GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:27:02

Sequence gi568815592r:33473806_33677604 : 203799 bp : 50.49% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 PlyA -   3003   2998    6                               1.05
 1.08 Term -  17273  17067  207  2  0    4   54   127 0.227  -1.76
 1.07 Intr -  24915  24856   60  0  0   90   71    49 0.348   2.33
 1.06 Intr -  29002  28717  286  0  1   66   45   175 0.395   8.34
 1.05 Intr -  38702  38636   67  0  1  105   61     8 0.098  -2.24
 1.04 Intr -  45686  45560  127  2  1  121   92    10 0.031   4.95
 1.03 Intr -  59054  58870  185  0  2   58   35   100 0.031   1.21
 1.02 Intr -  59949  59863   87  1  0  106  101   -13 0.075   1.74
 1.01 Init -  65999  65930   70  2  1   52  110    48 0.361   4.62
 1.00 Prom -  70558  70519   40                              -3.56

 2.03 PlyA -  72988  72983    6                               1.05
 2.02 Term -  94021  94006   16  0  1  121   44     5 0.600  -2.89
 2.01 Init -  95570  95494   77  2  2   65  105    65 0.813   6.46
 2.00 Prom -  96134  96095   40                              -3.06

 3.11 PlyA -  96871  96866    6                               1.05
 3.10 Term - 100102  99998  105  1  0  141   41   135 0.905  12.51
 3.09 Intr - 100409 100229  181  1  1   68   92   228 0.999  21.07
 3.08 Intr - 101636 101493  144  1  0  115   80   302 0.991  31.50
 3.07 Intr - 102123 101988  136  1  1   71   99   102 0.990   9.23
 3.06 Intr - 110962 110902   61  1  1  120   94    24 0.001   4.51
 3.05 Intr - 112693 112559  135  1  0  132   68    58 0.002   8.96
 3.04 Intr - 113039 112959   81  2  0   66  102    12 0.001   0.23
 3.03 Intr - 114530 114379  152  0  2   57   59    72 0.001   1.08
 3.02 Intr - 119363 119259  105  0  0   89   76    63 0.127   5.39
 3.01 Init - 119797 119446  352  1  1   38   70   180 0.166   6.61
 3.00 Prom - 122320 122281   40                              -7.66

 4.00 Prom + 123388 123427   40                              -5.06
 4.01 Init + 147798 147886   89  2  2   93   84   175 0.941  17.71
 4.02 Intr + 166679 166749   71  2  2  122   83   167 0.997  18.43
 4.03 Intr + 181961 182082  122  0  2  102   91   237 0.994  25.61
 4.04 Intr + 184127 184213   87  1  0   97   94   163 0.999  17.97
 4.05 Intr + 184865 185023  159  1  0   61   64   304 0.991  25.48
 4.06 Intr + 185216 185314   99  1  0  106   78   212 0.994  22.31
 4.07 Intr + 185661 185744   84  2  0  104   74    96 0.983   9.82
 4.08 Intr + 188723 188869  147  1  0   85   55   241 0.775  20.93
 4.09 Intr + 189106 189201   96  0  0  106   83   142 0.994  15.71
 4.10 Intr + 189695 189745   51  1  0   80   77    33 0.582   0.50
 4.11 Intr + 189933 190075  143  2  2   36   80   205 0.978  13.65
 4.12 Intr + 191065 191164  100  1  1   77   74   257 0.923  23.31
 4.13 Intr + 191248 191408  161  0  2  100   80   453 0.999  44.49
 4.14 Intr + 192030 192171  142  0  1   80   96   322 0.999  32.56
 4.15 Intr + 193324 193485  162  0  0  107   85   326 0.999  34.37
 4.16 Intr + 193987 194159  173  0  2  120   80   466 0.999  47.74
 4.17 Intr + 194710 194829  120  1  0   84   46   203 0.999  15.31
 4.18 Intr + 195151 195351  201  1  0   63   49   340 0.561  26.00
 4.19 Intr + 196520 196771  252  2  0  114   27   522 0.999  45.25
 4.20 Intr + 196866 197010  145  0  1   67   24   319 0.995  23.68
 4.21 Intr + 197360 197501  142  1  1  132   65   320 0.984  34.03
 4.22 Intr + 198224 198423  200  0  2  129   51   280 0.998  27.47
 4.23 Intr + 199786 199915  130  0  1  127   74   213 0.999  24.07
 4.24 Intr + 200403 200460   58  1  1  121   60   100 0.999   8.44
 4.25 Intr + 201886 202051  166  1  1  101   66   361 0.980  35.16
 4.26 Intr + 202963 203127  165  0  0   84  107   337 0.998  35.36
 4.27 Intr + 203210 203284   75  1  0  132   69   139 0.995  16.11
 4.28 Intr + 203699 203788   90  1  0   82   40   123 0.987   7.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 112865 113004  140  0  2   93  101   159 0.872  17.88
S.002 Term + 149950 150061  112  1  1   87   41   121 0.955   5.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:33473806_33677604|GENSCAN_predicted_peptide_1|362_aa
MNGKGLKESLPAAQIDFARGITTGGTTGTCHCVRSWWVLGLTDLKNEAADPHDSGAQLAS
PSGSRTGAAGGAACQSCAVRSHSSALGWSMGLAALEQGVVLVREARAAQEPMEWRYEQNF
IFSNLNQSSCIGMDGLRERSWYQICRQLGTEVFTCMAHNTAGDGEGPTLGCSPGVTEDEA
SGAGRPLRVWGHTHLELALARDRLPRLSLHIFLQAEGAGSDLGQPREGLPQCGGGLKGSS
STVRVGVEAEQTPRASEGCQHDVTSHQHFGKPRQVHREAKGEEDEEDLYLVLEQDGNYKD
VKKALKGIVEWRENTTKALVETLLEKLRLQSTGWRKGLPHAQARASQQSAGKQETTPRVP
GE

>gi568815592r:33473806_33677604|GENSCAN_predicted_CDS_1|1089_bp
atgaatggaaaaggcttgaaggaaagcctgccagccgctcagattgactttgcaaggggg
atcaccacaggtgggactacaggcacatgccactgtgtccggagttggtgggttcttggt
ctgactgacttgaagaacgaagccgcggaccctcatgactcaggagcccagctggcttca
cccagtggatcccgcactggggctgcaggtggagctgcctgccagtcctgcgccgtgcgc
tcgcactcctcagcccttgggtggtcaatgggactggccgccctggagcagggggtggtg
ctcgtccgggaggctcgggcggcacaggagcccatggagtggcgttatgaacagaacttt
attttttccaacctaaaccaatcatcctgcattgggatggatggattgagggaaagatca
tggtaccagatctgcaggcagctggggacagaagtcttcacttgcatggcccataacact
gcgggggatggagaagggccgaccctcggatgctcacctggagtaacggaggatgaggcc
agtggcgctggccggccactccgagtgtggggccacacccacctggaactcgcgctggcc
cgtgatcgtctcccacgcctctccctccacatcttcctgcaagcagagggagccggctcc
gacctcggccagcccagagaggggctcccacagtgcggcggcgggctgaagggctcttca
agcacggtcagagtgggcgtcgaggccgagcagacaccaagagcgagcgagggctgccag
cacgatgtcacctctcaccagcactttgggaagccaaggcaggtacacagagaagcaaag
ggtgaagaagatgaagaggacctttatttagtgttagaacaggatggtaactataaagat
gtgaaaaaagctctaaagggtattgtggagtggagggagaatactaccaaggccctggtt
gagaccttattggagaagctgcggctgcagtccactggatggcggaaaggtctgccacat
gcccaggccagagctagtcagcaatcagcaggcaagcaggaaacaacccccagggtgcca
ggggaatga

>gi568815592r:33473806_33677604|GENSCAN_predicted_peptide_2|30_aa
MDVGRHQMDACESVNVRVAKCVCGICKAYS

>gi568815592r:33473806_33677604|GENSCAN_predicted_CDS_2|93_bp
atggacgtgggcaggcaccaaatggatgcatgtgagagtgtgaacgtgcgtgtggctaag
tgtgtatgtggcatctgtaaagcctattcctag

>gi568815592r:33473806_33677604|GENSCAN_predicted_peptide_3|483_aa
MVPSPGSLLDSSLLALLASFSALSKLYYSNIIIWFLTARVCYGPPTTDCEFLEARELPSA
QEAPRSAAGRPLRARPEGTEMWHGSAVLRCERLRRYARSAGAWGGLAVVAETCLLHFGLR
LFPDSRSQAAPLHPADDGDKVPHKPLIWGKGEEMTQASQRYSGNPRTVTPGTGQAGWGGD
EKKEEGPERADTKIQTLRCEKTKEGVGGLARAKRTWPSTMLTSTTVISGRDVEPARYHPS
FALPSPGSSLFEGLLWQRQHESLRLHPLGTACKGQVFFLQLQDLDKVAANPKAQSEEQVA
QDTEEVFRSYVFYRHQQEQEAEGVAAPADPEMVTLPLQPSSTMGQVGRQLAIIGDDINRR
YDSEFQTMLQHLQPTAENAYEYFTKIATSLFESGINWGRVVALLGFGYRLALHVYQHGLT
GFLGQVTRFVVDFMLHHCIARWIAQRGGWVAALNLGNGPILNVLVVLGVVLLGQFVVRRF
FKS

>gi568815592r:33473806_33677604|GENSCAN_predicted_CDS_3|1452_bp
atggtgccttctcctggaagccttctggattcctccctgctggcattgcttgcttccttc
tctgcactctccaaactatactacagcaacatcatcatctggttcttaactgcgcgggtc
tgttacggccctcccaccactgactgtgagtttctggaggccagggagctgccttcagca
caggaggccccgcgctccgccgccggtcgacccctgagggcgaggccagagggaacggaa
atgtggcacggttcggcagttctcagatgcgagcgcctgcgcaggtacgcacgctccgct
ggagcctggggtggcctggcagtcgtggccgagacgtgtttgctgcacttcggccttcga
ctcttcccggactccaggtcccaggccgccccgctccaccctgcggatgatggagacaaa
gtcccccacaagcccctcatatggggcaagggggaagaaatgacccaggcctctcagcgc
tactcaggcaaccccaggactgtgactcctgggacagggcaggctggctggggaggggat
gagaagaaggaggagggaccagaaagggcagataccaagattcaaacccttcgatgtgaa
aagacaaaagaaggggttggtggtctggcacgggccaagcgtacctggccatccacaatg
ctcacctccaccacggtgatctctggccgggacgtagagccagccaggtaccacccctcc
ttcgccctgccttccccaggaagctcactctttgagggccttctctggcagcggcagcat
gagagcctgcgtcttcacccactggggacagcatgcaaagggcaggtattcttccttcaa
ctgcaggatctggataaagtggctgctaatcccaaagcacagtcagaggagcaggtagcc
caggacacagaggaggttttccgcagctacgttttttaccgccatcagcaggaacaggag
gctgaaggggtggctgcccctgccgacccagagatggtcaccttacctctgcaacctagc
agcaccatggggcaggtgggacggcagctcgccatcatcggggacgacatcaaccgacgc
tatgactcagagttccagaccatgttgcagcacctgcagcccacggcagagaatgcctat
gagtacttcaccaagattgccaccagcctgtttgagagtggcatcaattggggccgtgtg
gtggctcttctgggcttcggctaccgtctggccctacacgtctaccagcatggcctgact
ggcttcctaggccaggtgacccgcttcgtggtcgacttcatgctgcatcactgcattgcc
cggtggattgcacagaggggtggctgggtggcagccctgaacttgggcaatggtcccatc
ctgaacgtgctggtggttctgggtgtggttctgttgggccagtttgtggtacgaagattc
ttcaaatcatga

>gi568815592r:33473806_33677604|GENSCAN_predicted_peptide_4|1210_aa
MSEMSSFLHIGDIVSLYAEGSVNGFISTLGLVDDRCVVEPAAGDLDNPPKKFRDCLFKVC
PMNRYSAQKQYWKAKQTKQDKEKIADVVLLQKLQHAAQMEQKQNDTENKKVHGDVVKYGS
VIQLLHMKSNKYLTVNKRLPALLEKNAMRVTLDATGNEGSWLFIQPFWKLRSNGDNVVVG
DKVILNPVNAGQPLHASNYELSDNAGCKEVNSVNCNTSWKINLFMQFRDHLEEVLKGGDV
VRLFHAEQEKFLTCDEYKGKLQVFLRTTLRQSATSATSSNALWEVEVVHHDPCRGGAGHW
NGLYRFKHLATGNYLAAEENPSYKGDASDPKAAGMGAQGRTGRRNAGEKIKYCLVAVPHG
NDIASLFELDPTTLQKTDSFVPRNSYVRLRHLCTNTWIQSTNVPIDIEEERPIRLMLGTC
PTKEDKEAFAIVSVPVSEIRDLDFANDASSMLASAVEKLNEGFISQNDRRFVIQLLEDLV
FFVSDVPNNGQNVLDIMVTKPNRERQKLMREQNILKQVFGILKAPFREKGGEGPLVRLEE
LSDQKNAPYQHMFRLCYRVLRHSQEDYRKNQEHIAKQFGMMQSQIGYDILAEDTITALLH
NNRKLLEKHITKTEVETFVSLVRKNREPRFLDYLSDLCVSNHIAIPVTQELICKCVLDPK
NSDILIRTELLVVCRLRPVKEMAQSHEYLSIEYSEEEVWLTWTDKNNEHHEKSVRQLAQE
ARAGNAHDENVLSYYRYQLKLFARMCLDRQYLAIDEISQQLGVDLIFLCMADEMLPFDLR
ASFCHLMLHVHVDRDPQELVTPVKFARLWTEIPTAITIKDYDSNLNASRDDKKNKFANTM
EFVEDYLNNVVSEAVPFANEEKNKLTFEVVSLAHNLIYFGFYSFSELLRLTRTLLGIIDC
VQGPPAMLQAYEDPGGKNVRRSIQGVGHMMSTMVLSRKQSVFSAPSLSAGASAAEPLDRS
KFEENEDIVVMETKLKILEILQFILNVRLDYRISYLLSVFKKEFVEVFPMQDSGADGTAP
AFDSTTANMNLDRIGEQAEAMFGVGKTSSMLEVDDEGGRMFLRVLIHLTMHDYAPLVSGA
LQLLFKHFSQRQEAMHTFKQVQLLISAQDVENYKVIKSELDRLRTMVEKSELWVDKKGSG
KGEEVEAGAAKDKKERPTDEEGFLHPPGEKSSENYQIVKGILERLNKMCGVGEQMRKKQQ
RLLKNMDAHK

>gi568815592r:33473806_33677604|GENSCAN_predicted_CDS_4|3630_bp
atgagtgaaatgtccagctttcttcacatcggggacatcgtctccctgtacgccgagggc
tccgtcaatggcttcatcagcactttggggctggtggatgaccgctgtgtggtggagccc
gcggccggggacctggacaacccccctaagaagttccgtgactgcctcttcaaggtgtgc
cccatgaaccgctactcggcccagaagcagtactggaaggccaagcagactaagcaggac
aaggagaagatcgctgatgtggtgttgctgcagaagctgcagcatgcggcgcagatggag
cagaagcaaaatgacacggagaacaagaaggtgcatggggatgtcgtgaagtatggcagt
gtgatccagctcctgcacatgaagagcaacaagtacctgacagtgaacaagcggcttccg
gccttgctggagaagaacgccatgcgggtgactctggatgccacaggcaacgagggttcc
tggctcttcatccagcccttctggaagctgcggagcaacggggacaacgtggtcgtgggg
gacaaggtgatcctgaatcctgtcaatgccgggcagcctctgcatgccagcaattacgag
ctcagcgacaacgccggctgcaaggaggtcaattctgtgaactgcaacaccagctggaag
atcaacctgtttatgcagtttcgggaccacctggaggaggtgttgaaagggggagacgtg
gtgcggctgttccatgcggagcaggagaagttcctgacgtgtgacgagtacaagggcaag
ctgcaggtgttcctgcgaactacactgcgccagtctgccacctcggccaccagctccaat
gctctctgggaggtggaggtggtccaccacgacccctgccgtggaggagctgggcactgg
aatggcttgtaccgcttcaagcacctggctacaggcaactacctggctgctgaggagaac
cccagttacaaaggtgatgcctcagatcccaaggcagcaggaatgggggcacagggccgc
acaggccgcaggaatgctggggagaagatcaagtactgcctggtggctgtgcctcatggc
aatgacatcgcctctctctttgagctggaccccaccaccttgcagaaaaccgactctttc
gtgccccggaactcgtacgtccggctgcggcacctctgcaccaacacgtggattcagagc
accaatgtgcccattgacatcgaggaggagcggcccatccggctcatgctgggcacctgc
cccaccaaggaggacaaggaggcctttgccatcgtgtcagtgcccgtgtctgagatccga
gacctggactttgccaatgacgccagctccatgctggccagtgccgtggagaaactcaac
gagggcttcatcagccagaatgaccgcaggtttgtcatccagctgctggaagacctggtg
ttctttgtcagcgatgtccccaacaatgggcagaatgtcctggacatcatggtcactaag
cccaaccgggaacggcagaagctgatgagggagcagaacatcctcaaacaggtctttggc
attctgaaggccccgttccgtgagaaggggggtgaaggtcccctggtgcggctggaggag
ctgtcagaccagaagaacgccccctaccagcacatgttccgcctgtgctaccgcgtgttg
cggcattcccaggaggactaccgcaagaaccaggagcacattgccaagcagtttgggatg
atgcagtcccagattggctacgacatcctggccgaggacaccatcactgccctgctgcac
aacaaccgcaagctcctggaaaagcacatcaccaagaccgaggtggagaccttcgtcagc
cttgtgcgcaagaaccgggagcccaggttcctggactacctctctgacctgtgtgtgtcc
aaccacatcgccatccccgtcacccaagagctcatctgcaagtgtgtgctggaccccaag
aacagtgacattctcatccggaccgagttgctggtggtctgcaggcttcggcccgtgaag
gagatggcccaatcccacgagtacctgagcatcgagtactcagaagaggaagtgtggctc
acgtggactgacaagaataacgagcatcatgagaagagtgtgaggcagctggcccaggag
gcgcgggccggcaacgcccacgacgagaatgtgctcagctactacaggtaccagctgaag
ctctttgcccgcatgtgcttggaccgccagtacttggccatcgacgagatctcccagcag
ctgggcgtggacctgattttcctgtgcatggcagacgagatgctgccctttgacctgcgc
gcctccttctgccacctgatgctgcacgtgcacgtggaccgtgacccccaggagctggtc
acgccggtcaagtttgcccgtctctggactgagatccccacagccatcaccatcaaggac
tatgattccaacctcaacgcgtcccgagatgacaagaagaacaagtttgccaacaccatg
gagttcgtggaggactacctcaacaatgtagtcagcgaggccgtgccctttgccaacgag
gagaagaacaagctcacttttgaggtggtcagcctggcgcacaatctcatctacttcggc
ttctacagcttcagcgagctgctgcggctcactcgcacactgctgggcatcatcgactgt
gtgcaggggcccccggccatgctgcaggcctatgaggaccccggtggcaagaatgtgcgg
cggtccatccagggcgtggggcacatgatgtccaccatggtgctgagccgcaagcagtcc
gtcttcagtgcccccagcctgtctgctggggccagtgctgctgagccgctggacagaagc
aagtttgaggagaatgaggacattgtggtgatggagaccaagctgaagatcctggaaatc
cttcagttcatcctcaatgtccgcctggattaccgcatatcctacctgctgtctgtcttc
aagaaggagtttgtggaggtgtttcccatgcaggacagtggggctgatggcacagcccct
gccttcgactctaccactgccaacatgaacctggatcgcatcggggagcaggcggaggcc
atgtttggagtggggaagacaagcagcatgctggaggtggatgacgagggcggccgcatg
ttcctgcgcgtgctcatccacctcaccatgcacgactatgcgccgctggtctcgggtgcc
ctgcagctgctcttcaagcacttcagccagcgccaggaggccatgcacaccttcaagcag
gttcagctgctgatctcagcgcaggacgtggagaactacaaggtgatcaagtcggagctg
gaccggctgcggaccatggtggagaagtcagagctgtgggtggacaagaagggcagtggc
aagggtgaggaggtggaggcaggcgccgccaaggacaagaaagagcgtcccacggacgag
gagggctttctgcacccaccaggggagaaaagcagtgagaactaccagatcgtcaagggc
atcctggaaaggctgaacaagatgtgcggggttggggagcaaatgaggaagaagcagcaa
cggctgctgaagaacatggatgcccacaag