GENSCAN 1.0	Date run:  6-Nov-116	Time: 02:14:53

Sequence gi568815593f:53380792_53586030 : 205239 bp : 38.81% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  16192  16368  177  0  0   77   42    84 0.101   1.89
 1.02 Intr +  17142  17191   50  2  2  113   68    69 0.207   3.96
 1.03 Intr +  18729  18810   82  0  1   86   61    77 0.205   3.52
 1.04 Intr +  21707  21773   67  1  1   73   82    30 0.178  -1.54
 1.05 Intr +  33235  33442  208  2  1   51   38   189 0.013   7.41
 1.06 Intr +  37009  37123  115  1  1   26  108    59 0.142   1.23
 1.07 Intr +  64770  64949  180  2  0   65   59    77 0.022   1.64
 1.08 Intr +  69928  70094  167  0  2   54   44   116 0.010   1.64
 1.09 Term +  85057  85153   97  1  1  104   42    89 0.483   2.36
 1.10 PlyA +  86786  86791    6                               1.05

 2.00 Prom +  98627  98666   40                              -3.55
 2.01 Init + 100001 100085   85  1  1   79   98   222 0.999  21.33
 2.02 Intr + 102089 102280  192  0  0  129   97   171 0.999  20.64
 2.03 Intr + 102713 102931  219  0  0   87   56   213 0.993  15.35
 2.04 Intr + 103278 103502  225  1  0   83   39   127 0.878   4.33
 2.05 Intr + 104206 104436  231  2  0   48   93   223 0.711  15.62
 2.06 Term + 105160 105242   83  2  2   64   37   130 0.857   2.38
 2.07 PlyA + 106301 106306    6                               1.05

 3.00 Prom + 112633 112672   40                              -3.25
 3.01 Sngl + 115251 116591 1341  2  0   44   38   516 0.597  38.06
 3.02 PlyA + 116694 116699    6                               1.05

 4.00 Prom + 117144 117183   40                             -10.75
 4.01 Sngl + 117219 118088  870  2  0   60   38   221 0.694   9.97
 4.02 PlyA + 118985 118990    6                               1.05

 5.02 PlyA - 119138 119133    6                               1.05
 5.01 Sngl - 131465 130728  738  2  0   63   49   299 0.976  19.46
 5.00 Prom - 140998 140959   40                              -5.35

 6.04 PlyA - 142251 142246    6                               1.05
 6.03 Term - 180272 179846  427  1  1   -2   48   315 0.685  12.29
 6.02 Intr - 182666 182617   50  2  2   71   89    39 0.313  -1.14
 6.01 Init - 194541 194455   87  0  0   61   73    97 0.480   6.19
 6.00 Prom - 202398 202359   40                              -2.65


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  53304  53145  160  0  1   70   34   175 0.929  10.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:53380792_53586030|GENSCAN_predicted_peptide_1|380_aa
AQGLFNQLMEKAARPETLPSGQWAPFWLRAGPEMLSKSQSLESGTSRAHLLLYLTVAELQ
RKESPPELQAVLPGVGEKRGHFEGDLSSPLTLTFCFKLVSEGQCRDSLKSDCPAKDYVFR
SSLQLGDAGVDSMTKIYAGHQSKSVMPSHFSRGSKRMARWVLQAQEGLKMVEKDQDGGCK
VTPQGREIWTESPDSTGKGADFGAFQILDFQIWDARPVLVSCFKLPFQCIGLQRKRKNRN
FTVGKRKYLMDMGFIASYASDLKMLMLNSPTKIKTPTKLFQLQHLWLQVLFQKMFCPLPE
KDHLVTKLFFSQFHDTVASSVGQMGCHVTVKQPQEHRIMNNSTPGEIHRTQGWSLCSTRS
AETKSTSFPEIVRTGKGSTQ

>gi568815593f:53380792_53586030|GENSCAN_predicted_CDS_1|1143_bp
gcccaggggcttttcaatcagcttatggagaaggctgccaggcctgagactctcccttca
gggcagtgggctcccttctggctcagggcaggtccagaaatgctgtccaagagccaaagc
ctggaatcagggacttcaagggcccacttgttgctttacctcactgtggctgagctgcaa
aggaaggagtctcccccggagctgcaagctgtattgcctggggttggcgagaaacgaggt
cactttgaaggcgacctaagcagccccctaactctcacattttgctttaaattggtgtca
gagggtcagtgtagagattctttgaaaagtgactgcccagctaaggactacgttttccgg
tcttctctacaactaggtgatgctggggttgactccatgaccaagatctatgcgggacat
cagagtaaaagcgtcatgcccagccacttcagccgaggctccaagagaatggcccgctgg
gtcctccaagcccaggaggggctgaaaatggtggaaaaggaccaagatgggggctgcaaa
gtgacacctcagggacgagagatctggacagaatcaccagacagcactggaaaaggtgca
gattttggagcatttcagattttagattttcagatttgggatgctcgacctgtacttgta
agctgcttcaaactccctttccaatgcattggtctacaaagaaaaagaaagaacagaaac
ttcacagttgggaaaagaaaatacctcatggatatgggttttattgcaagctatgcatct
gacttaaagatgttaatgctgaattcgcccaccaagatcaaaactcctacaaaactcttc
cagctgcagcatttatggctccaggttttgtttcagaaaatgttttgtcctctgccagag
aaagatcatctagtcaccaagttgtttttctcacagttccatgacactgtggcatcatct
gtgggccaaatgggctgccatgtgacagtgaagcagcctcaggagcatagaataatgaac
aactcaacccctggggaaatccacagaacccaaggttggagcctctgtagcactcgatct
gcagaaaccaagtctacttcctttcctgagatagtccgaacaggaaaaggaagcacacag
tag

>gi568815593f:53380792_53586030|GENSCAN_predicted_peptide_2|344_aa
MVRARHQPGGLCLLLLLLCQFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGR
LSTSWTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAP
DCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSSTCV
VDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCI
KAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSDEPVCASDNATYASECAMKEA
ACSSGVLLEVKHSGSCNSISEDTEEEEEDEDQDYSFPISSILEW

>gi568815593f:53380792_53586030|GENSCAN_predicted_CDS_2|1035_bp
atggtccgcgcgaggcaccagccgggtgggctttgcctcctgctgctgctgctctgccag
ttcatggaggaccgcagtgcccaggctgggaactgctggctccgtcaagcgaagaacggc
cgctgccaggtcctgtacaagaccgaactgagcaaggaggagtgctgcagcaccggccgg
ctgagcacctcgtggaccgaggaggacgtgaatgacaacacactcttcaagtggatgatt
ttcaacgggggcgcccccaactgcatcccctgtaaagaaacgtgtgagaacgtggactgt
ggacctgggaaaaaatgccgaatgaacaagaagaacaaaccccgctgcgtctgcgccccg
gattgttccaacatcacctggaagggtccagtctgcgggctggatgggaaaacctaccgc
aatgaatgtgcactcctaaaggcaagatgtaaagagcagccagaactggaagtccagtac
caaggcagatgtaaaaagacttgtcgggatgttttctgtccaggcagctccacatgtgtg
gtggaccagaccaataatgcctactgtgtgacctgtaatcggatttgcccagagcctgct
tcctctgagcaatatctctgtgggaatgatggagtcacctactccagtgcctgccacctg
agaaaggctacctgcctgctgggcagatctattggattagcctatgagggaaagtgtatc
aaagcaaagtcctgtgaagatatccagtgcactggtgggaaaaaatgtttatgggatttc
aaggttgggagaggccggtgttccctctgtgatgagctgtgccctgacagtaagtcggat
gagcctgtctgtgccagtgacaatgccacttatgccagcgagtgtgccatgaaggaagct
gcctgctcctcaggtgtgctactggaagtaaagcactccggatcttgcaactccatttcg
gaagacaccgaggaagaggaggaagatgaagaccaggactacagctttcctatatcttct
attctagagtggtaa

>gi568815593f:53380792_53586030|GENSCAN_predicted_peptide_3|446_aa
MVKGSIQQEELTILNIYAPNTGEPRFIKQVLKDLQRDLDSHTIIMGDFNTPLSTLDRSTR
QKLNEDIQELNSALHQVDLIDIYRTLYPKSTEYTFFSVPQHTYSKIDHIVGSKALLSKCK
RTEIVTNCLSDHSAIKLELRIKKLPQNHSTIWKLNNLLLNDYCVHNEMKAEIKMFFETNE
NKDTTYQNLWDTFKSLCRGKFIALNAHKRKQERSKIDTLTSQLKEVEKQEQTHSKASRRQ
EINKIRAELKEIETQKTLQKINESRSWFFEKINKIERLLARPIKNKREKNQTDTIKNDKG
DITTDPTEIQTTIRKYYKHVYANKFENLEEMDKFLDTYTLSRLNQEEVESLNRPITGSEI
ETIINSLPTKKSLGPDGFTAEFCQRYKEELIPFLLKLFQSIEKEGILPNSFYEASIILIP
KPGRDTTKKREFYTNIPDEHRCKNPQ

>gi568815593f:53380792_53586030|GENSCAN_predicted_CDS_3|1341_bp
atggtaaagggatcaattcaacaagaagagctgactatcctaaatatatatgcacccaat
acaggagaacccagattcataaagcaagtccttaaagacctacaaagagacttagactcc
cacacaataataatgggagactttaacaccccactgtcaacattagacagatcaacgaga
cagaaacttaatgaggatatccaggaattgaactcagctttgcaccaagtggacctaata
gatatctacagaactctctaccccaaatcaacagaatatacattcttctcagtaccacaa
cacacttattccaaaattgaccacatagttggaagtaaagcactcctcagcaaatgtaaa
agaacagaaattgtaacaaactgtctctcagaccacagtgcaatcaaactagagctcagg
attaagaaactccctcaaaaccactcaactatatggaaactgaacaacctgctcctgaat
gactactgtgtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgag
aacaaagacacaacataccagaatctctgggacacatttaaatcattgtgtagagggaaa
tttatagcactaaatgcccacaagagaaagcaggaaagatctaaaattgacaccctaaca
tcacaattaaaagaagtagagaagcaagagcaaacacattcaaaagctagcagaaggcaa
gaaataaataagatcagagcagaactgaaggagatagagacacaaaaaacccttcaaaaa
atcaatgaatccaggagctggttttttgagaagatcaacaaaattgaaagactgctagca
agaccaataaagaacaaaagagagaagaatcaaacagacacaataaaaaatgataaaggg
gatatcaccaccgatcccacagaaatacaaactaccatcagaaaatactataaacacgtc
tacgcaaataaatttgaaaatctagaagaaatggataaattcctggacacatacaccctc
tcaagactaaaccaggaagaagtagaatctctgaatagaccaataacaggctctgaaatt
gagacaatcattaatagcttaccaaccaaaaaaagtctaggaccagatggattcacagcc
gaattctgccagaggtacaaggaggagctgataccattccttctgaaactattccaatca
atagaaaaagagggaatcctccctaactcattttatgaggccagcatcatcttgatacca
aagcctggcagagacacaacaaaaaaaagagaattttacaccaatatccctgatgaacat
cgatgcaaaaatcctcaataa

>gi568815593f:53380792_53586030|GENSCAN_predicted_peptide_4|289_aa
MSDLPFTIASKRIKYLGIQFTRDVKDLFKENYKPLLNEIKEDTKKWKNIPCSWVGRINIV
KMAIPPKVIYRFNAIPIKLPMTFFKELEKTTLKLIWNQKRACIAKSILSKKNKAEGITLP
DFKLYYKATVTKIAWYWHQNRDIDQWNRTEAPEIMPHIYNYLIFDKPDKNKKWGKNSLFN
KSCQENWLAICRKLKLDPFLTPYTKINTRWIKDLNVRPKTIETLEENLGNTIQDIGMGKD
FTAKTPKAMATKAKIDKWDLIKLKSFCTAKETTMRVNRQPTEWEKIFAI

>gi568815593f:53380792_53586030|GENSCAN_predicted_CDS_4|870_bp
atgagtgacctcccattcacaattgcttcaaagagaataaaatacctaggaatccaattt
acaagggacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaaaaaatggaagaacattccatgctcatgggtaggaagaatcaatattgtg
aaaatggccataccacccaaggtaatttatagattcaatgccatccccatcaagctacca
atgactttcttcaaagaattggaaaaaactactttaaagttaatatggaaccaaaaaaga
gcctgcatagccaagtcaatcctaagcaaaaagaacaaagctgaaggcatcacactacct
gacttcaaactatactacaaggctacagtaaccaaaatagcatggtactggcaccaaaac
agagatatagaccaatggaacagaacagaggcgccagaaataatgcctcatatctacaac
tatctgatctttgacaaacctgacaaaaataagaaatggggaaagaattccctatttaat
aaatcgtgccaggaaaattggctagccatatgtagaaagctgaaactggatcccttcctt
acaccttatacaaaaattaatacaagatggattaaagacttaaatgttagacctaaaacc
atagaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggac
ttcacagctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaactaaagagcttctgcacagcaaaagaaactaccatgagagtgaacaggcaacct
acagaatgggagaaaatttttgcaatctag

>gi568815593f:53380792_53586030|GENSCAN_predicted_peptide_5|245_aa
MTLLSKLNKTPVTSSGEREICDLSDEKSKIAVLRKLKEIQDNTEKGFRILSEKFNEENEI
VKNNKAEILELKNATDILKNASKSFNSRIVQAEGRTSELEQRLFENTQSGKTKEKRIKKN
EACLKDLENSFKRANLRVIGLRKEVEKEIGVESLFKGVIAENFPNLEKDNNVQVQDGYRT
PSRFNPKENIKPLNKLLKVKDKENILKQQEKRNKLHMKELQYIWQQTFQWKCYRPGESGM
TYLKC

>gi568815593f:53380792_53586030|GENSCAN_predicted_CDS_5|738_bp
atgaccttgctaagcaaactaaataaaacaccagtgaccagttctggagaaagagaaata
tgtgatctttcagacgaaaaatccaaaatagctgttttgaggaaactcaaagaaattcaa
gataacacagagaagggattcagaattctatcagaaaaatttaatgaagagaatgaaata
gttaaaaataataaagcagaaattctggagttgaaaaatgcaactgacatactgaagaat
gcatccaagtcttttaatagcagaattgttcaagcagaaggaagaactagtgagcttgaa
cagaggctatttgaaaatacacagtcagggaagacaaaagaaaaaagaataaaaaagaac
gaagcatgtctgaaagatctagaaaacagcttcaaaagggcaaatctaagagttattggt
cttagaaaggaggtagaaaaagagataggggtagaaagtttattcaaaggggtcatagca
gagaactttccaaacctagaaaaagataacaatgtccaagtacaagatggttatagaaca
ccaagcagatttaatccaaaagagaacatcaagccattaaataaactcctaaaagtcaag
gataaagaaaacatcctaaaacagcaagagaaaaggaacaaattacatatgaaggagctc
caatatatctggcaacagacttttcagtggaaatgttacaggccaggagaaagtggcatg
acatatttaaagtgctga

>gi568815593f:53380792_53586030|GENSCAN_predicted_peptide_6|187_aa
MEQLFEGSEKEIAGRSGKIIRTQRTTELAGNEKHMETETNTTAQAQAKVQLAAPEAKPPR
TLSLSDKPNTKASRKPQVLLPGLALTPSLAWPTPIDSRQSLVRPTSPEKRVNRGRLPRGL
LRNSASRDSAKMEGPKKLEEKCENSITWSEPWKRKGQLQPLPFSATTSASVPLTLTPPPS
CCRQTPG

>gi568815593f:53380792_53586030|GENSCAN_predicted_CDS_6|564_bp
atggagcagctgtttgaaggctctgaaaaggaaatagcaggcagatcagggaagatcatc
agaactcaaaggaccactgaactagcaggaaatgagaagcacatggaaactgagaccaac
actacagcacaagctcaggctaaggttcagcttgcagctccggaggcaaaacctccacgg
accctctccctcagcgacaagccgaatacgaaagcttccagaaaaccacaggtcctcctc
cccggcctcgcactcacgccctcactcgcctggccaacgcccattgatagcagacagtcc
ctagtccgcccgacttctcccgagaaaagggtcaacagaggacgccttccccgaggcctc
ctccggaactcagccagcagagactccgcaaaaatggagggacccaagaagcttgaagaa
aagtgtgaaaattctattacctggtcggaaccctggaaacggaaagggcagctacagcca
ctgcccttctccgccacaacgtctgcctcagtaccactgacattgacaccgccgccatct
tgctgcaggcaaacgccaggatga