GENSCAN 1.0	Date run:  6-Nov-116	Time: 02:08:18

Sequence gi568815577f:17413130_17665689 : 252560 bp : 40.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   2051   2175  125  0  2  129   43   107 0.968   7.87
 1.02 PlyA +   2461   2466    6                               1.05

 2.03 PlyA -   3095   3090    6                               1.05
 2.02 Term -   9222   9144   79  2  1   84   43    46 0.424  -4.04
 2.01 Init -  12968  12850  119  2  2   81  111    78 0.827   9.12
 2.00 Prom -  29813  29774   40                              -2.95

 3.04 PlyA -  31111  31106    6                               1.05
 3.03 Term -  36191  36141   51  2  0   58   33   113 0.425  -0.75
 3.02 Intr -  41803  41621  183  1  0   63  103    45 0.332   2.56
 3.01 Init -  57589  57536   54  1  0   86   83    64 0.572   5.03
 3.00 Prom -  61454  61415   40                              -4.15

 4.00 Prom +  78387  78426   40                              -4.55
 4.01 Init + 100001 100043   43  1  1  129   92   102 0.995  13.40
 4.02 Term + 100425 100561  137  1  2   85   49   112 0.851   4.20
 4.03 PlyA + 102153 102158    6                               1.05

 5.02 PlyA - 102360 102355    6                               1.05
 5.01 Sngl - 105864 105361  504  0  0   67   47   587 0.736  48.29
 5.00 Prom - 122382 122343   40                              -3.95

 6.00 Prom + 123121 123160   40                              -9.45
 6.01 Init + 125213 125262   50  1  2   86   83    47 0.667   4.47
 6.02 Intr + 125932 126011   80  1  2  121   36    70 0.917   3.38
 6.03 Intr + 133898 134064  167  0  2   90  103   197 0.965  20.16
 6.04 Intr + 138620 138824  205  1  1   70  111   134 0.997  11.75
 6.05 Intr + 145847 146002  156  0  0  102   84   100 0.990  10.06
 6.06 Intr + 147573 147695  123  1  0  107   99   100 0.999  12.64
 6.07 Intr + 148209 148347  139  1  1   61   91    88 0.941   5.00
 6.08 Intr + 152299 152482  184  1  1   79   65   153 0.140  10.97
 6.09 Term + 169614 169775  162  2  0   59   35    89 0.061  -2.35
 6.10 PlyA + 170272 170277    6                               1.05

 7.02 PlyA - 171207 171202    6                               1.05
 7.01 Sngl - 175389 174436  954  0  0   60   49   262 0.981  15.86
 7.00 Prom - 180507 180468   40                              -6.35

 8.14 PlyA - 180547 180542    6                               1.05
 8.13 Term - 181203 180964  240  0  0  125   32   103 0.984   3.44
 8.12 Intr - 185695 185488  208  0  1   59   91   272 0.994  22.76
 8.11 Intr - 191868 191731  138  2  0   74  109   116 0.998  10.96
 8.10 Intr - 196023 195843  181  1  1   70  103   142 0.294  11.90
 8.09 Intr - 199743 199570  174  1  0   67   77   143 0.275  10.09
 8.08 Intr - 206836 206619  218  0  2   26   57   132 0.485   1.12
 8.07 Intr - 219187 219074  114  0  0  100   29    83 0.057   2.24
 8.06 Intr - 221006 220895  112  0  1   99   53    27 0.215  -1.18
 8.05 Intr - 223844 223751   94  2  1   50   56   105 0.153   2.12
 8.04 Intr - 228015 227818  198  0  0   24   20   179 0.267   3.33
 8.03 Intr - 245392 245344   49  0  1   89   72    54 0.499   1.66
 8.02 Intr - 245646 245470  177  2  0   57  101    92 0.649   5.51
 8.01 Init - 251572 251472  101  1  2   59  107    65 0.578   5.28

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577f:17413130_17665689|GENSCAN_predicted_peptide_1|41_aa
XNEIFRALKFSQTPQAAAPLFLRVPVAIPTCLYGSTSHTVL

>gi568815577f:17413130_17665689|GENSCAN_predicted_CDS_1|126_bp
ngaaatgaaatattccgtgctctgaagttttcccagacacctcaagcagcagctcctctg
ttcctccgtgttcctgtagcaattcccacctgcctctatggaagtacttctcacactgtt
ctgtga

>gi568815577f:17413130_17665689|GENSCAN_predicted_peptide_2|65_aa
MAECGETAGNRELHNKPAMGLFLNILVIGGPKSGEKHWLRRIIQTLPTGYIDILVLASSD
TMHFC

>gi568815577f:17413130_17665689|GENSCAN_predicted_CDS_2|198_bp
atggcagaatgtggagaaacagctgggaacagagaactccacaacaaacctgcaatgggt
cttttcctaaatatattagtgataggtggccctaaaagtggagagaaacactggctcaga
agaattattcaaactctccctactggatatatagacatccttgtgcttgccagcagtgat
accatgcacttctgctag

>gi568815577f:17413130_17665689|GENSCAN_predicted_peptide_3|95_aa
MGRARWLMPAIPALWEAESLATKNTFQSRSNHVTAFPQLFYRCMGGSVVEFSPATREARV
RFPAHAARKCVLDRAREVALNGIAPPHLLREPVRH

>gi568815577f:17413130_17665689|GENSCAN_predicted_CDS_3|288_bp
atgggccgggcgaggtggctgatgcctgcaatcccagcactttgggaggccgagtctctt
gcaacaaagaacaccttccagtcgcgttccaatcatgttactgcttttccccaactcttc
tatcggtgcatgggtggttcagtggtagaattctcgcctgccacgcgggaggcccgggtt
cgattcccggcccatgcagcacgaaaatgtgttttggaccgtgcgcgggaggttgcgctt
aatggaattgctccacctcaccttttacgagaaccagtacgacattag

>gi568815577f:17413130_17665689|GENSCAN_predicted_peptide_4|59_aa
MALLLCFVLLCGVVALPDFKNLGRRVFRCRVAQAGRLNCKRHYSMDMELPGASDRPGYL

>gi568815577f:17413130_17665689|GENSCAN_predicted_CDS_4|180_bp
atggcgctcctgctgtgcttcgtgctcctgtgcggagtagtggcgttacccgatttcaaa
aaccttgggcggcgagttttcaggtgtcgagtcgcccaggcggggaggctgaattgcaaa
cgccattattcaatggacatggagctgcccggtgcctcggatcggccaggctacctctag

>gi568815577f:17413130_17665689|GENSCAN_predicted_peptide_5|167_aa
MNQEKLAKLQAQVRIGGKGTARRKKVVHKTAMADDKKLQSSLKKLAVNNIVGIEEMNMIK
DDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMIPGILSQLGADSLTSLRKLAEQFP
RQVLDSKAAKPEDTDEEDDDVPDLVENFDEASKNEAGMVFGSWHGLD

>gi568815577f:17413130_17665689|GENSCAN_predicted_CDS_5|504_bp
atgaatcaagaaaagttagccaaacttcaggctcaggtccggatagggggcaagggtaca
gctcgcagaaagaaggtggtacataaaacagccatggctgatgacaaaaagcttcagagt
tctctaaaaaaactggctgtgaataatatagttggtattgaagagatgaacatgattaaa
gatgatgggacagttattcacttcaacaatcccaaagtccaagcttccctttctgctaac
acctttgcaattactggtcatgcagaagccaaaccaatcacagaaatgatacctggaata
ttaagtcagcttggtgctgacagtttaacaagccttaggaagttagctgaacagttccca
cggcaagtcttggacagtaaagcagcaaaaccagaagacactgatgaggaggatgatgat
gttcccgatcttgtagaaaattttgatgaggcatcaaagaatgaagctggcatggttttt
ggaagctggcatggactagattga

>gi568815577f:17413130_17665689|GENSCAN_predicted_peptide_6|421_aa
MMMEMMMAVLYCGSGKWFVQMIGDAAISCICDLMQGLIAKSVGNFARSLSITTPEEMIEK
AKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRV
HFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLVKPSGARCYVDGS
EEIGSDFKIKCEPKEGSLPLQYEWQKLSDSQKMPTSWLAEMTSSVISVKNASSEYSGTYS
CTVRNRVGSDQCLLRLNVVPPSNKAGLIAGAIIGTLLALALIGLIIFCCRKKRREEKYEK
EVHHDIREDVPPPKSRTSTARSYIGSNHSSLGSMSPSNMEGYSKTQYNQVPSEDFERTPQ
SPTLPPAKLSEFLPRAVLWNQHKLMKKVSYLAFEKMCLGYILGQLSHTIPSSMLAAGTVL
F

>gi568815577f:17413130_17665689|GENSCAN_predicted_CDS_6|1266_bp
atgatgatggagatgatgatggctgtattatactgtgggagtgggaagtggtttgtgcag
atgattggtgatgcagctatttcttgcatctgtgatcttatgcagggattgattgccaaa
agtgttggtaatttcgccagaagtttgagtatcactactcctgaagagatgattgaaaaa
gccaaaggggaaactgcctatctgccatgcaaatttacgcttagtcccgaagaccaggga
ccgctggacatcgagtggctgatatcaccagctgataatcagaaggtggatcaagtgatt
attttatattctggagacaaaatttatgatgactactatccagatctgaaaggccgagta
cattttacgagtaatgatctcaaatctggtgatgcatcaataaatgtaacgaatttacaa
ctgtcagatattggcacatatcagtgcaaagtgaaaaaagctcctggtgttgcaaataag
aagattcatctggtagttcttgttaagccttcaggtgcgagatgttacgttgatggatct
gaagaaattggaagtgactttaagataaaatgtgaaccaaaagaaggttcacttccatta
cagtatgagtggcaaaaattgtctgactcacagaaaatgcccacttcatggttagcagaa
atgacttcatctgttatatctgtaaaaaatgcctcttctgagtactctgggacatacagc
tgtacagtcagaaacagagtgggctctgatcagtgcctgttgcgtctaaacgttgtccct
ccttcaaataaagctggactaattgcaggagccattataggaactttgcttgctctagcg
ctcattggtcttatcatcttttgctgtcgtaaaaagcgcagagaagaaaaatatgaaaag
gaagttcatcacgatatcagggaagatgtgccacctccaaagagccgtacgtccactgcc
agaagctacatcggcagtaatcattcatccctggggtccatgtctccttccaacatggaa
ggatattccaagactcagtataaccaagtaccaagtgaagactttgaacgcactcctcag
agtccgactctcccacctgctaagttgtcggaatttttgccaagagcagttttatggaat
cagcacaaactaatgaagaaagtgagttatcttgcatttgaaaagatgtgtctaggttac
atcttaggtcagctgtcacacactatcccaagttcaatgttggctgctggcactgtgctc
ttttaa

>gi568815577f:17413130_17665689|GENSCAN_predicted_peptide_7|317_aa
MSELPFTIASKRIKYLRIQPTRDVKDLFKENYKPLLNEIKEDTNKRKNIPCSWVGRINIV
KMAILPKAIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIANSILSQKNKAGGITLP
DFKLHYKPTVTKTAWYWCQNRDINQSNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFN
KWCWENWLAIYRKLKLDPFLTPYTKINSRWIKDLHVRPKTITLEENLGNTIQDIGMGKDF
MSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWENIFATYSPDKGLISRIY
NELQQIYKKKTTPSKSG

>gi568815577f:17413130_17665689|GENSCAN_predicted_CDS_7|954_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctacgaatccaacct
acaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaacaaacggaagaacattccatgctcatgggtaggaagaatcaatatcgtg
aaaatggccatactgcccaaggcaatttatagattcaatgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcccgcattgccaactcaatcctaagccaaaagaacaaagctggaggcatcacactacct
gacttcaaactacactacaagcctacagtaaccaaaacagcatggtattggtgccaaaac
agagatataaaccaatcgaacagaacagagccctcagaaataacgccacatatctacaac
tatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaat
aaatggtgctgggaaaactggctagccatatatagaaagctgaaactggatcccttcctt
acaccttatacaaaaattaattcaagatggattaaagacttacatgttagacctaaaacc
ataaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
gaatgggagaatatttttgcaacctactcacctgacaaagggctaatatccagaatctac
aatgaactccaacaaatttacaagaaaaaaacaaccccatcgaaaagtgggtga

>gi568815577f:17413130_17665689|GENSCAN_predicted_peptide_8|667_aa
MNKAAKNICAGFCVDSSFQLIWVNIKEYDCWIIRNILEDWWALKVLSMGLDWVHPWRLRD
EPPSLFCKKSQFTVRKQGAEINHTIPEKVQAEIYSLKYNGLMPNPVNMEDFELESDDLVY
LVEEISKQQSIHDVAWLLLVAFVYICEQRNDLKSELIFTREAEHKSLENLEPDHVMPSSC
IEEPVKVFQALSQWSHQLTAKINSQTYYAISPNDLLIFTSVCEAILRYKLHIANENFRAS
LTLLHFHSGFNLNTDYKTLQTLGEKCEFCQLRMVHSESLTMCLIQSKPLTLFNSTKAERG
EAVADEKLEAIRGWSMRFMEKSHLHNIKVQGEAVNADRETEAIYPEDLAKNMVEVLSTRA
WPPDDAGAARAGRGSLRSLLPSAGPLRRSPQFPARTRSGPPNLRPKSGGGSGGKKMKNEI
AAVVFFFTRLVRKHDKLKKEAVERFAEKLTLILQEKYKNHWYPEKPSKGQAYRCIRVNKF
QRVDPDVLKACENSCILYSDLGLPKELTLWVDPCEVCCRYGEKNNAFIVASFENKDENKD
EISRKVTRALDKVTSDYHSGSSSSDEETSKEMEVKPSSVTAAASPVYQISELIFPPLPMW
HPLPRKKPGMYRGNGHQNHYPPPVPFGYPNQGRKNKPYRPIPVTWVPPPGMHCDRNHWIN
PHMLAPH

>gi568815577f:17413130_17665689|GENSCAN_predicted_CDS_8|2004_bp
atgaataaagctgctaaaaacatctgtgcaggtttttgtgtggacagcagttttcaactc
atttgggtaaacatcaaggaatatgattgttggatcatacgaaacattctcgaagactgg
tgggctttgaaggttctaagcatgggccttgactgggtccacccgtggcgtttaagagat
gagccgccatctttattttgcaagaaaagtcagtttacagttagaaaacaaggagcagaa
ataaatcataccattccagaaaaggtacaagctgaaatatattcccttaaatataatggg
cttatgcccaatcccgtgaacatggaggactttgaacttgagagtgatgatttagtgtat
ctggtggaagaaatttctaagcagcaaagcattcacgatgtggcctggttgcttctagta
gcctttgtttatatttgtgagcaaagaaatgacctgaaatcggaacttatatttacaagg
gaagcagagcataaaagtttggaaaatttggagcctgaccatgtgatgccaagcagctgc
atagaggagccagtgaaggtgttccaggcactgtcccagtggagccatcagctaacagcc
aaaatcaactcccagacatactatgccatcagcccaaatgacctgctaatctttaccagt
gtatgtgaggctattctgagatataagcttcacatagctaatgaaaacttcagagctagt
ctcacgttgttacattttcactcaggcttcaatcttaacacagactataaaacccttcaa
actcttggggagaagtgtgaattttgtcaactgcgaatggtccactctgaatctctcact
atgtgcctaatccagagcaagcccctaactctcttcaattctaccaaggctgagagaggt
gaggcagttgcagatgaaaagttggaagctatcagaggttggtccatgaggtttatggaa
aaaagccatctccataacataaaagtgcaaggcgaagcagtaaatgctgatagagaaact
gaagcaatttatccagaagatctagctaagaacatggttgaagtcctctcaacgcgcgct
tggccgcccgacgacgcgggagccgcacgcgccggacgaggctcgctgcgctccctgttg
cccagcgcgggcccgttgaggcggagccctcagttcccggccaggacacggtctgggccg
ccgaatctccggccgaagagcggcggcggcagcggcgggaaaaaaatgaagaatgaaatt
gctgccgttgtcttctttttcacaaggctagttcgaaaacatgataagttgaaaaaagag
gcagttgagaggtttgctgagaaattgaccctaatacttcaagaaaaatataaaaatcac
tggtatccagaaaaaccatcgaaaggacaggcctacagatgtattcgtgtcaataaattt
cagagagttgatcctgatgtcctgaaagcctgtgaaaacagctgcatcttgtatagtgac
ctgggcttgccaaaggagctcactctctgggtggacccatgtgaggtgtgctgtcggtat
ggagagaaaaacaatgcattcattgttgccagctttgaaaataaagatgagaacaaggat
gagatctccaggaaagttaccagggcccttgataaggttacctctgattatcattcagga
tcctcttcttcagatgaagaaacaagtaaggaaatggaagtgaaacccagttcggtgact
gcagccgcaagtcctgtgtaccagatttcagaacttatatttccacctcttccaatgtgg
caccctttgcccagaaaaaagccaggaatgtatcgagggaatggccatcagaatcactat
cctcctcctgttccatttggttatccaaatcagggaagaaaaaataaaccatatcgccca
attccagtgacatgggtacctcctcctggaatgcattgtgaccggaatcactggattaat
cctcacatgttagcacctcactaa