggaaaacacacttcaggatattatccaggggaacttccccaacctagca
agacaggccaacattcgaattcaagaaatacacagaacatcactaagatactccttgaga
agtaaaaccccaacacacacaattgtcagattctccaaggttgaaacaaaggaagaaatg
ttaaggacagccagtgagaaaggtcaggttacctacaaagggaagcccattagcctaaca
gtggatctcactgcagaaaccctacaagacagaagagagtgggggccaatattcaacatt
cttaaagaaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagt
gaaggagaaataaaatcctttcctgataagcaaatgctgaggaattttgtcaccaccagg
cctgacttacaagagttcctgaaggcagcactaaatatggaaaggaaaaaccagcaccag
ccactgcaaaaacataccaaattgtaa

>gi568815593r:87294449_87512794|GENSCAN_predicted_peptide_4|144_aa
MELTPGEDAVNIVEMTTKDLEYCINLVDKAAAGFERTDSNVESSVVVKCYQTASHATEKS
FMKERPPPPNKPRTSLKERQQPQSGAYRSNFHLPGTEHLGEGVAVGTASANLNIPACWLR
REQLIPQHITRALLRDRLPPYVGP

>gi568815593r:87294449_87512794|GENSCAN_predicted_CDS_4|435_bp
atggaattgactcctggtgaagatgctgtgaacattgttgaaatgacaacaaaggattta
gaatattgtataaacttagttgataaagcagcagcagggtttgagaggactgactcaaat
gttgaaagttctgttgtggtaaaatgctatcaaacagcatcacatgctacagagaaatct
ttcatgaaagaaagacccccacctcccaacaagccccggacatctctgaaagaaaggcag
cagccccaatcaggggcttatagatcaaatttccatctccctgggacagagcacctgggg
gaaggggtggctgtgggcacagcttcagcaaacttaaacattcctgcctgctggctccga
agagagcagctgatcccccagcacatcactcgagctctgctaagggatagactgcctcct
tatgtgggtccctga

>gi568815593r:87294449_87512794|GENSCAN_predicted_peptide_5|125_aa
MNESKLLAGPTTRPGVTEQVWDPASCCRHQQKQTLGVNCAGAQVGVLATLKPHRACYSAL
LAPLSVDACVLTTQLGSCLLTWGNCPPPVRAQCQCDSLSEYLHLVGPELLSEYKKNEVRQ
TLEGQ

>gi568815593r:87294449_87512794|GENSCAN_predicted_CDS_5|378_bp
atgaacgagagcaagctccttgcggggcccacgaccagaccaggtgtgactgaacaagtg
tgggatccggccagctgctgcaggcaccagcagaagcaaactctgggtgtgaactgtgcc
ggtgcccaggtgggggtgcttgcaactctgaagccccacagggcgtgttacagtgctctc
ttagctccactgtctgtggatgcttgtgtgttaacaactcagttgggctcttgcctcctc
acgtggggcaactgccctccaccagtgagggcacagtgccagtgtgacagcctttctgag
tacctgcacttggtgggccccgagctgttgtcagaatacaagaagaatgaggtcaggcag
acacttgaaggacagtga

>gi568815593r:87294449_87512794|GENSCAN_predicted_peptide_6|293_aa
MGQVWGLVHFTLELFQTDDEEEQEYSKVTEEVTEHVYLPAKAKVAKEGEFLQFKTWWADE
ASIQAAQNAQAQPQINITADQLLGVGGWADLDAHLVMQDDAIEQLSGVCIRAWEKITSGG
EQYLSFSAIKQGPREPYVDFIARLQESLKKMIADLAAQDIMLQLLAFENANPDCQAALRP
IRGKAYLVDYIKACDGIGGNLHKATLLAQAMAGLRVDKGNTPFPGACFNCGKYGHTKKEC
RKNQGVRLPDRGKKKKTAEPEMCPKCKKKKKKIGLISVTLSLIKVGTRFRETP

>gi568815593r:87294449_87512794|GENSCAN_predicted_CDS_6|882_bp
atgggacaagtgtggggtctggttcatttcaccttggaactttttcagactgatgatgag
gaggaacaagagtatagcaaagtaacagaagaggttacagagcatgtttatttgccagct
aaagctaaagtggcaaaggagggagagttcttacaatttaaaacttggtgggcagatgaa
gcttccattcaggctgctcaaaatgcccaggcccaacctcaaattaatataactgcagac
cagcttttgggggttggtggctgggctgatttagatgcacatctggtcatgcaggatgat
gccatagaacagcttagtggagtgtgcattagagcttgggaaaaaatcacttcaggtggg
gaacaatacctttcctttagtgctataaaacagggaccaagagaaccatatgttgatttt
atagctcggttacaggagtctcttaaaaagatgattgcagatttggctgctcaggatata
atgttgcagttattagcttttgaaaatgctaatcctgattgccaggctgctctgcgacct
atcagagggaaagcatatttagttgattatatcaaggcctgtgatggtatcggaggtaat
ctgcataaagctactctgctagcacaggcaatggcaggactgagagtggataaaggaaat
actccatttcctggagcttgttttaactgtgggaagtatggtcatactaaaaaagaatgt
agaaaaaatcaaggagtcaggctgccagataggggaaaaaagaaaaaaactgctgagcct
gaaatgtgtccaaaatgtaaaaaaaaaaaaaaaaaaattgggctaatcagtgtcactcta
agtttgataaaggtgggaacccggtttcgggaaacaccatga