GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:46:50

Sequence gi568815577f:33166466_33396354 : 229889 bp : 43.99% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1043   1038    6                               1.05
 1.03 Term -  25222  24661  562  0  1  -71   32   545 0.675  26.85
 1.02 Intr -  28958  28846  113  2  2   77  109    96 0.946   9.78
 1.01 Init -  30747  30589  159  0  0   62   38   102 0.306   2.42
 1.00 Prom -  62131  62092   40                              -3.56

 2.00 Prom +  62850  62889   40                              -2.86
 2.01 Init +  75458  75512   55  1  1   76  106     3 0.895   2.42
 2.02 Intr +  77208  77249   42  1  0  110   99    22 0.909   3.71
 2.03 Intr +  78486  78609  124  1  1  110   73   -17 0.922  -1.36
 2.04 Intr +  80253  80425  173  0  2   58   79   132 0.980   8.89
 2.05 Intr +  82244  82389  146  0  2   82  115   130 0.996  15.10
 2.06 Intr +  86197  86365  169  0  1   95   91    64 0.995   6.92
 2.07 Intr +  88210  88442  233  2  2   37   55   148 0.923   3.89
 2.08 Intr +  90721  90831  111  0  0   38   93    78 0.641   3.88
 2.09 Term +  96328  97035  708  0  0  116   41   331 0.541  24.71
 2.10 PlyA +  97715  97720    6                               1.05

 3.00 Prom +  98571  98610   40                             -10.35
 3.01 Init + 100001 100049   49  1  1   75   94    67 0.638   5.14
 3.02 Intr + 101929 102052  124  2  1   56   98    35 0.537   0.94
 3.03 Intr + 110137 110288  152  1  2   48   72    78 0.365   2.01
 3.04 Intr + 113287 113453  167  2  2   64  116    99 0.951   9.98
 3.05 Intr + 116629 116776  148  0  1   65  115    56 0.775   5.81
 3.06 Intr + 121639 121796  158  2  2   46   92   119 0.053   7.83
 3.07 Intr + 129719 129842  124  1  1  123   21    99 0.964   6.86
 3.08 Intr + 132226 132469  244  2  1   25   80   169 0.531   6.36
 3.09 Intr + 133479 133501   23  0  2  121   62   -26 0.262  -4.71
 3.10 Intr + 135617 135732  116  0  2   68   72    74 0.629   3.97
 3.11 Term + 141720 141857  138  2  0  132   41    48 0.823   2.46
 3.12 PlyA + 142405 142410    6                               1.05

 4.00 Prom + 144794 144833   40                              -5.86
 4.01 Init + 158591 158666   76  1  1   49   94   190 0.501  14.95
 4.02 Intr + 158757 158983  227  1  2  -12   30   182 0.671   0.10
 4.03 Intr + 168253 168468  216  0  0   61   33   153 0.348   5.80
 4.04 Intr + 171531 171616   86  2  2   24  102    56 0.368  -0.78
 4.05 Intr + 174534 174709  176  0  2   85  116    29 0.761   4.98
 4.06 Intr + 176803 176957  155  2  2   81   74    42 0.417   1.89
 4.07 Term + 188851 189084  234  0  0   54   47   176 0.684   6.42
 4.08 PlyA + 193328 193333    6                               1.05

 5.03 PlyA - 194403 194398    6                               1.05
 5.02 Term - 202404 202257  148  2  1   68   53   134 0.604   5.27
 5.01 Intr - 216920 216707  214  0  1   70   69   130 0.248   7.07

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577f:33166466_33396354|GENSCAN_predicted_peptide_1|277_aa
MSIRIDLNPAADSQVCDRIPEDCGGRVSVDQGKSLLPEKHLHGQLSYGYYDLKDSLCYIG
ITWERGRATESWAPPWTYLIVILFIGVPFASNQPTNEPANQPSNQPTKQSTNQPTNQPTN
QPTNQRTNEPSKQQSKQATNQPTKQPTNQPTKQPNNQPTNQPSNQATNQATNQPTNQATN
QATNQASNEASNQATNEASNQATNEASNQASKQPTNQATNQPTSQASKQASKQASKQATN
QPTKQPSKQPSNQPTKQPSNQPSNQRTNQPSNQSTNK

>gi568815577f:33166466_33396354|GENSCAN_predicted_CDS_1|834_bp
atgtccatacgcattgatcttaacccagcggcagactcacaagtgtgtgaccgcatccca
gaggactgcgggggaagggtttctgtggatcagggcaaatcgctcctgccggagaagcac
cttcacggtcagctctcttatggttattatgacctgaaggactctctttgctacatcggc
atcacctgggaacgtggtagggctacagaatcttgggccccaccttggacctacctaatc
gtcatcttattcattggtgttcccttcgccagcaaccaaccaaccaatgaaccagccaac
caaccaagcaaccaaccaaccaagcaatcaacgaaccaaccaaccaaccaaccaaccaac
caaccaaccaaccaacgaaccaacgaaccaagcaagcaacaaagcaagcaagcaaccaac
caaccaaccaagcaaccaaccaaccaaccaaccaagcaaccaaacaaccaaccaaccaac
caaccaagcaaccaagcaaccaatcaagcaaccaaccaaccaaccaaccaagcaaccaac
caagcaaccaaccaagcaagcaacgaagcaagcaaccaagcaaccaatgaagcaagcaac
caagcaaccaatgaagcaagcaaccaagcaagcaagcaaccaaccaaccaagcaaccaac
caaccaaccagccaagcaagcaagcaagcaagcaagcaagcaagcaagcaagcaaccaac
caaccaaccaagcaaccaagcaaacaaccaagcaaccagccaaccaagcaaccaagcaac
caaccaagcaaccaacgaaccaaccaaccaagcaaccagtcaaccaataagtaa

>gi568815577f:33166466_33396354|GENSCAN_predicted_peptide_2|586_aa
MLLSQNAFIFRSLNLVLMVYISLVFGISYDSPDYTDESCTFKISLRNFRSILSWELKNHS
IVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNTTLF
SCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKK
HKPEIKGNMSGNFTYIIDKLIPNTNYCVSVYLEHSDEQAVIKSPLKCTLLPPGQESVFNQ
KIFESTYDLEAPPLRIVPPFQIEPVYILHALIDALCLPKMYKTKLHPDQGFSGSPGAVSW
AIGHSYLTQTESLQMRQPPFGQGQFLMCPELVPANGFVVSLTSRMEPQTFLNFHNFLAWP
FPNLPPLEAMDMVEVIYINRKKKVWDYNYDDESDSDTEAAPRTSGGGYTMHGLTVRPLGQ
ASATSTESQLIDPESEEEPDLPEVDVELPTMPKDSPQQLELLSGPCERRKSPLQDPFPEE
DYSSTEGSGGRITFNVDLNSVFLRVLDDEDSDDLEAPLMLSSHLEEMVDPEDPDNVQSNH
LLASGEGTQPTFPSPSSEGLWSEDAPSDQSDTSESDVDLGDGYIMR

>gi568815577f:33166466_33396354|GENSCAN_predicted_CDS_2|1761_bp
atgcttttgagccagaatgccttcatcttcagatcacttaatttggttctcatggtgtat
atcagcctcgtgtttggtatttcatatgattcgcctgattacacagatgaatcttgcact
ttcaagatatcattgcgaaatttccggtccatcttatcatgggaattaaaaaaccactcc
attgtaccaactcactatacattgctgtatacaatcatgagtaaaccagaagatttgaag
gtggttaagaactgtgcaaataccacaagatcattttgtgacctcacagatgagtggaga
agcacacacgaggcctatgtcaccgtcctagaaggattcagcgggaacacaacgttgttc
agttgctcacacaatttctggctggccatagacatgtcttttgaaccaccagagtttgag
attgttggttttaccaaccacattaatgtgatggtgaaatttccatctattgttgaggaa
gaattacagtttgatttatctctcgtcattgaagaacagtcagagggaattgttaagaag
cataaacccgaaataaaaggaaacatgagtggaaatttcacctatatcattgacaagtta
attccaaacacgaactactgtgtatctgtttatttagagcacagtgatgagcaagcagta
ataaagtctcccttaaaatgcaccctccttccacctggccaggaatcagtttttaatcag
aaaatctttgaatctacctatgacctggaagcccccccacttcgaattgtcccacctttc
cagattgaaccagtgtacatcttacatgcattgattgatgccttatgtctccctaaaatg
tataaaaccaagctgcaccctgaccaagggttctcgggatctcctggggctgtgtcatgg
gccattggtcactcatatttgactcagactgaatctcttcaaatgaggcagccccctttt
gggcaagggcagttccttatgtgtccggagttggttcctgccaatgggttcgtggtctcg
ctgacttcaagaatggagccgcagaccttcctgaattttcataactttttagcctggcca
tttcctaacctgccaccgttggaagccatggatatggtggaggtcatttacatcaacaga
aagaagaaagtgtgggattataattatgatgatgaaagtgatagcgatactgaggcagcg
cccaggacaagtggcggtggctataccatgcatggactgactgtcaggcctctgggtcag
gcctctgccacctctacagaatcccagttgatagacccggagtccgaggaggagcctgac
ctgcctgaggttgatgtggagctccccacgatgccaaaggacagccctcagcagttggaa
ctcttgagtgggccctgtgagaggagaaagagtccactccaggacccttttcccgaagag
gactacagctccacggaggggtctgggggcagaattaccttcaatgtggacttaaactct
gtgtttttgagagttcttgatgacgaggacagtgacgacttagaagcccctctgatgcta
tcgtctcatctggaagagatggttgacccagaggatcctgataatgtgcaatcaaaccat
ttgctggccagcggggaagggacacagccaacctttcccagcccctcttcagagggcctg
tggtccgaagatgctccatctgatcaaagtgacacttctgagtcagatgttgaccttggg
gatggttatataatgagatga

>gi568815577f:33166466_33396354|GENSCAN_predicted_peptide_3|480_aa
MAWSLGSWLGGCLLVSALGMVPPPENVRMNSVNFKNILQWESPAFAKGNLTFTAQYLRIF
QDKCMNTTLTECDFSSLSKYGDHTLRVRAEFADEHSDWVNITFCPVDDTIIGPPGMQVEV
LADSLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKNGTDEKFQITPQYDFEVLRNLE
PWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHDETVPSWMVAVILMASVFMVCLALLGCF
ALLWCVYKKTKYAFSPRNSLPQHLKEFLGHPHHNTLLFFSFPLSDENDVFDKLSVIAEDS
ESGKQNPEKRSYYPGHSTEKQKNGKYEWLGYKPEKSSCKRRLASWKLAQVNAAAVPIEKG
YLEAKYIQYGGSSSLLFVVMCAGVMVLARKISFLRGSHLHEASCHIGEVTWLGPEDASSS
QQRTGNRGSQSNSNRLSGINFSTSQKHFGPQIPKGTLFFILENTMPTYQNKGQIGAFASK

>gi568815577f:33166466_33396354|GENSCAN_predicted_CDS_3|1443_bp
atggcgtggagccttgggagctggctgggtggctgcctgctggtgtcagcattgggaatg
gtaccacctcccgaaaatgtcagaatgaattctgttaatttcaagaacattctacagtgg
gagtcacctgcttttgccaaagggaacctgactttcacagctcagtacctaaggatattc
caagataaatgcatgaatactaccttgacggaatgtgatttctcaagtctttccaagtat
ggtgaccacaccttgagagtcagggctgaatttgcagatgagcattcagactgggtaaac
atcaccttctgtcctgtggatgacaccattattggaccccctggaatgcaagtagaagta
cttgctgattctttacatatgcgtttcttagcccctaaaattgagaatgaatacgaaact
tggactatgaagaatgtgtataactcatggacttataatgtgcaatactggaaaaacggt
actgatgaaaagtttcaaattactccccagtatgactttgaggtcctcagaaacctggag
ccatggacaacttattgtgttcaagttcgagggtttcttcctgatcggaacaaagctggg
gaatggagtgagcctgtctgtgagcaaacaacccatgacgaaacggtcccctcctggatg
gtggccgtcatcctcatggcctcggtcttcatggtctgcctggcactcctcggctgcttc
gccttgctgtggtgcgtttacaagaagacaaagtacgccttctcccctaggaattctctt
ccacagcacctgaaagagtttttgggccatcctcatcataacacacttctgtttttctcc
tttccattgtcggatgagaatgatgtttttgacaagctaagtgtcattgcagaagactct
gagagcggcaagcagaatcctgaaaaaagaagttattatccagggcacagtacagagaaa
caaaagaatggaaaatatgagtggttaggatacaagcctgaaaaatcaagctgcaagcgt
agattagcaagctggaagcttgcacaggtgaatgcggcagctgtgccaatagaaaaggga
tacctggaagccaagtacatccaatatggaggttcctcctcccttctctttgtcgtcatg
tgtgcaggtgtcatggtgctggccaggaagatttctttcctgaggggttcacacttgcat
gaagcaagctgccatattggagaagtcacatggctaggacctgaggatgcctcctccagc
caacaacgaacagggaatcgaggttctcaatccaacagcaacaggctctctggcatcaat
ttttccacttctcagaaacactttggcccacaaattcccaaaggaaccttgttcttcatt
ctggaaaacacgatgccaacatatcagaataaaggacagataggagcttttgcttcaaag
tga

>gi568815577f:33166466_33396354|GENSCAN_predicted_peptide_4|389_aa
MMVVLLGATTLVLVAVAPWVLSAAADAQSGKPSVHFAAPKIKPDLGSQINQEKVVFWVLS
CRLPVAVYGSSGAPGSHPREMAVPELCVEFDSFRESTAAPLCQVMRRVIQVCEGQLDVQT
EGTGAISGYPTTQFMTQVVIQGDITSYDAVNTEGKAAEIHYTFPPLQWEMGQGKLFAKYA
SNKSLISKELKQSTTKPKSIKRTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR
AEKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDGLSFTY
SLVIWKNSSGVEYFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQTDEDHKKYS
SQTSQDSGNYSNEDESESKTSEELQQDFV

>gi568815577f:33166466_33396354|GENSCAN_predicted_CDS_4|1170_bp
atgatggtcgtcctcctgggcgcgacgaccctagtgctcgtcgccgtggcgccatgggtg
ttgtccgcagccgcagacgcccagtctgggaaaccttcggtccactttgccgcgccaaag
attaaacccgacctgggctcgcaaatcaaccaggagaaagtggtgttctgggtcctctct
tgccgcttgcctgtggccgtgtacgggtcctcgggagcgcccgggtcccacccccgtgaa
atggcggtgccagagctttgtgtcgagtttgattctttccgggaaagtaccgcggctccg
ctgtgtcaagtgatgcgcagggtgatccaggtgtgtgaggggcagctggatgtccagact
gagggcactggtgccatcagtggctatcctaccactcaattcatgacccaggtggtgatc
cagggtgatatcaccagttatgatgcagttaacacagaggggaaagctgctgagatacac
tatactttcccacccctgcagtgggagatggggcaggggaaactatttgcaaaatatgca
tccaacaagagcttaatatccaaggaactcaaacaatcaacaacaaaacccaaatccatc
aaaagaactgggatggataattggataaaattgtctgggtgtcagaatattactagtacc
aaatgcaacttttcttcactcaagctgaatgtttatgaagaaattaaattgcgtataaga
gcagaaaaagaaaacacttcttcatggtatgaggttgactcatttacaccatttcgcaaa
gctcagattggtcctccagaagtacatttagaagctgaagataaggcaatagtgatacac
atctctcctggaacaaaagatagtgttatgtgggctttggatggtttaagctttacatat
agcttagttatctggaaaaactcttcaggtgtagaatatttctctgaacagccattgaag
aatcttctgctttcaacttctgaggaacaaatcgaaaaatgtttcataattgaaaatata
agcacaattgctacagtagaagaaactaatcaaactgatgaagatcataaaaaatacagt
tcccaaactagccaagattcaggaaattattctaatgaagatgaaagcgaaagtaaaaca
agtgaagaactacagcaggactttgtatga

>gi568815577f:33166466_33396354|GENSCAN_predicted_peptide_5|120_aa
XWVTWRFLWLTASDFSINFVAKAPCTVLCMVRTVWFVSDSGAFPDAGLSVLKLGKPRVNQ
DESAALPRALDKPAAGDILTTQPHLHYGLYPVPKLLSKKNEKNEDMLTIRRRRMGREEFC

>gi568815577f:33166466_33396354|GENSCAN_predicted_CDS_5|363_bp
ntctgggtcacgtggcgcttcctgtggctcactgcctctgacttttcaatcaactttgtg
gctaaagcaccatgcactgtgctttgcatggtccggactgtctggtttgtcagcgactca
ggggcttttccagatgcgggactttcagtgctgaaactgggaaagcccagggtaaaccag
gatgagtcagcggccctgcctcgtgctctggataagcctgctgctggagacatcctgacc
actcagccccacctgcattatggcttgtacccagttcccaagctcttgtccaagaagaat
gagaagaatgaggatatgctgacaattcgaaggcggaggatgggcagagaagaattttgt
tga