GENSCAN 1.0	Date run:  5-Nov-116	Time: 08:08:41

Sequence gi568815586r:56634147_56852298 : 218152 bp : 45.18% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.32 Intr -    985    799  187  0  1   86   94   118 0.014  11.89
 1.31 Intr -   4277   4181   97  0  1   94   50   111 0.052   6.97
 1.30 Intr -   5161   4960  202  1  1  110   94   221 0.967  23.76
 1.29 Intr -   6046   5834  213  1  0   50  109   206 0.999  17.81
 1.28 Intr -   8434   8312  123  1  0   97  110    95 0.999  13.38
 1.27 Intr -   8685   8527  159  0  0   63   94    77 0.983   5.98
 1.26 Intr -   9441   9257  185  1  2   93  121   225 0.999  25.81
 1.25 Intr -   9812   9691  122  1  2   77   76   112 0.974   9.04
 1.24 Intr -  10809  10635  175  1  1  108   98   138 0.999  15.80
 1.23 Intr -  11207  11025  183  0  0   62  106   177 0.988  16.66
 1.22 Intr -  11870  11691  180  0  0   47  119   128 0.483  11.64
 1.21 Intr -  30654  30630   25  0  1  106  106    35 0.870   4.70
 1.20 Intr -  32120  32058   63  2  0   47   95    94 0.550   4.91
 1.19 Intr -  36218  36129   90  2  0   43  107    72 0.556   4.79
 1.18 Intr -  38663  38594   70  1  1   50  101   -13 0.505  -4.62
 1.17 Intr -  38919  38806  114  2  0  113  111   106 0.805  14.96
 1.16 Intr -  53441  53351   91  0  1   41   84    53 0.003  -0.75
 1.15 Intr -  54236  53852  385  2  1   34   82   122 0.001   0.62
 1.14 Intr -  78762  78640  123  0  0  116  115   141 0.995  20.38
 1.13 Intr -  79044  78916  129  0  0   69   59    95 0.980   5.59
 1.12 Intr -  79537  79391  147  1  0  110  113   126 0.995  17.73
 1.11 Intr -  80293  80216   78  1  0   76  116   108 0.999  12.15
 1.10 Intr -  80541  80456   86  1  2   51   94    79 0.992   4.34
 1.09 Intr -  82549  81725  825  2  0   87   30   222 0.127   7.69
 1.08 Intr -  90377  90306   72  0  0   97   96    49 0.844   5.98
 1.07 Intr - 100099 100001   99  2  0   61   83    91 0.972   5.98
 1.06 Intr - 104379 104288   92  2  2   70   94   125 0.995  10.94
 1.05 Intr - 105217 105148   70  2  1  104   95    59 0.999   6.44
 1.04 Intr - 107430 107289  142  0  1   87   79   101 0.998   9.03
 1.03 Intr - 112886 112797   90  2  0   45   48    94 0.209   1.29
 1.02 Intr - 117049 116892  158  2  2   83   52   130 0.937   8.63
 1.01 Init - 118152 118050  103  0  1   57   49   167 0.750  10.10
 1.00 Prom - 119745 119706   40                              -4.06

 2.00 Prom + 124361 124400   40                              -1.96
 2.01 Init + 139707 140019  313  2  1   51   64   383 0.995  29.69
 2.02 Intr + 147828 148086  259  1  1   83   78   175 0.991  12.52
 2.03 Intr + 150707 150870  164  2  2   74   79   118 0.967   9.12
 2.04 Intr + 160882 161046  165  2  0   43   44    93 0.371   0.33
 2.05 Term + 161608 162161  554  2  2   56   49   229 0.696  10.28
 2.06 PlyA + 163299 163304    6                               1.05

 3.07 PlyA - 163637 163632    6                               1.05
 3.06 Term - 165550 165482   69  1  0   81   48    65 0.149  -0.26
 3.05 Intr - 169905 169800  106  2  1   59   92    39 0.233   1.62
 3.04 Intr - 170894 170787  108  1  0   90   89    19 0.262   1.60
 3.03 Intr - 173935 173800  136  2  1   28   76    75 0.243  -0.07
 3.02 Intr - 175289 175119  171  0  0   67   45    74 0.164   0.91
 3.01 Init - 176736 176367  370  0  1   33   26   180 0.084   3.46
 3.00 Prom - 177507 177468   40                              -1.26

 4.00 Prom + 195430 195469   40                              -2.06
 4.01 Sngl + 210747 211445  699  2  0   75   34   168 0.660   6.32
 4.02 PlyA + 213129 213134    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +    588    780  193  2  1   96   90    65 0.971   6.63
S.002 Term -   4277   4177  101  0  2   94   55   117 0.946   7.29


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:56634147_56852298|GENSCAN_predicted_peptide_1|1626_aa
METFDPTELPELLKLYYRRLFPYSQYYRWLNYGGVIKNYFQHREFSFTLKDDIYIRYQSF
NNQSDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGAFQAQEKELVFDIDMTDYDDNNI
KNDKYGPWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFD
PFTVPTISFICRELDAISTNEEEKEENEAESDVKHRTRDYKKTSLAPYVKVFEHFLENLD
KSRKGELLKKSEMPGEATETVPATEQELPQPQAETEAPTPPAVTPPSPEKGPATPAPKGT
PTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPII
TAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASH
SPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQF
LPSSPGLVLESPSKPLAPADEDELLPLIPPEPISGGVPFQSVLVNMPTPKSAGIPVPTPS
AKQPVTKNNKGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSE
KKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQ
QAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRA
KAVRALKNNSNDIVNAIMISLESRAGAQKQGLRTRGGKARAFCCVTSRRPASPPLVCTHA
RSFSVLAPLFLHFPLLPDRRSRSFRAVHSGARGRARRCRRRLREARRGRDRREKAESPPE
RSRLPSSSRRQRGPPTSSPVPLPRSQCPESSAPVVGAARCLAELLGEPHADLAVSCRQPA
SAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNLN
WLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGGDEDVDLPEVDGADDDSQDSDDEREQ
AAAVAAAFSLHPDYAMLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRD
YAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGE
STVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAP
IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAK
AHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALT
GLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQER
ITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTS
RIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLS
QPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAE
EHSSGSFATALLSGCPHLGSSCPFKHHLLPSAAAGPGLGEEAQPPPGSATCASAAAAAAC
GPALLQ

>gi568815586r:56634147_56852298|GENSCAN_predicted_CDS_1|4878_bp
atggagacgtttgaccccaccgagctgcccgagctgcttaaactttattaccggaggctc
tttccctactctcagtactatcgctggctcaactacggtggagtgataaagaattacttt
caacaccgtgaattttcattcacattgaaagatgatatttacattcgctaccaatccttc
aacaaccagagtgatctggaaaaggagatgcagaaaatgaatccatacaagattgatata
ggcgcagtatattctcacagacccaatcaacacaatacagtgaagctgggagctttccag
gctcaggaaaaagaactggtatttgacattgacatgacagactatgacgataataacatc
aaaaatgacaaatatggaccctggctggagtgggagattatgctccagtactgttttcca
cggctggatatcaatgtcagcaaaggaatcaatcatctactgaagagcccttttagtgtt
catcctaaaacaggtcgcatatctgtgcctattgatttgcagaaagtggaccagtttgat
ccatttactgttccgaccataagcttcatctgccgtgaattggatgccatttccactaat
gaagaggaaaaagaggagaatgaagctgaatctgatgtcaaacatagaaccagagattat
aagaagaccagtctagcaccttatgtgaaagtttttgaacattttcttgaaaatctggat
aaatcccgaaaaggagaacttcttaagaagagtgaaatgcccggcgaagccacagaaacc
gtccctgctacagagcaggagttgccgcagccccaggctgagacagaggcacctactcct
ccagctgtgactcctccatcccccgaaaagggcccagcaactccagcccccaaagggact
cccacttccccacctgtgactccttcctccctcaaagactcccctacttccccagcttct
gtcacatgtaaaatgggggccactgttcctcaagcatctaaagggcttccagcaaagaaa
ggccccacagctctgaaagaagtacttgttgccccagctccagaaagcacgccaatcatc
acagctcccactcggaaaggtccacagaccaaaaagagttctgctacttcacctcctata
tgcccagatccctcagctaagaatggttctaaaggacccctttccacagtggctccagcc
cctctactccctgttcagaaagactcttcaaagacagcaaaaggcaaagatgcttctcat
tccccaaagggccccttggctcctcctgagtctaaggcgtccacccctctaacagcagct
gcctttgagaaggtccttcctaaacctgaatcagcatctgtctctgcagcaccctcccca
ccagtctctctgcctcttgctccctccccagttcccactctgcctcctaaacagcaattt
ctgccgtcctctcctgggctggtgttggaatcaccctctaaaccccttgcccctgctgat
gaggatgagctgctgcctctgattcccccggaaccaatctctgggggagtgcctttccag
tcggtcctcgtcaacatgcccacccctaaatctgctggaatccctgtcccaaccccctct
gccaagcaacctgttacgaagaacaacaaggggtctggaacagaatctgacagtgatgaa
tcagtaccagagcttgaagaacaggattccacccaggcaaccacacaacaagcccagctg
gcggcagcagctgaaattgatgaagaaccagtcagtaaagcaaaacagagtcggagtgaa
aagaaggcacggaaggctatgtccaaactgggtcttcggcaggttacaggagttactaga
gtcactatccggaaatctaagaatatcctctttgtcatcacaaaaccagatgtctacaag
agccctgcttcagatacttacatagtttttggggaagccaagatcgaagatttatcccag
caagcacaactagcagctgctgagaaattcaaagttcaaggtgaagctgtctcaaacatt
caagaaaacacacagactccaactgtacaagaggagagtgaagaggaagaggtcgatgaa
acaggtgtagaagttaaggacattgaattggtcatgtcacaagcaaatgtgtcgagagca
aaggcagtccgagccctgaagaacaacagtaatgatattgtaaatgcgattatgatatct
ctagaaagccgcgccggagcccaaaaacaaggactgcgcacgcgcggcggcaaggcccgg
gcattttgctgcgtcaccagccgccgcccggcctcaccacccctcgtttgcacgcacgca
cgttcattctccgtcctcgcgccccttttcctacactttcctcttctccccgaccggagg
agccgctctttccgcgcggtgcattctggggcccgaggtcgagcccgccgctgccgccgt
cgcctgagggaagcgagaagaggccgcgaccggagagaaaaagcggagtcgccaccggag
agaagtcgactccctagcagcagccgccgccagagaggcccgcccaccagttcgcccgtc
cccctgccccgttcacaatgccctgagtcgagtgcacctgtggtgggtgccgccaggtgc
ctggcggagctcctgggagagccccacgcggacctcgccgtgagctgcaggcagcctgct
tctgcaaagtggtacgatcgaagggactatgtcttcattgaattttgtgttgaagacagt
aaggatgttaatgtaaattttgaaaaatccaaacttacattcagttgtctcggaggaagt
gataattttaagcatttaaatgaaattgatctttttcactgtattgatccaaatcttaat
tggcttagtgtcgacttcaataattggaaagactgggaagatgattcagatgaagacatg
tctaattttgatcgtttctctgagatgatgaacaacatgggtggtgatgaggatgtagat
ttaccagaagtagatggagcagatgatgattcacaagacagtgatgatgaaagagagcag
gcggctgcggttgctgcagccttcagtctccacccggactacgccatgttggggtttgtg
ggtcgggtggccgctgctccggcctccggggccttgcggagactcaccccttcagcgtcg
ctgcccccagctcagctcttactgcgggccgctccgacggcggtccatcctgtcagggac
tatgcggcgcaaacatctccttcgccaaaagcaggcgccgccaccgggcgcatcgtggcg
gtcattggcgcagtggtggacgtccagtttgatgagggactaccaccaattctaaatgcc
ctggaagtgcaaggcagggagaccagactggttttggaggtggcccagcatttgggtgag
agcacagtaaggactattgctatggatggtacagaaggcttggttagaggccagaaagta
ctggattctggtgcaccaatcaaaattcctgttggtcctgagactttgggcagaatcatg
aatgtcattggagaacctattgatgaaagaggtcccatcaaaaccaaacaatttgctccc
attcatgctgaggctccagagttcatggaaatgagtgttgagcaggaaattctggtgact
ggtatcaaggttgtcgatctgctagctccctatgccaagggtggcaaaattgggcttttt
ggtggtgctggagttggcaagactgtactgatcatggagttaatcaacaatgtcgccaaa
gcccatggtggttactctgtgtttgctggtgttggtgagaggacccgtgaaggcaatgat
ttataccatgaaatgattgaatctggtgttatcaacttaaaagatgccacctctaaggta
gcgctggtatatggtcaaatgaatgaaccacctggtgctcgtgcccgggtagctctgact
gggctgactgtggctgaatacttcagagaccaagaaggtcaagatgtactgctatttatt
gataacatctttcgcttcacccaggctggttcagaggtgtctgcattattgggccgaatc
ccttctgctgtgggctatcagcctaccctggccactgacatgggtactatgcaggaaaga
attaccactaccaagaagggatctatcacctctgtacaggctatctatgtgcctgctgat
gacttgactgaccctgcccctgctactacgtttgcccatttggatgctaccactgtactg
tcgcgtgccattgctgagctgggcatctatccagctgtggatcctctagactccacctct
cgtatcatggatcccaacattgttggcagtgagcattacgatgttgcccgtggggtgcaa
aagatcctgcaggactacaaatccctccaggatatcattgccatcctgggtatggatgaa
ctttctgaggaagacaagttgaccgtgtcccgtgcacggaaaatacagcgtttcttgtct
cagccattccaggttgctgaggtcttcacaggtcatatggggaagctggtacccctgaag
gagaccatcaaaggattccagcagattttggcaggtgaatatgaccatctcccagaacag
gccttctatatggtgggacccattgaagaagctgtggcaaaagctgataagctggctgaa
gagcattcatctggatccttcgcgactgctctcctgagcggttgtcctcacctcggtagt
tcctgcccctttaagcaccacctcctcccctccgccgccgccggcccagggctgggggag
gaggcgcagccgccgcccggctcggccacctgcgcctctgccgccgccgccgccgcctgc
ggcccggccctgctccag

>gi568815586r:56634147_56852298|GENSCAN_predicted_peptide_2|484_aa
MWLYLAAFVGLYYLLHWYRERQVVSHLQDKYVFITGCDSGFGNLLARQLDARGLRVLAAC
LTEKGAEQLRGQTSDRLETVTLDVTKMESIAAATQWVKEHVGDRGLWGLVNNAGILTPIT
LCEWLNTEDSMNMLKVNLIGVIQVTLSMLPLVRRARGRIVNVSSILGRVAFFVGGYCVSK
YGVEAFSDILRREIQHFGVKISIVEPGYFRTGMTNMTQSLERMKQSWKEAPKHIKETYGQ
QYFDARVKPQTFTVSVTALKVARLELFVPPGGLVVLLGSGVKLQIFEVSVTAHKSSMDLK
NSGAQLASPSGSRTGAAGGAACQYCAVRSHSSALGWSMGLGAVEQGVALVGEAPAAQEPT
EGVGGSGMAGCRSQALSHGKAAKAWREIERSADGPALLGDPVHPPQPLARVLSPPLPGAS
RAAWLLRVRGPPSPRPPRTSAGLQVPHTAPVTARVSPSTPPCKLREWALALASPERGSHS
AVGD

>gi568815586r:56634147_56852298|GENSCAN_predicted_CDS_2|1455_bp
atgtggctctacctggcggccttcgtgggcctgtactaccttctgcactggtaccgggag
aggcaggtggtgagccacctccaagacaagtatgtctttatcacgggctgtgactcgggc
tttgggaacctgctggccagacagctggatgcacgaggcttgagagtgctggctgcgtgt
ctgacggagaagggggccgagcagctgaggggccagacgtctgacaggctggagacggtg
accctggatgttaccaagatggagagcatcgctgcagctactcagtgggtgaaggagcat
gtgggggacagaggactctggggactggtgaacaatgcaggcattcttacaccaattacc
ttatgtgagtggctgaacactgaggactctatgaatatgctcaaagtgaacctcattggt
gtgatccaggtgaccttgagcatgcttcctttggtgaggagagcacggggaagaattgtc
aatgtctccagcattctgggaagagttgctttctttgtaggaggctactgtgtctccaag
tatggagtggaagccttttcagatattctgaggcgtgagattcaacattttggggtgaaa
atcagcatagttgaacctggctacttcagaacgggaatgacaaacatgacacagtcctta
gagcgaatgaagcaaagttggaaagaagcccccaagcatattaaggagacctatggacag
cagtattttgatgcccgagtgaagccgcagaccttcacagtgagtgttacagctcttaag
gtagcgcgtctggagttgttcgttcctcccggtgggctcgtggtcttgctgggctcagga
gtgaagctgcagatcttcgaggtgagtgttacagctcataaaagcagtatggacctaaag
aactcaggagcccagctggcttcacctagtggatcccgcaccggggctgcaggtggagct
gcctgccagtactgcgccgtgcgctcgcattcctcagcccttgggtggtcgatgggactg
ggcgccgtggagcagggggtggcgctcgtcggggaggctccggccgcacaggagcccacg
gagggggtgggaggctcaggcatggcgggctgcaggtcccaagccctgtcccatgggaag
gcagccaaggcctggcgagaaatcgagcgcagcgccgatgggccggcactgctgggggac
ccagtacaccctccacagccactggcccgggtgctaagtcccccattgcccggggccagc
agggctgcctggctgctccgagtgcggggcccaccaagcccacgcccacccagaacttca
gctggcctgcaagtgccgcacacagccccggttaccgctcgtgtctctccctccacacct
ccctgcaagctgagggagtgggctctggccttggccagcccagaaaggggctcccacagt
gcagtgggggactga

>gi568815586r:56634147_56852298|GENSCAN_predicted_peptide_3|319_aa
MSFSYSQNKNPIMLAAVRRRDWGSMLHGASGIWGQAGAPPLLSWWGRSSLDAATATQIMA
ANLGLLLHGGGKSPGTPNAVDLSLPVLLGRPELGSSPDCLGTAATTHTTAADPDYPALLG
AQEVPGISKLPATTIFPGASHGSCLRCTWSSLSLAESQCPCQHLKLPGPLKQLACLTVHT
GRSQSQLPLQQMPGEYGPIKVQVPFSLQDLRQIKGDLGKFLDSSNRLGSACSCRLASPCC
RYPLRSKSKVMVKPELCHSPASASRRSCLQCAWSSCSLTESQSPCQHLELPGPLRQLAPV
YDVPFPVSMSSRRSTPTYE

>gi568815586r:56634147_56852298|GENSCAN_predicted_CDS_3|960_bp
atgtctttctcctactcccagaacaagaaccccatcatgctggctgcagtaaggaggcgc
gactggggctctatgcttcatggagccagcgggatctggggacaagcaggagctccgcca
cttctgagttggtggggcaggagctccctggatgcagccacagccacccaaatcatggct
gcaaacctgggcctcctgctgcatggaggaggcaaaagccctggcaccccgaatgctgtg
gacctgagcctccctgtgctcttagggaggccagaactaggcagcagccctgactgccta
ggcacagctgcaaccacccacactacagctgcagacccagactaccctgcactcttgggg
gcccaggaagttcctggcatctccaagcttccagccaccaccatattccctggcgccagc
catggaagctgcttgcggtgcacctggtccagccttagcctagcagagagccagtgccca
tgccagcacctgaagctgcctggcccactgaagcagctggcatgtctgactgtgcacact
ggcaggtcccagtcacaactgcccctacaacagatgcctggtgaatatggccccattaag
gtccaggttcccttttctctacaggacttaaggcaaattaagggggatcttggcaagttt
ttagacagctctaacaggcttggaagtgcctgctcctgccgcctggcttctccctgctgt
cggtacccactccgatctaagagcaaagtcatggtcaagcctgagctctgtcacagccca
gccagtgccagccgtagaagctgcttgcagtgtgcctggtctagctgcagcctcacagag
agccagagcccatgccagcacctggagctgcccggcccactgcggcagctggccccagtg
tatgatgttcccttccccgtgtccatgagctctcgtcgttcaactcccacttatgaataa

>gi568815586r:56634147_56852298|GENSCAN_predicted_peptide_4|232_aa
MAILPKIIYRFNAIPIKLPLTFFIELEKTTLNFIWNQKRACIAKTILSKKNKAGGIMLPD
FKLHYKATVTKTAWYWYQNREIDQWNRTEASEITPHIYNHLIFDKPDKNKQWGKDSLFNN
YCWENSLAICRKLKLDPFLTPYTKINSRWIKALNVRPKTIKTLEANVGNTIQDIGMGKDF
MAKTPKAVVTKAKIEKWDLIKLKNFCTAKETERTGNLQNGRKFLQSIHLTKG

>gi568815586r:56634147_56852298|GENSCAN_predicted_CDS_4|699_bp
atggccatactgcccaagataatttatagattcaatgctatccccatcaagctaccactg
actttcttcatagaattggaaaaaactactttaaatttcatatggaaccaaaaaagagcc
tgcatagccaagacaatcctaagcaaaaagaacaaagctggaggcatcatgctacctgac
ttcaaactacactacaaggctacagtaaccaaaacagcatggtattggtaccaaaacaga
gagatagaccaatggaacagaacagaggcctcagaaataacaccacacatctacaaccat
ctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattcgctatttaataat
tattgctgggaaaactcgctagccatatgtagaaagctgaaactggatcccttccttaca
ccttacacaaaaattaactcaaggtggattaaagccttaaatgtaagacctaaaaccata
aaaaccctagaagcaaacgtaggcaataccattcaggacataggcatgggcaaggacttc
atggctaaaacaccaaaagcagtggtaacaaaagccaaaatagaaaaatgggatctaatt
aaactaaagaacttctgcacagcaaaagaaacagagagaacaggcaacctacagaatggg
agaaaatttttgcaatctatccatctgacaaagggctaa