GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:48:44

Sequence gi568815580f:9002744_9234276 : 231533 bp : 39.80% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   4943   4982   40                              -3.55
 1.01 Init +   8720   8948  229  1  1   49    4   185 0.206   4.78
 1.02 Term +  14677  15017  341  2  2   75   47   161 0.223   4.41
 1.03 PlyA +  16136  16141    6                               1.05

 2.00 Prom +  17334  17373   40                              -8.55
 2.01 Sngl +  17542  18024  483  0  0   79   44   492 0.619  39.72
 2.02 PlyA +  22053  22058    6                               1.05

 3.00 Prom +  25272  25311   40                              -6.25
 3.01 Init +  30083  30753  671  1  2   68   43   259 0.025  14.24
 3.02 Intr +  40401  40496   96  0  0  119   72    42 0.400   3.91
 3.03 Term +  41747  41816   70  2  1   50   37    98 0.297  -2.67
 3.04 PlyA +  43553  43558    6                               1.05

 4.00 Prom +  47233  47272   40                              -4.75
 4.01 Init +  47486  47833  348  1  0   60   49   161 0.224   6.63
 4.02 Intr +  56878  56949   72  0  0  119   48    67 0.651   4.48
 4.03 Intr +  61889  61918   30  1  0  128   69    23 0.539   1.81
 4.04 Term +  67271  67393  123  1  0   59   50   159 0.693   6.60
 4.05 PlyA +  67401  67406    6                               1.05

 5.00 Prom +  68873  68912   40                              -3.75
 5.01 Init +  70864  70929   66  0  0   69   96    19 0.354   1.92
 5.02 Intr +  84399  84531  133  2  1   67   42   121 0.900   4.70
 5.03 Term +  85348  85448  101  2  2   81   39   129 0.673   4.61
 5.04 PlyA +  86964  86969    6                               1.05

 6.00 Prom +  90414  90453   40                              -3.65
 6.01 Init + 100001 100054   54  1  0   77   82   142 0.989  11.83
 6.02 Intr + 116583 116645   63  2  0   48   86    63 0.418   0.10
 6.03 Intr + 116731 116847  117  0  0   69   79    85 0.937   5.44
 6.04 Intr + 119770 119938  169  0  1   48   50   163 0.973   7.10
 6.05 Intr + 122131 122240  110  2  2   53   73    81 0.758   2.18
 6.06 Intr + 122416 122589  174  0  0   48   67    69 0.408   0.01
 6.07 Intr + 124088 124164   77  1  2   97   91    94 0.962   7.99
 6.08 Intr + 133784 133887  104  2  2   88   84   -12 0.152  -2.70
 6.09 Intr + 133996 134353  358  2  1   51   97   434 0.855  33.99
 6.10 Term + 134785 134902  118  1  1   52   39    88 0.533  -2.67
 6.11 PlyA + 135110 135115    6                               1.05

 7.04 PlyA - 136516 136511    6                               1.05
 7.03 Term - 165461 164096 1366  1  1  -11   42   476 0.847  22.96
 7.02 Intr - 166427 165571  857  2  2   48   72   435 0.958  27.12
 7.01 Init - 168082 167735  348  1  0   73   37   324 0.508  23.03
 7.00 Prom - 176129 176090   40                              -5.55

 8.00 Prom + 183577 183616   40                              -7.25
 8.01 Init + 186415 186720  306  0  0   68  -56   254 0.097   6.34
 8.02 Intr + 192808 192955  148  0  1   67   75   188 0.857  14.29
 8.03 Intr + 205914 206060  147  1  0   30   59   127 0.805   3.29
 8.04 Intr + 208841 209041  201  0  0  112  110   193 0.998  22.24
 8.05 Intr + 213014 213151  138  0  0   32   30   160 0.517   4.11
 8.06 Intr + 214015 214157  143  2  2   26   95   133 0.850   6.95
 8.07 Intr + 219109 219256  148  0  1  112   72   152 0.421  14.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 186415 186726  312  0  0   68   37   253 0.888  13.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580f:9002744_9234276|GENSCAN_predicted_peptide_1|189_aa
MGTEGELATCEELPIECDKCINTHIQLGRQGCGGSGCWSFQRVSQEQETLHVGRNDTCQM
EGMKKAVMGEQEMQWRMQFPSGTTKNKHKPGSCQRRGSPWGAHRTHVRARRPPANHESVK
EAATKAEKPLPSQVALRCTGALTVELALCLFPQLPPLRFRPNCWTHCRVGLSTFPWHIVL
GGSFFFSIW

>gi568815580f:9002744_9234276|GENSCAN_predicted_CDS_1|570_bp
atggggaccgaaggagagttagctacctgtgaggaactccccatcgagtgtgacaaatgc
ataaacacgcacatacagctgggaaggcagggctgtggtgggagtgggtgttggagcttc
cagagggtgtcacaggagcaagaaacattgcatgttgggagaaatgacacgtgccagatg
gagggaatgaagaaggccgtgatgggggagcaagagatgcaatggagaatgcagtttccc
tctggcacaaccaaaaataaacacaaaccaggctcctgccaaaggaggggcagtccctgg
ggcgcccaccgcacgcatgtgagagctcgcaggccacctgccaatcatgaatctgttaag
gaagcggccacgaaggcagagaaacctctcccatcgcaggttgcgctgcgatgcacaggg
gcgctgactgttgagttggcgctctgtttatttccccaactgcctcctctcaggttccgt
cccaactgctggactcactgccgcgtgggcctgagcacatttccttggcacattgtcctc
ggtggaagttttttcttctcgatttggtga

>gi568815580f:9002744_9234276|GENSCAN_predicted_peptide_2|160_aa
MSTDKTGENFHLICDTKAPFAVHRIAPEEAKYRLCKVRKIFVDTKGIPHLLTHDAHTICY
PDPLIKVNDTIQVDLENGKITGFIKFNTENLCMVTGGANLGRIGVITNRERHPGSFDVVH
GKDANSNINKPWISLPQGKVMRLTIAEETDKRLVAKQTSG

>gi568815580f:9002744_9234276|GENSCAN_predicted_CDS_2|483_bp
atgagcactgacaagacgggagagaatttccatctgatctgtgacaccaaggctcccttt
gctgtacatcgtattgcacctgaggaggccaagtacaggttgtgcaaagtgagaaaaata
tttgtggacacaaaaggaatccctcatctgctgactcatgatgctcataccatctgctac
cctgatcccctcatcaaggtgaatgacaccattcaggttgatttggagaatggcaagatt
actggtttcatcaagttcaacactgagaacctgtgtatggtgactggaggtgctaacctg
ggaagaattggtgtgatcaccaacagagagaggcaccctggttcttttgatgtggttcat
gggaaagatgccaacagcaacatcaacaaaccctggatttctcttccccaaggaaaggta
atgcgcctcaccattgctgaagagacagacaagagactggtggccaaacagaccagtgga
tga

>gi568815580f:9002744_9234276|GENSCAN_predicted_peptide_3|278_aa
MTPKALQRSLRLPLSSQARSARALREERFKGDPRAPMGLWGSLPRGTPSFGSLNSGAVLL
DHPSCGSGGQDATWVNNPEGTVCKPWWHTCGANSPGMQNARTVEAWLPPPRFQRVPHNLS
LKALNCHKAGCGRESPLRPCPAELQGQDHCREPPIGQCLVRPCKTATPKSPKPVEPAVPA
SGQCQPGRAISIQLQFLRAAVWASSSKAMVVGSPGGMGTQSPLHTGVPNPRPRTSSGPWP
VRNWAAQQEMSRGQNEMTVAHECELKEQYPCGSGKELS

>gi568815580f:9002744_9234276|GENSCAN_predicted_CDS_3|837_bp
atgactccaaaggcacttcagagatctttgaggctgccactctcgtcacaggcccggagt
gctagggccttgagggaagaacgtttcaaaggagatcccagggcacccatgggactttgg
ggctcactgcccaggggcaccccaagcttcggttccctgaattctggtgcagtactcctt
gaccaccccagctgtggctcagggggccaagatgcaacttgggtcaacaatccggaaggc
acagtatgtaaaccttggtggcatacatgtggggctaactctccaggcatgcagaatgca
agaacagtggaagcatggctacctccacctagatttcaaagggtgcctcacaacctcagt
ctcaaagctctgaactgccacaaggcagggtgtggcagagagtccccactacggccatgc
ccagcagagctacagggtcaagaccactgcagggagcccccaatagggcaatgcttagtg
aggccatgcaagacagccacccctaaaagccccaaacctgtagagcctgcagtgccagcc
agcgggcagtgccagccaggaagagccataagtatccaactccaattcctgagagctgca
gtgtgggcttcatccagcaaagccatggtagtggggtctcctgggggaatggggacccaa
tccccactccacacaggggtccctaaccccaggccacgaactagtagtggtccgtggcct
gttaggaactgggctgcacagcaggagatgagcagagggcaaaacgaaatgaccgtagca
catgagtgtgaattaaaagaacagtatccttgtggctctggcaaagagctctcttaa

>gi568815580f:9002744_9234276|GENSCAN_predicted_peptide_4|190_aa
MWKQFWNWITDRSWNSLKGSEEDKKMWESLELPRDWLNGFDQNSDNDMDNEIQAEVVSDR
DEELVGNWSKADSCYVLAKRLAAFCPCSRDLWNFELEGDDLWYLAEEISKQQSIQEEQTW
QARGLKKLEGPQDKPLMKSLGFGFAMLPRQNTVLIFGQQEGALLREGKLPGTRVLCEICK
ALHKEGKQFH

>gi568815580f:9002744_9234276|GENSCAN_predicted_CDS_4|573_bp
atgtggaagcaattttggaactggataacagacagaagttggaacagtttgaagggctca
gaagaagacaaaaaaatgtgggaaagtttggaacttcctagagactggctgaatggcttt
gaccaaaattctgataatgatatggacaatgaaatccaggctgaggtggtctcagataga
gatgaggaacttgttgggaactggagtaaagctgactcttgctatgttttagcaaagaga
ctggcagcattttgcccctgctctagagatttgtggaactttgaacttgagggagatgat
ttatggtatctagcagaggaaatttctaagcagcaaagcattcaagaggaacagacttgg
caagccagagggctgaagaagctagaggggccacaggataaaccactgatgaaatcactg
ggattcggttttgccatgttgcccaggcagaacactgtcctgatatttgggcagcaggag
ggtgccctgcttcgagaaggaaaattaccagggacccgtgtgctctgtgaaatatgtaag
gctctacacaaggaaggaaagcagttccactga

>gi568815580f:9002744_9234276|GENSCAN_predicted_peptide_5|99_aa
MMKCHIRFSKQTSQSPKETNSKKLANICTDDIYRKLETIYKSINREMKNKVKIPKNIESA
VDAGCGDPDKPPLCPLTTELQSSGAAGGGPAGPVGATVH

>gi568815580f:9002744_9234276|GENSCAN_predicted_CDS_5|300_bp
atgatgaaatgccacattcgcttcagtaaacagacatctcaaagtccaaaggaaacaaac
tcaaagaaacttgcaaatatttgcacagatgacatctatagaaagttggaaacaatctac
aagtctatcaatagggaaatgaaaaataaagtgaaaattcccaagaacattgaatcagca
gttgatgctggatgtggtgatcctgacaagcctcctctctgccctctgaccaccgagctg
cagagctccggagctgcaggaggaggacctgcagggcctgtgggtgcaactgtacactag

>gi568815580f:9002744_9234276|GENSCAN_predicted_peptide_6|447_aa
MFFSAALRARAAGLTAHWHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPV
LDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCML
RNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQINDNYYKTNFKTLDY
EKFNNLDINTENNPSVANYQDLTESNILPHFTSDTIIIIIICRNKLQIQEDLTAKDIEEI
IDELKAGKIPKPGPSVCGGEAVTLVRVGRGDRPARRAEFRPAPLRRLPLVTCPRVSRARV
AANRGATLSWERGGCGERRTETGDVFKPGSGGFTGGCSGDEDNDSDGYAEALVPGVKPPA
PALPRVRTGEGGVATGKEEGGARFRACPRRQGGDPLSSALLPFPLPRASRRACADAGESA
AAARAGSVGGTRVLGEVDEIKKGKLLL

>gi568815580f:9002744_9234276|GENSCAN_predicted_CDS_6|1344_bp
atgttcttctccgcggcgctccgggcccgggcggctggcctcaccgcccactggcacaga
gatactcctgagaataaccctgatactccatttgatttcacaccagaaaactataagagg
atagaggcaattgtaaaaaactatccagaaggccataaagcagcagctgttcttccagtc
ctggatttagcccaaaggcagaatgggtggttgcccatctctgctatgaacaaggttgca
gaagttttacaagtacctccaatgagagtatatgaagtagcaactttttatacaatgtat
aatcgaaagccagttggaaagtatcacattcaggtctgcactactacaccctgcatgctt
cgaaactctgacagcatactggaggccattcagaaaaagcttggaataaaggttggggag
actacacctgacaaacttttcactcttatagaagtggaatgtttaggggcctgtgtgaac
gcaccaatggttcaaataaatgacaattactataagacaaattttaaaactttagattat
gaaaaatttaataatttggatattaatacagaaaataatcctagtgtagccaactatcag
gacttaactgagagtaatattttgccacattttacttcagatactatcatcatcatcatc
atttgtagaaataagctacagatacaggaggatttgacagctaaggatattgaagaaatt
attgatgagctcaaggctggcaaaatcccaaaaccagggccaagtgtctgcggcggggag
gcggtgacactagtccgagtggggcgtggagaccgaccagcacgaagggcggagttccgg
cccgcacccctccgccgcctgccgcttgtcacgtgtccgcgggtgtcacgtgctcgcgtc
gcagccaatcgcggggcgacgctgtcctgggagcgaggaggctgtggtgagagacggacc
gagaccggagatgttttcaagcccggctccggcggctttacaggcggctgcagcggcgac
gaagacaacgacagcgacggctacgccgaagcactcgttccgggggtgaagcctcctgcg
ccggccttgcctcgggtccgtacgggtgaggggggcgtggcgacaggaaaggaggaagga
ggggcgcggtttcgagcttgtccccggcgccagggaggagatcccctcagttctgcgctg
ctcccgttccccctccccagagcaagccgccgagcgtgcgccgacgccggggagtctgcc
gcggccgctcgggccgggagcgtcggaggtacccgggtcctgggagaggtggatgaaatc
aagaaggggaaattgctgctttag

>gi568815580f:9002744_9234276|GENSCAN_predicted_peptide_7|856_aa
MGKKQSRKTGNSKNQSASPPPKERSSSPAMEQSWRENDFEKLREGFRRSNYSELQEEIQT
NGKEVKSFEKKIDEWITRITNAEKSLKDLMELKTKAPELHDECRSLSSRCDQLEERHHTY
SKIDHIVGSKALLSKCKRTEIITNCLSDHSAIKLELRIKKLTQNHSATWKLNNLLLNDYW
VNNETKAEITMFFETNENKDTTYQNLWDTFKAVCRGKSIALNAHKRKQERSKIDTLTSQL
KELEKQEQTHSKGSRRQEITKIRAELKEIETQKTLQKINESRSWFSEKINKIDRPLARLI
KKKREKNQIDAIKNDKGDTTTDPTEIQTTIREYYKHHYTNKLENQEEMDEFLDTYILPRL
NQEEVESLNRPITGSEIEAIINSLPMKKSPGPDGFTAEFYQSLAETQQKKENFRPISLMN
TDAKILDKLLANRIQQHIKKLIHHDQVGFIPGMQGWFNICKSINVSQHINRTKDKNHMII
SIEAEKAFDKIQQPFMLKTLNKLGIDGTYLKTIRAMYDKPTANIILNGQKLEAFPLETGT
RQRCPPSPLLFNTVLEVVARTIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQN
LLKLISNFSKVSGYKINVQKSQAFLNTNNKQTESQIMSELPFTIASKRIKYLGIQLTRDV
KDFFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIMTTAILPKVIYRFNAIPIKLPMTFF
TELEKTTLKFIWNQKRARIAKSILSLKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDID
QWNRTEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPIQ
KLIQDGLKTYMLDLKP

>gi568815580f:9002744_9234276|GENSCAN_predicted_CDS_7|2571_bp
atgggaaaaaaacagagcagaaaaactggaaactctaaaaatcagagcgcctctcctcct
ccaaaggaacgcagctcctcaccagcaatggaacaaagctggagggagaatgactttgaa
aagttgagagaaggcttcagaagatcaaactactccgagctacaagaggaaattcaaacc
aatggcaaagaagttaaaagctttgaaaaaaaaattgacgaatggataactagaataacc
aatgcagagaagtccttaaaggacctgatggagctgaaaaccaaggcaccagagctacat
gacgaatgcagaagtctcagcagccgatgcgatcaactggaagaaaggcaccacacctac
tccaaaattgaccacatagttggaagtaaagcactcctcagcaaatgtaaaagaacagaa
attataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaa
ctcactcaaaaccactcagctacatggaaactgaacaacctgctcctgaatgactactgg
gtaaataatgaaacgaaggcagaaataacgatgttctttgaaaccaacgagaacaaagac
acaacataccagaatctctgggacacattcaaagcagtgtgtagagggaaatctatagca
ctaaatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaatta
aaagaactagagaagcaagagcaaacacattcaaaaggtagcagaaggcaagaaataact
aagatcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaattaatgaa
tccaggagctggttttctgaaaagatcaacaaaattgatagaccactagcaagactaata
aagaagaaaagagaaaagaatcaaatagacgcaataaaaaatgacaaaggggataccacc
accgatcccacagaaatacaaactactatcagagaatactataaacaccactatacaaat
aaactagaaaatcaagaagaaatggatgaattcctcgacacatacatcctcccaagacta
aatcaggaagaagttgaatctctgaatagaccaataacaggctctgaaattgaggcaata
atcaatagcttaccaatgaaaaaaagtccaggaccagatggattcacagccgaattctac
cagagcctggcagagacacaacaaaaaaaagagaattttagaccaatatctttgatgaac
actgatgcaaaaatcctcgataaattactggcaaaccgaatccagcagcacatcaagaag
cttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaacatatgc
aaatcaataaatgtaagccagcatataaacagaaccaaagacaaaaaccacatgattatc
tcaatagaggcagaaaaggcctttgacaaaattcaacaacccttcatgctaaaaactctc
aataaattaggtattgatgggacgtatctcaaaacaataagagctatgtatgacaaaccc
acagccaatatcatactgaatgggcaaaaactggaagcattccctttggaaactggcaca
agacagagatgccctccctcaccactcctattcaacacagtgttggaagttgtggccagg
acaatcaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattg
tccctgtttgcagatgacatgattgtgtatctagaaaaccccatcgtctcagcccaaaat
ctcctcaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaa
tcacaagcattcttaaacaccaataacaaacaaacagagagccaaatcatgagtgaactc
ccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtg
aaggacttcttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaac
aaatggaagaacattccatgctcatgggtaggaagaatcaatatcatgacaacggccata
ctgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgactttcttc
acagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgcattgcc
aagtcaatcctaagcctaaagaacaaagctggaggtatcacactgcctgacttcaaacta
tactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagac
caatggaacagaacagagccctcagaaataatgccgcatatttacaactatctgatcttt
gacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgg
gaaaactggctagccatatgtaggaagctgaaactggatcccttccttacacctatacaa
aaattaattcaagatggattaaagacttacatgttagacctaaaaccataa

>gi568815580f:9002744_9234276|GENSCAN_predicted_peptide_8|411_aa
MEEVWSGLDRRSNQLQHPLKPKFNPDQGPLLNSVKAERGLEAAEEKSEASISWFMRFKER
SCLHNIKVQGEAPSANVEATASYPEDLAMIFDEDGYTKLQISSKDKIASYSKTPKIERSD
VSKEMKEKSSMKRKLPFTISPSRNEERDSDTEKEGPEKKKTKKEAGNKKSTPVSILFGYP
LSERKQMALLMQMTARDNSPDSTPNHPSQTTPAQKKTPSSSSRQKDKVNKRNERGETPLH
MAAIRGDVKQVKELISLGANVNVKDFAGFTTEPVKEIMKEIVDMSKKVAGEKFQNMDLGE
IEELVDTTSEVLIGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASSGHR
DIVKLLLRHGGNPFQANKHGERPVDVAETEELELLLKREVPLSDDDESYTX

>gi568815580f:9002744_9234276|GENSCAN_predicted_CDS_8|1233_bp
atggaggaagtttggagtggtctggatagaagatcaaaccagctacaacatccccttaaa
ccaaagttcaatccagatcaaggccctctcctcaattctgtgaaggctgagagaggtttg
gaagctgcagaagaaaagtctgaagctagcataagttggttcatgaggtttaaggaaaga
agctgtctccataacataaaagtgcaaggtgaagcaccaagtgctaatgtggaagctaca
gcaagttatccagaagatctagctatgatctttgatgaagatggctacactaaactacag
atttcaagtaaagacaagattgcatcctacagcaaaactccaaaaattgaacgaagtgat
gtgagcaaggagatgaaagagaaatcatccatgaaacgtaaacttccttttactattagc
ccatcaagaaatgaagaacgagattcagacacagagaaagaaggtccagaaaagaagaag
acaaaaaaggaagctggaaataagaaatccacaccagttagcattctttttggttatcca
ctctctgagcgaaaacagatggcacttcttatgcagatgacagcaagagacaacagtcca
gattccacaccaaatcatccatcacaaacaacgcctgcccaaaagaaaactcccagttct
tcatctcgacagaaagataaagttaataaaagaaatgaacgtggtgaaactcctttacac
atggctgctattcgaggagatgtgaaacaagttaaagaattaataagtttaggggcaaat
gtgaatgtgaaagattttgcaggatttaccacagaaccagtcaaggaaatcatgaaagag
attgtggatatgtcaaaaaaggtagcgggtgaaaagtttcaaaatatggatcttggagaa
attgaggagctagtagataccacatcagaggtattaataggttggacaccactgcatgaa
gcttgcaatgttggatattacgatgttgctaagatacttatagcagctggagcagatgtt
aacacacaaggattagatgatgacactccactccatgattctgctagtagtgggcacaga
gatatagtaaagctgttacttcgtcacggtggaaatccatttcaagctaataaacatggg
gagcgtccagtggatgtagcagaaacagaggagttggagttgctactaaaaagagaggtg
cctttatctgatgatgatgaaagttacacagnn