Result of FASTA (omim) for pF1KB6663
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6663, 424 aa
  1>>>pF1KB6663 424 - 424 aa - 424 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 14.5805+/-0.000544; mu= -18.6243+/- 0.034
 mean_var=990.6158+/-207.122, 0's: 0 Z-trim(125.9): 234  B-trim: 909 in 1/59
 Lambda= 0.040749
 statistics sampled from 50225 (50603) to 50225 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.823), E-opt: 0.2 (0.593), width:  16
 Scan time: 11.610

The best scores are:                                      opt bits E(85289)
NP_005841 (OMIM: 154400,605593) splicing factor 3B ( 424) 3164 201.0 4.9e-51
XP_016857329 (OMIM: 606373,616193) PREDICTED: form (1102)  515 45.8 0.00066
XP_016857330 (OMIM: 606373,616193) PREDICTED: form (1102)  515 45.8 0.00066
XP_016857328 (OMIM: 606373,616193) PREDICTED: form (1159)  515 45.8 0.00068
XP_011542539 (OMIM: 606373,616193) PREDICTED: form (1360)  515 45.9 0.00074
XP_016857327 (OMIM: 606373,616193) PREDICTED: form (1384)  515 45.9 0.00075
XP_016857326 (OMIM: 606373,616193) PREDICTED: form (1417)  515 45.9 0.00076
NP_064450 (OMIM: 606373,616193) formin-2 isoform 2 (1722)  515 46.0 0.00086
NP_001292353 (OMIM: 606373,616193) formin-2 isofor (1726)  515 46.0 0.00086
NP_006240 (OMIM: 168840) basic salivary proline-ri ( 309)  449 41.2  0.0045
NP_005030 (OMIM: 180989) basic salivary proline-ri ( 331)  442 40.8  0.0063
NP_061939 (OMIM: 176270,605283,615547) MAGE-like p (1249)  461 42.7  0.0064


>>NP_005841 (OMIM: 154400,605593) splicing factor 3B sub  (424 aa)
 initn: 3164 init1: 3164 opt: 3164  Z-score: 1037.2  bits: 201.0 E(85289): 4.9e-51
Smith-Waterman score: 3164; 100.0% identity (100.0% similar) in 424 aa overlap (1-424:1-424)

               10        20        30        40        50        60
pF1KB6 MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 GSFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GSFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 MPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGS
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB6 PMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPRGPLRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPRGPLRG
              370       380       390       400       410       420

           
pF1KB6 PLPQ
       ::::
NP_005 PLPQ
           

>>XP_016857329 (OMIM: 606373,616193) PREDICTED: formin-2  (1102 aa)
 initn: 1060 init1: 321 opt: 515  Z-score: 191.2  bits: 45.8 E(85289): 0.00066
Smith-Waterman score: 542; 42.1% identity (52.1% similar) in 240 aa overlap (212-424:298-528)

             190       200       210       220           230       
pF1KB6 SKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSL----GSGLPPPGM
                                     :  ::::  :.  .  :    :.:.:::  
XP_016 VPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPP--
       270       280       290       300       310       320       

        240        250          260        270       280           
pF1KB6 PP-PGS-FPPPVPPPGA---LPPGIPPA-MPPPPMPPGAAGHGPPSAGTPGAG------H
       :: ::. .::: : :::   ::: .: : .::::  :::.   ::    ::::       
XP_016 PPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAG--IPPPPPLPGAGIPPPPPL
         330       340       350       360         370       380   

         290       300        310        320        330       340  
pF1KB6 PGHGHSHPHPFPPGGMPHPG-MSQMQLAHHGP-HGLGHPHAGP-PGSGGQPPPRPPPGMP
       :: :   : :.: .:.: :  .    .    :  : : :   : ::.:  ::: : ::  
XP_016 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP-PLPGAG
           390       400       410       420       430        440  

               350       360       370       380       390         
pF1KB6 HPGPPPM---GMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRG
        : :::.   :.::  :  :. .  : :.:  :.  :::  ::   .: : :::      
XP_016 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI--PPP--PPLPGVGIPPPPPLPGAGI
            450       460       470           480       490        

     400           410        420                                  
pF1KB6 PLPPPRP----TPRPPVPPRG-PLRGPLPQ                              
       : ::: :     : ::.:  : :   :::.                              
XP_016 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPP
      500       510       520       530       540       550        

>>XP_016857330 (OMIM: 606373,616193) PREDICTED: formin-2  (1102 aa)
 initn: 1060 init1: 321 opt: 515  Z-score: 191.2  bits: 45.8 E(85289): 0.00066
Smith-Waterman score: 542; 42.1% identity (52.1% similar) in 240 aa overlap (212-424:298-528)

             190       200       210       220           230       
pF1KB6 SKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSL----GSGLPPPGM
                                     :  ::::  :.  .  :    :.:.:::  
XP_016 VPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPP--
       270       280       290       300       310       320       

        240        250          260        270       280           
pF1KB6 PP-PGS-FPPPVPPPGA---LPPGIPPA-MPPPPMPPGAAGHGPPSAGTPGAG------H
       :: ::. .::: : :::   ::: .: : .::::  :::.   ::    ::::       
XP_016 PPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAG--IPPPPPLPGAGIPPPPPL
         330       340       350       360         370       380   

         290       300        310        320        330       340  
pF1KB6 PGHGHSHPHPFPPGGMPHPG-MSQMQLAHHGP-HGLGHPHAGP-PGSGGQPPPRPPPGMP
       :: :   : :.: .:.: :  .    .    :  : : :   : ::.:  ::: : ::  
XP_016 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP-PLPGAG
           390       400       410       420       430        440  

               350       360       370       380       390         
pF1KB6 HPGPPPM---GMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRG
        : :::.   :.::  :  :. .  : :.:  :.  :::  ::   .: : :::      
XP_016 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI--PPP--PPLPGVGIPPPPPLPGAGI
            450       460       470           480       490        

     400           410        420                                  
pF1KB6 PLPPPRP----TPRPPVPPRG-PLRGPLPQ                              
       : ::: :     : ::.:  : :   :::.                              
XP_016 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPP
      500       510       520       530       540       550        

>>XP_016857328 (OMIM: 606373,616193) PREDICTED: formin-2  (1159 aa)
 initn: 1060 init1: 321 opt: 515  Z-score: 190.9  bits: 45.8 E(85289): 0.00068
Smith-Waterman score: 542; 42.1% identity (52.1% similar) in 240 aa overlap (212-424:355-585)

             190       200       210       220           230       
pF1KB6 SKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSL----GSGLPPPGM
                                     :  ::::  :.  .  :    :.:.:::  
XP_016 VPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPP--
          330       340       350       360       370       380    

        240        250          260        270       280           
pF1KB6 PP-PGS-FPPPVPPPGA---LPPGIPPA-MPPPPMPPGAAGHGPPSAGTPGAG------H
       :: ::. .::: : :::   ::: .: : .::::  :::.   ::    ::::       
XP_016 PPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAG--IPPPPPLPGAGIPPPPPL
            390       400       410       420         430       440

         290       300        310        320        330       340  
pF1KB6 PGHGHSHPHPFPPGGMPHPG-MSQMQLAHHGP-HGLGHPHAGP-PGSGGQPPPRPPPGMP
       :: :   : :.: .:.: :  .    .    :  : : :   : ::.:  ::: : ::  
XP_016 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP-PLPGAG
              450       460       470       480       490          

               350       360       370       380       390         
pF1KB6 HPGPPPM---GMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRG
        : :::.   :.::  :  :. .  : :.:  :.  :::  ::   .: : :::      
XP_016 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI--PPP--PPLPGVGIPPPPPLPGAGI
     500       510       520       530           540       550     

     400           410        420                                  
pF1KB6 PLPPPRP----TPRPPVPPRG-PLRGPLPQ                              
       : ::: :     : ::.:  : :   :::.                              
XP_016 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPP
         560       570       580       590       600       610     

>>XP_011542539 (OMIM: 606373,616193) PREDICTED: formin-2  (1360 aa)
 initn: 1060 init1: 321 opt: 515  Z-score: 190.2  bits: 45.9 E(85289): 0.00074
Smith-Waterman score: 542; 42.1% identity (52.1% similar) in 240 aa overlap (212-424:922-1152)

             190       200       210       220           230       
pF1KB6 SKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSL----GSGLPPPGM
                                     :  ::::  :.  .  :    :.:.:::  
XP_011 VPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPP--
             900       910       920       930       940           

        240        250          260        270       280           
pF1KB6 PP-PGS-FPPPVPPPGA---LPPGIPPA-MPPPPMPPGAAGHGPPSAGTPGAG------H
       :: ::. .::: : :::   ::: .: : .::::  :::.   ::    ::::       
XP_011 PPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAG--IPPPPPLPGAGIPPPPPL
     950       960       970       980         990      1000       

         290       300        310        320        330       340  
pF1KB6 PGHGHSHPHPFPPGGMPHPG-MSQMQLAHHGP-HGLGHPHAGP-PGSGGQPPPRPPPGMP
       :: :   : :.: .:.: :  .    .    :  : : :   : ::.:  ::: : ::  
XP_011 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP-PLPGAG
      1010      1020      1030      1040      1050      1060       

               350       360       370       380       390         
pF1KB6 HPGPPPM---GMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRG
        : :::.   :.::  :  :. .  : :.:  :.  :::  ::   .: : :::      
XP_011 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI--PPP--PPLPGVGIPPPPPLPGAGI
       1070      1080      1090      1100          1110      1120  

     400           410        420                                  
pF1KB6 PLPPPRP----TPRPPVPPRG-PLRGPLPQ                              
       : ::: :     : ::.:  : :   :::.                              
XP_011 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPP
           1130      1140      1150      1160      1170      1180  

>>XP_016857327 (OMIM: 606373,616193) PREDICTED: formin-2  (1384 aa)
 initn: 1060 init1: 321 opt: 515  Z-score: 190.1  bits: 45.9 E(85289): 0.00075
Smith-Waterman score: 542; 42.1% identity (52.1% similar) in 240 aa overlap (212-424:922-1152)

             190       200       210       220           230       
pF1KB6 SKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSL----GSGLPPPGM
                                     :  ::::  :.  .  :    :.:.:::  
XP_016 VPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPP--
             900       910       920       930       940           

        240        250          260        270       280           
pF1KB6 PP-PGS-FPPPVPPPGA---LPPGIPPA-MPPPPMPPGAAGHGPPSAGTPGAG------H
       :: ::. .::: : :::   ::: .: : .::::  :::.   ::    ::::       
XP_016 PPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAG--IPPPPPLPGAGIPPPPPL
     950       960       970       980         990      1000       

         290       300        310        320        330       340  
pF1KB6 PGHGHSHPHPFPPGGMPHPG-MSQMQLAHHGP-HGLGHPHAGP-PGSGGQPPPRPPPGMP
       :: :   : :.: .:.: :  .    .    :  : : :   : ::.:  ::: : ::  
XP_016 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP-PLPGAG
      1010      1020      1030      1040      1050      1060       

               350       360       370       380       390         
pF1KB6 HPGPPPM---GMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRG
        : :::.   :.::  :  :. .  : :.:  :.  :::  ::   .: : :::      
XP_016 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI--PPP--PPLPGVGIPPPPPLPGAGI
       1070      1080      1090      1100          1110      1120  

     400           410        420                                  
pF1KB6 PLPPPRP----TPRPPVPPRG-PLRGPLPQ                              
       : ::: :     : ::.:  : :   :::.                              
XP_016 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPP
           1130      1140      1150      1160      1170      1180  

>>XP_016857326 (OMIM: 606373,616193) PREDICTED: formin-2  (1417 aa)
 initn: 1060 init1: 321 opt: 515  Z-score: 190.0  bits: 45.9 E(85289): 0.00076
Smith-Waterman score: 542; 42.1% identity (52.1% similar) in 240 aa overlap (212-424:922-1152)

             190       200       210       220           230       
pF1KB6 SKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSL----GSGLPPPGM
                                     :  ::::  :.  .  :    :.:.:::  
XP_016 VPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPP--
             900       910       920       930       940           

        240        250          260        270       280           
pF1KB6 PP-PGS-FPPPVPPPGA---LPPGIPPA-MPPPPMPPGAAGHGPPSAGTPGAG------H
       :: ::. .::: : :::   ::: .: : .::::  :::.   ::    ::::       
XP_016 PPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAG--IPPPPPLPGAGIPPPPPL
     950       960       970       980         990      1000       

         290       300        310        320        330       340  
pF1KB6 PGHGHSHPHPFPPGGMPHPG-MSQMQLAHHGP-HGLGHPHAGP-PGSGGQPPPRPPPGMP
       :: :   : :.: .:.: :  .    .    :  : : :   : ::.:  ::: : ::  
XP_016 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP-PLPGAG
      1010      1020      1030      1040      1050      1060       

               350       360       370       380       390         
pF1KB6 HPGPPPM---GMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRG
        : :::.   :.::  :  :. .  : :.:  :.  :::  ::   .: : :::      
XP_016 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI--PPP--PPLPGVGIPPPPPLPGAGI
       1070      1080      1090      1100          1110      1120  

     400           410        420                                  
pF1KB6 PLPPPRP----TPRPPVPPRG-PLRGPLPQ                              
       : ::: :     : ::.:  : :   :::.                              
XP_016 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPP
           1130      1140      1150      1160      1170      1180  

>>NP_064450 (OMIM: 606373,616193) formin-2 isoform 2 [Ho  (1722 aa)
 initn: 1060 init1: 321 opt: 515  Z-score: 189.1  bits: 46.0 E(85289): 0.00086
Smith-Waterman score: 542; 42.1% identity (52.1% similar) in 240 aa overlap (212-424:918-1148)

             190       200       210       220           230       
pF1KB6 SKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSL----GSGLPPPGM
                                     :  ::::  :.  .  :    :.:.:::  
NP_064 VPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPP--
       890       900       910       920       930       940       

        240        250          260        270       280           
pF1KB6 PP-PGS-FPPPVPPPGA---LPPGIPPA-MPPPPMPPGAAGHGPPSAGTPGAG------H
       :: ::. .::: : :::   ::: .: : .::::  :::.   ::    ::::       
NP_064 PPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAG--IPPPPPLPGAGIPPPPPL
         950       960       970       980         990      1000   

         290       300        310        320        330       340  
pF1KB6 PGHGHSHPHPFPPGGMPHPG-MSQMQLAHHGP-HGLGHPHAGP-PGSGGQPPPRPPPGMP
       :: :   : :.: .:.: :  .    .    :  : : :   : ::.:  ::: : ::  
NP_064 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP-PLPGAG
          1010      1020      1030      1040      1050       1060  

               350       360       370       380       390         
pF1KB6 HPGPPPM---GMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRG
        : :::.   :.::  :  :. .  : :.:  :.  :::  ::   .: : :::      
NP_064 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI--PPP--PPLPGVGIPPPPPLPGAGI
           1070      1080      1090          1100      1110        

     400           410        420                                  
pF1KB6 PLPPPRP----TPRPPVPPRG-PLRGPLPQ                              
       : ::: :     : ::.:  : :   :::.                              
NP_064 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPP
     1120      1130      1140      1150      1160      1170        

>>NP_001292353 (OMIM: 606373,616193) formin-2 isoform 1   (1726 aa)
 initn: 1060 init1: 321 opt: 515  Z-score: 189.1  bits: 46.0 E(85289): 0.00086
Smith-Waterman score: 542; 42.1% identity (52.1% similar) in 240 aa overlap (212-424:922-1152)

             190       200       210       220           230       
pF1KB6 SKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSL----GSGLPPPGM
                                     :  ::::  :.  .  :    :.:.:::  
NP_001 VPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPP--
             900       910       920       930       940           

        240        250          260        270       280           
pF1KB6 PP-PGS-FPPPVPPPGA---LPPGIPPA-MPPPPMPPGAAGHGPPSAGTPGAG------H
       :: ::. .::: : :::   ::: .: : .::::  :::.   ::    ::::       
NP_001 PPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAG--IPPPPPLPGAGIPPPPPL
     950       960       970       980         990      1000       

         290       300        310        320        330       340  
pF1KB6 PGHGHSHPHPFPPGGMPHPG-MSQMQLAHHGP-HGLGHPHAGP-PGSGGQPPPRPPPGMP
       :: :   : :.: .:.: :  .    .    :  : : :   : ::.:  ::: : ::  
NP_001 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP-PLPGAG
      1010      1020      1030      1040      1050      1060       

               350       360       370       380       390         
pF1KB6 HPGPPPM---GMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRG
        : :::.   :.::  :  :. .  : :.:  :.  :::  ::   .: : :::      
NP_001 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI--PPP--PPLPGVGIPPPPPLPGAGI
       1070      1080      1090      1100          1110      1120  

     400           410        420                                  
pF1KB6 PLPPPRP----TPRPPVPPRG-PLRGPLPQ                              
       : ::: :     : ::.:  : :   :::.                              
NP_001 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPP
           1130      1140      1150      1160      1170      1180  

>>NP_006240 (OMIM: 168840) basic salivary proline-rich p  (309 aa)
 initn: 748 init1: 269 opt: 449  Z-score: 176.1  bits: 41.2 E(85289): 0.0045
Smith-Waterman score: 483; 36.1% identity (50.7% similar) in 274 aa overlap (179-423:35-292)

      150       160       170       180       190       200        
pF1KB6 FASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPH
                                     : ...  . :.  .:  .   : .   :: 
NP_006 LLSVALLALSSAQSLNEDVSQEESPSVISGKPEGRRPQGGNQPQR--TPPPPGKPEGRPP
           10        20        30        40          50        60  

      210             220       230           240              250 
pF1KB6 QLF--ADAPPP----PSAPNPVVSSLGSGLPP-PGMP---PP-----GSFPPPVP--PPG
       :    ...:::    : .: :  .. ..: :: :: :   ::     .. ::: :  : :
NP_006 QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEG
             70        80        90       100       110       120  

             260       270       280       290       300       310 
pF1KB6 ALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQL
         : :   .. ::: :    :  ::..:. . : :      :.:  : : :  : .: : 
NP_006 PPPQGGNQSQGPPPRPGKPEGP-PPQGGNQSQGPP------PRPGKPEGPPPQGGNQSQ-
            130       140        150             160       170     

             320       330                  340       350       360
pF1KB6 AHHGPHGLGHPHAGPPGSGGQ---PPPRP-----PP---GMPHPGPPPMGMPPRGPPFGS
           ::  :.:.. :: .:.:   :::::     ::   :    ::::    :.:::  .
NP_006 -GPPPHP-GKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQG
           180        190       200       210       220       230  

              370       380       390       400       410          
pF1KB6 PMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPP-RGPLR
            :: :::   : :   ::.  . : :::: :  .:: :::  .:. :.::  :  .
NP_006 GNKPQGP-PPHP--GKPQGPPPQEGNKPQRPPPPGRPQGP-PPPGGNPQQPLPPPAGKPQ
             240         250       260        270       280        

     420                    
pF1KB6 GPLPQ                
       :: :                 
NP_006 GPPPPPQGGRPHRPPQGQPPQ
      290       300         




424 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 11:40:24 2016 done: Sat Nov  5 11:40:26 2016
 Total Scan time: 11.610 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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