GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:28:52

Sequence gi568815585f:48671179_48871826 : 200648 bp : 40.20% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    290    285    6                               1.05
 1.02 Term -   3380   2602  779  0  2   -5   36   407 0.332  18.74
 1.01 Init -   4920   4866   55  0  1  102   37    71 0.238   4.90
 1.00 Prom -  17564  17525   40                              -4.85

 2.00 Prom +  17859  17898   40                              -7.65
 2.01 Sngl +  26764  27402  639  0  0   54   43   283 0.770  16.33
 2.02 PlyA +  27630  27635    6                               1.05

 3.00 Prom +  28110  28149   40                              -3.35
 3.01 Sngl +  28746  29573  828  2  0   70   43   187 0.547   7.88
 3.02 PlyA +  29742  29747    6                               1.05

 4.00 Prom +  31685  31724   40                              -4.25
 4.01 Sngl +  35640  36680 1041  2  0   99   49   567 0.940  50.77
 4.02 PlyA +  37524  37529    6                               1.05

 5.00 Prom +  45650  45689   40                              -5.45
 5.01 Init +  51735  51762   28  2  1   83   95    12 0.254   0.66
 5.02 Intr +  56875  57002  128  2  2  103   80    61 0.373   6.28
 5.03 Term +  57886  57984   99  0  0   97   36    52 0.284  -1.95
 5.04 PlyA +  58207  58212    6                               1.05

 6.09 PlyA -  58548  58543    6                               1.05
 6.08 Term -  60047  59867  181  1  1   94   49   120 0.214   4.80
 6.07 Intr -  60680  60581  100  0  1   40  100    26 0.268  -2.75
 6.06 Intr -  61490  61410   81  0  0   75   94    72 0.603   5.19
 6.05 Intr -  62461  62426   36  2  0  122   61    59 0.164   3.92
 6.04 Intr -  62965  62801  165  2  0   62   42   137 0.660   5.51
 6.03 Intr -  67447  67092  356  0  2   44   35   177 0.200   2.01
 6.02 Intr -  68034  67969   66  2  0   91   80    53 0.203   1.90
 6.01 Init -  72510  72449   62  0  2   78   61    46 0.258   1.67
 6.00 Prom -  73965  73926   40                              -3.05

 7.00 Prom +  75618  75657   40                              -5.35
 7.01 Sngl +  80013  80459  447  2  0   71   54   158 0.276   6.68
 7.02 PlyA +  80759  80764    6                               1.05

 8.00 Prom +  83046  83085   40                              -6.35
 8.01 Init +  88586  88646   61  1  1   83   70    59 0.178   5.06
 8.02 Term + 100440 100651  212  1  2    5   46   256 0.369   9.57
 8.03 PlyA + 100670 100675    6                               1.05

 9.00 Prom + 104501 104540   40                              -4.55
 9.01 Init + 106979 107031   53  1  2   74   52    87 0.833   4.38
 9.02 Intr + 111931 112110  180  1  0  113   95   166 0.977  17.86
 9.03 Term + 115349 115463  115  2  1   78   55    58 0.501  -1.44
 9.04 PlyA + 116342 116347    6                               1.05

10.00 Prom + 125994 126033   40                              -6.75
10.01 Init + 127187 127364  178  1  1   60  108   108 0.195   9.47
10.02 Term + 147462 147724  263  1  2   12   52   228 0.159   6.30
10.03 PlyA + 148267 148272    6                               1.05

11.00 Prom + 160986 161025   40                              -4.05
11.01 Init + 161940 162037   98  2  2   56   42    76 0.193  -0.37
11.02 Intr + 172208 172301   94  2  1  110   91    27 0.702   4.25
11.03 Intr + 172861 172934   74  0  2   81   70    73 0.819   2.09
11.04 Intr + 173277 173408  132  0  0   66  110    55 0.901   4.34
11.05 Intr + 175121 175251  131  2  2   24   68   138 0.790   4.82
11.06 Intr + 177114 177231  118  1  1   78   60    54 0.244   0.20
11.07 Intr + 184924 184961   38  1  2   86  111    42 0.264   3.29
11.08 Term + 193720 193832  113  2  2   56   47   110 0.223   1.44
11.09 PlyA + 193951 193956    6                               1.05

12.02 PlyA - 195491 195486    6                              -0.45
12.01 Term - 197359 197093  267  1  0   85   49   161 0.793   6.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:48671179_48871826|GENSCAN_predicted_peptide_1|277_aa
MAEQEQLRFAAPSKTNAETQCKKSKNIDNRLKKLLTRITSLEQNIKDLMELKNTARELYE
AYTSINSRIDQMEERISEIEDLLNEIKHEDKIKEKIMKRNKQSLKICDYMKRPNLHLIGV
PESDGENGSKLGNTLPDIIQENFPTLARQANIQIQEIQRTPLRYSSIRATPRHIIIRFTR
AEVKEKMLRTVRQKGWVTHKGKPIRLTADLSAETLQARKEWGPIFNILKEKNFQPGISRP
AKISFTGEGEIKSFTDKQMVRDFVTTRPALQELQRKH

>gi568815585f:48671179_48871826|GENSCAN_predicted_CDS_1|834_bp
atggctgaacaggaacagctccggtttgcagctcccagtaagaccaatgcagaaacccaa
tgcaagaaatctaagaacattgataacaggttaaagaaactgctaactagaataaccagt
ttagagcagaacataaaagacctgatggagctgaagaacacagcacgagaactttatgaa
gcatatacaagtatcaatagcagaatcgatcaaatggaagaaaggatatcagagattgaa
gatctacttaatgaaataaagcatgaagacaagattaaagaaaaaataatgaaaaggaac
aaacaaagcctcaaaatatgtgactatatgaaaagaccaaacctacatctgattggtgta
cctgaaagtgacggggagaatggatctaagttgggaaacacacttccagatattatccaa
gagaacttccctaccctagcaagacaggccaacattcaaattcaggaaatacagagaaca
ccactaagatactcctcaataagagcaaccccaagacacataatcatcagattcaccagg
gctgaagtgaaggaaaaaatgttaaggacagtcagacagaaaggttgggttacccacaaa
gggaagcccatcagactaaccgcagatctctccgcagaaactctacaagccagaaaagag
tgggggccaatattcaacattcttaaagaaaagaattttcaacccggaatttcacgtcct
gctaaaataagcttcacaggtgaaggagaaataaaatcgtttacagacaagcaaatggtg
agggattttgtcaccaccaggcctgccttacaagagctccaaaggaagcactaa

>gi568815585f:48671179_48871826|GENSCAN_predicted_peptide_2|212_aa
MKQEEKHREKKVKRNEKSLQEIWEDYVKRPKLRLIGVPASDGENGTKLENTLQDIIQENF
PNLARQANIEIQEIQRTPLRYSSRRATPRHIIVRFTKVEMKEKMLKAPREKGRVTHKGKP
IRLTADPLAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKSFTDKQMLRDF
VTTKPALQELLKEALNMERNNQFQPLQKHAKL

>gi568815585f:48671179_48871826|GENSCAN_predicted_CDS_2|639_bp
atgaagcaagaagagaagcatagagagaaaaaagtaaaaagaaatgaaaaaagcctccaa
gaaatatgggaggactatgtgaaaagaccaaaactacgtctgattggtgtacctgcaagt
gacggggagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttc
cccaacctagcgaggcaggccaacattgaaattcaggaaatacagagaacaccactaaga
tactcctcgagaagagcaactccaagacacataattgtcagattcaccaaagttgaaatg
aaggaaaaaatgttaaaggcacccagagagaaaggtagggttacccacaaagggaagccc
atcagactaacagcagatcccttggcagaaactctacaagccagaagagagtgggggcca
attttcaacattcttaaagaaaagaattttcaacccagaatttcatatccagccaaacta
agcttcataagtgaaggagaaataaaatcctttacagacaagcaaatgctgagagatttt
gtcaccaccaagcctgccttacaagagctcctgaaggaagcactaaacatggaaaggaac
aaccagttccagccactgcaaaaacatgccaaattgtaa

>gi568815585f:48671179_48871826|GENSCAN_predicted_peptide_3|275_aa
MDKFLDTYTLPRLNQKEVESLNRPITGSEIEGIINILPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFYEANIILIPKPGRDTTTKENFRLMSFMNIDAKILNKILA
NQIQQHIKKLIHHDQVGFIPGMQGWFNICKSINVIHHVNRTKDKNHMIISIDAEKAFNKI
QQPFMLKSVNKLGIWTYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFN
IVLDVLARAIRQEKEIKGIKLGKEEVKLSLFADDI

>gi568815585f:48671179_48871826|GENSCAN_predicted_CDS_3|828_bp
atggataaattcctggacacatataccctcccaagactaaatcagaaagaagttgaatcc
ctgaatagaccaataacaggttctgaaattgagggaataattaatatcctaccaaccaaa
aaaagtccaggaccagatggattcacagccgaattctaccagaggtacaaagaggagctg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaattca
ttttatgaggccaacatcatcctgataccaaagcctggcagagacacaacaacaaaagag
aattttagactgatgtccttcatgaacattgatgcaaaaatcctaaataaaatactggca
aaccaaatccagcagcacatcaaaaagcttatccaccacgatcaagttggcttcatccct
gggatgcaaggctggttcaacatatgcaaatcaataaacgtaatccatcatgtaaacaga
accaaagacaaaaaccacatgattatctccatagatgcagaaaaggccttcaacaaaatt
caacaacccttcatgctaaaaagtgtcaataaactaggtatttggacgtatctcaaaata
ataagagctatttatgacaaacccacagccaatatcatactgaatgggcaaaaattggaa
gcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaac
atagtgttggacgttctggccagggcaatcaggcaagagaaagaaataaagggtattaaa
ttaggaaaagaggaagtcaaattgtcactgtttgcagatgacatttag

>gi568815585f:48671179_48871826|GENSCAN_predicted_peptide_4|346_aa
MERKFMSLQPSISVSEMEPNGTFSNNNSRNCTIENFKREFFPIVYLIIFFWGVLGNGLSI
YVFLQPYKKSTSVNVFMLNLAISDLLFISTLPFRADYYLRGSNWIFGDLACRIMSYSLYV
NMYSSIYFLTVLSVVRFLAMVHPFRLLHVTSIRSAWILCGIIWILIMASSIMLLDSGSEQ
NGSVTSCLELNLYKIAKLQTMNYIALVVGCLLPFFTLSICYLLIIRVLLKVEVPESGLRV
SHRKALTTIIITLIIFFLCFLPYHTLRTVHLTTWKVGLCKDRLHKALVITLALAAANACF
NPLLYYFAGENFKDRLKSALRKGHPQKAKTKCVFPVSVWLRKETRV

>gi568815585f:48671179_48871826|GENSCAN_predicted_CDS_4|1041_bp
atggagagaaaatttatgtccttgcaaccatccatctccgtatcagaaatggaaccaaat
ggcaccttcagcaataacaacagcaggaactgcacaattgaaaacttcaagagagaattt
ttcccaattgtatatctgataatatttttctggggagtcttgggaaatgggttgtccata
tatgttttcctgcagccttataagaagtccacatctgtgaacgttttcatgctaaatctg
gccatttcagatctcctgttcataagcacgcttcccttcagggctgactattatcttaga
ggctccaattggatatttggagacctggcctgcaggattatgtcttattccttgtatgtc
aacatgtacagcagtatttatttcctgaccgtgctgagtgttgtgcgtttcctggcaatg
gttcacccctttcggcttctgcatgtcaccagcatcaggagtgcctggatcctctgtggg
atcatatggatccttatcatggcttcctcaataatgctcctggacagtggctctgagcag
aacggcagtgtcacatcatgcttagagctgaatctctataaaattgctaagctgcagacc
atgaactatattgccttggtggtgggctgcctgctgccatttttcacactcagcatctgt
tatctgctgatcattcgggttctgttaaaagtggaggtcccagaatcggggctgcgggtt
tctcacaggaaggcactgaccaccatcatcatcaccttgatcatcttcttcttgtgtttc
ctgccctatcacacactgaggaccgtccacttgacgacatggaaagtgggtttatgcaaa
gacagactgcataaagctttggttatcacactggccttggcagcagccaatgcctgcttc
aatcctctgctctattactttgctggggagaattttaaggacagactaaagtctgcactc
agaaaaggccatccacagaaggcaaagacaaagtgtgttttccctgttagtgtgtggttg
agaaaggaaacaagagtataa

>gi568815585f:48671179_48871826|GENSCAN_predicted_peptide_5|84_aa
MATIDSPSTYEKLRHKQFKASWIPNQPLPSTAADQTTPLRSQRESPLQFDAEQCWLPAST
RNQQACSHPRDLAKAITFARNAFL

>gi568815585f:48671179_48871826|GENSCAN_predicted_CDS_5|255_bp
atggctaccatcgattccccctctacctatgaaaagctcaggcataaacaatttaaggca
tcttggattccaaaccaacccctacccagtactgctgcagaccagactacccctcttaga
agtcagagggaatcccctctccaatttgatgctgagcaatgctggcttcctgcctctact
cgaaaccagcaagcatgctcccatcccagggacttggcaaaggctattacctttgcccgg
aatgctttcctttaa

>gi568815585f:48671179_48871826|GENSCAN_predicted_peptide_6|348_aa
MTSATGQLLGRFQEAYNHGRRFSHFYQVALSSSSVPELKNMCGQLLHEEPWKRLQEMTGA
SLLQQKAFRTAGQHGKAACCVRAPAVITVFLGAMGLRKGKQRSLDSLEENTKVYLLFPGL
AVHTHITSFNPCFSRKIAESLRGSGSCQGHTAPKEQGSSDSANQTGSSHESPHSPSDHAK
APNNPHRAQPTSAAAALKAPASLFWVCSHIPANQECYPSQTRLYPSVTSHSRHGKLETNT
VHSCAKCFRRPITLQEVRLYSEPPFCFPYAGNLGSYRSALKAKENEQKSRCPSLMNSRAK
KLLPPVETCVSPTGLNCPVSAQHSSGHPGGSSLGLSSSTRWVVALHLC

>gi568815585f:48671179_48871826|GENSCAN_predicted_CDS_6|1047_bp
atgacatcggcaactggtcagcttctggggaggtttcaggaagcttacaatcatggcaga
aggttcagccatttttatcaagtcgctttgtcgtcttcatcagttcctgagctgaagaac
atgtgcgggcagcttctccatgaagagccttggaagcgcctgcaggaaatgacaggtgca
tctcttttgcagcaaaaggccttcagaacagcagggcagcacggcaaagctgcttgctgt
gtgcgtgccccggcagtcattactgtgttccttggagctatggggctgagaaaggggaag
cagaggagccttgactcgctggaagagaacacaaaagtgtaccttctttttcctggcctt
gcagtccacacacacattacctcatttaatccctgtttttcaaggaagatagcagagtcc
ctaagagggtcaggaagttgtcaaggtcacacagctcctaaagagcagggctcctcagac
tcagctaatcaaactggcagtagccatgagtcacctcacagcccaagtgaccatgctaag
gctcccaacaaccctcacagagctcagccaacgtctgctgctgctgccctgaaggcccca
gcttctctcttctgggtttgctctcacattccagccaaccaggaatgctacccttctcag
actcgcctctatcctagtgtcacttcccacagcagacatgggaaactggaaaccaacacc
gttcattcctgtgccaagtgctttaggcgcccaataaccctacaagaggtgcggctttac
tctgagcctcctttttgctttccatacgctggaaatctaggctcttacaggtctgctctg
aaggctaaagagaatgaacagaaaagcaggtgcccaagcctgatgaattcccgtgctaaa
aaactgctgcctcctgtggagacctgtgtgtctcccacagggctgaattgccctgtgtct
gcccagcacagctctgggcacccaggtggctcctccctgggcctcagcagcagcacaaga
tgggttgtagccctgcatctctgttaa

>gi568815585f:48671179_48871826|GENSCAN_predicted_peptide_7|148_aa
MADMPFKLSSDIASFAEPHRPHSEFHVLSSPSEDSVKASTEHFSYCCSPICQTSALDYEL
PEGRTHSCSPLAAQSSPVPGMKERSISCLPNEWILKYPVCSLVTQCNTLGHKISSCLKAG
AGSMHSQLESESEQLCSKARQESGTHYY

>gi568815585f:48671179_48871826|GENSCAN_predicted_CDS_7|447_bp
atggcagatatgccttttaaacttagctcagacattgcttcctttgcagaaccacaccgg
ccacactcagagttccatgtgctctcttcaccctcagaggactctgtaaaagccagcacg
gagcacttctcttactgttgttcacctatttgtcagacttcagcactagactatgagctc
cctgagggccggactcactcttgttcacctttagctgctcagtccagcccagtgcctgga
atgaaagagaggtccatttcatgtttaccaaatgaatggattctgaaataccctgtctgc
tctctggttacgcagtgcaacaccttaggccataaaattagttcctgcttaaaagcagga
gcaggctctatgcactcccagttagagtcagaatctgagcagctatgttccaaggctaga
caagagtctgggacacactactactga

>gi568815585f:48671179_48871826|GENSCAN_predicted_peptide_8|90_aa
MAEGKEEAGTSYKARAGGKKKRGDAAAKASEETHVMDYRALVHERDEAAYGELRAMVLDL
RAFYAELYHIINSNLEKIVNPKGEKKPSMY

>gi568815585f:48671179_48871826|GENSCAN_predicted_CDS_8|273_bp
atggcagaaggcaaagaggaggcaggcacttcttacaaggctagagcaggaggaaaaaag
aaacgtggggatgctgcggccaaggcctccgaggagactcatgtaatggattaccgggcc
ttggtgcatgagcgagatgaggcagcctatggggagctcagggccatggtgctggacctg
agggccttctatgctgagctttatcatatcatcaacagcaacctggagaaaattgtcaac
ccaaagggtgaaaagaagccatctatgtactga

>gi568815585f:48671179_48871826|GENSCAN_predicted_peptide_9|115_aa
MPQDWCGEDAVLQPLDVRNGSPSGPDYCESCCFSGSSYPLELPDSMLVLENVCKGSSDVT
CPLVFQRWVPAAADESDRFQGSSLSQTMPEFSYKKPGKTVTSTHVIIQKPFGVKF

>gi568815585f:48671179_48871826|GENSCAN_predicted_CDS_9|348_bp
atgcctcaggactggtgtggtgaagacgctgtgcttcagccgctggacgttaggaatggc
agtccctcagggccagactactgtgaatcctgctgcttttctggatctagttacccactg
gagctgccagactccatgctggtgctggagaatgtttgcaagggatctagtgatgtgacc
tgtcctctagtcttccagcggtgggtaccagcagcagctgatgagagtgatagatttcag
ggttccagtctttcccaaacaatgcctgaattctcatacaagaaacctggcaaaactgtg
acttcaactcatgttataattcaaaaaccctttggtgtcaaattttga

>gi568815585f:48671179_48871826|GENSCAN_predicted_peptide_10|146_aa
MKYRKQKANTEGDVNPQCNFERRSQDKSYESDLESNRPRLQWITRFWNIFLQDEIDSLTT
VLSQRNLLEKHKGSENQQEAGVTGIKQLKPAGTNGTGGPGSKNTATATQQNGLVKHCPIP
DTNGLFLPSFQHLLKTQVPEMVNPIG

>gi568815585f:48671179_48871826|GENSCAN_predicted_CDS_10|441_bp
atgaaatatagaaaacagaaagcaaacacagaaggtgacgtgaatcctcagtgtaatttt
gaaaggaggtctcaggataagagctatgaatcagatctagagagcaaccgtcccagacta
cagtggatcacaagattctggaatatatttcttcaagatgaaattgatagtttaacaact
gtcttaagccaaaggaatttgttggagaaacataagggctcagaaaatcaacaggaggct
ggagtaacaggcattaagcaactaaaaccagctggaactaatggcactggaggaccaggc
agtaagaacacagctacagccacacagcagaatggactggtcaaacactgccccatccct
gatacaaatggcctgtttcttccatcctttcagcacttgctcaagactcaagttcctgag
atggtgaatccaattggttga

>gi568815585f:48671179_48871826|GENSCAN_predicted_peptide_11|265_aa
MASTSGGDTVNIVEMITKNLEYYINLADEAVASSVCPSVVRCLHYLHWPLVDNPLHVEMS
MTGQPRRLAFGTANTVDHSHAPIDLEEIWLKVAFQENGLCDLLRKEWSKINYSMTKGTIS
GSHLPTLSRFIPRYSFTRTPRCPGDPLTYLGLICTDFPVLTGEKIGIMYPINMLAAAADC
KLCLILPKSAFKWHHVCARKLAMGQSLHHKDAINQGAMELINSSYNVAGSFSRCIENKLE
GTRMEAESPFRRLMQQIRVRKKKVA

>gi568815585f:48671179_48871826|GENSCAN_predicted_CDS_11|798_bp
atggcatctacttctggtggagatactgtgaacattgttgaaatgataacaaagaattta
gaatattacataaacttagctgatgaagcagtggcaagctctgtctgcccctctgtggtg
agatgccttcactatttgcactggcctcttgtggataatccattgcatgtagaaatgtca
atgacaggacagcccagaaggctggcttttggcacagctaacacagttgaccattctcat
gctcctattgacctagaagaaatctggttgaaagtggccttccaagaaaatggtctttgt
gatctgcttaggaaagagtggtcaaaaattaactattctatgaccaagggcaccatttct
ggcagccaccttccaactttgtccaggtttatacccagatatagcttcacgaggacccct
cgctgcccaggggacccactcacatatctaggactcatctgcacagatttcccggtgctg
actggagagaaaatcggcatcatgtatcccattaatatgctagctgctgctgctgattgc
aaattatgcctgattcttcccaagtctgcattcaaatggcatcacgtttgtgcccggaaa
ttggccatggggcagtccttacaccacaaagatgctataaatcagggtgccatggaactc
atcaacagctcctacaatgtagcaggatcgttcagccgctgcattgagaacaaactggag
ggcacaaggatggaagcagagagtccttttaggaggctgatgcaacaaatccgggtaaga
aagaagaaagtggcctga

>gi568815585f:48671179_48871826|GENSCAN_predicted_peptide_12|88_aa
QAKLIALTRALTLAKELHVNIYADCKYAFHILHQHDVIWAERGFLTVQGSSSIINASLIK
TLLKATLLPKEAGVIHYKGHQKASAPIA

>gi568815585f:48671179_48871826|GENSCAN_predicted_CDS_12|267_bp
caagccaaactcattgccttaactcgagccctcactcttgcaaaggaattgcatgtcaat
atttatgctgactgtaaatatgccttccatatcctgcaccagcatgatgttatatgggct
gaaagaggtttcctcactgtgcaagggtcctcctccatcattaatgcctctttaataaaa
actcttctcaaggccactttacttccaaaggaagctggagtcatacactacaagggccat
caaaaggcatcagctcccatcgcttag