GENSCAN 1.0	Date run:  6-Nov-116	Time: 00:42:03

Sequence gi568815596r:10684261_10902641 : 218381 bp : 47.64% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5332   5424   93  2  0   70   12    99 0.262   0.44
 1.02 Term +   5646   5866  221  1  2   62   42   146 0.450   4.60
 1.03 PlyA +   7577   7582    6                               1.05

 2.00 Prom +  15198  15237   40                              -3.76
 2.01 Init +  23786  23806   21  1  0   87   96    24 0.702   3.10
 2.02 Intr +  25065  25197  133  2  1  108   94    75 0.881  10.32
 2.03 Intr +  36700  36737   38  2  2   78  113    64 0.506   5.88
 2.04 Intr +  36774  36872   99  2  0  102   96   -13 0.316   1.21
 2.05 Intr +  42242  42309   68  1  2   82   93    79 0.742   5.50
 2.06 Intr +  69721  69806   86  1  2   98   92    58 0.033   6.66
 2.07 Intr +  75006  75266  261  1  0   84   72   119 0.035   7.36
 2.08 Intr +  79933  80165  233  2  2   69  100   152 0.015  11.99
 2.09 Intr +  84459  84550   92  2  2   43   31   180 0.232   6.59
 2.10 Intr +  87579  87677   99  0  0   96   89   151 0.999  15.23
 2.11 Intr +  88282  88350   69  1  0  101  108    31 0.952   4.70
 2.12 Intr +  90528  90620   93  0  0   54   80   114 0.513   6.28
 2.13 Intr +  90718  90811   94  1  1   68   73    85 0.916   4.97
 2.14 Intr +  93325  93462  138  0  0   62   99    54 0.787   4.56
 2.15 Intr +  94312  94409   98  0  2  127   96   194 0.859  22.91
 2.16 Intr +  97983  98146  164  0  2   55   72   140 0.499   8.72
 2.17 Term +  98914  98948   35  2  2   56   41    12 0.122  -8.95
 2.18 PlyA +  99164  99169    6                               1.05

 3.21 PlyA -  99623  99618    6                               1.05
 3.20 Term - 100066  99998   69  1  0   84   54   129 0.701   7.04
 3.19 Intr - 100770 100674   97  2  1   61  105   -10 0.667  -1.99
 3.18 Intr - 103179 103021  159  2  0   62   91   184 0.754  15.20
 3.17 Intr - 104509 104437   73  2  1   39   98     3 0.426  -5.14
 3.16 Intr - 104721 104637   85  0  1  101   99   148 0.981  16.59
 3.15 Intr - 105629 105489  141  2  0   64   82   129 0.997  10.45
 3.14 Intr - 106573 106459  115  0  1    5   84   139 0.985   5.65
 3.13 Intr - 107665 107535  131  1  2   44  106   140 0.981  10.89
 3.12 Intr - 108942 108836  107  1  2  101   71    97 0.901   9.23
 3.11 Intr - 112947 112821  127  0  1   78  116    64 0.994   8.45
 3.10 Intr - 113497 113440   58  0  1   83  106    15 0.983   1.69
 3.09 Intr - 118380 118239  142  1  1  111  115    96 0.614  14.01
 3.08 Intr - 135094 135014   81  2  0  129  131   -32 0.633   4.81
 3.07 Intr - 136643 136511  133  2  1   46   84   127 0.121   8.32
 3.06 Intr - 137044 136970   75  1  0   76   84    25 0.106   0.61
 3.05 Intr - 146187 146051  137  1  2   68   21    81 0.063  -0.31
 3.04 Intr - 151201 151064  138  2  0   70   32   124 0.829   5.44
 3.03 Intr - 153402 153264  139  0  1   28  103    81 0.639   3.64
 3.02 Intr - 157207 157031  177  1  0   71   64   125 0.706   8.52
 3.01 Init - 157366 157328   39  1  0   92   58    66 0.611   2.30
 3.00 Prom - 168829 168790   40                              -4.96

 4.04 PlyA - 170242 170237    6                               1.05
 4.03 Term - 170745 170596  150  0  0   65   54   140 0.961   6.21
 4.02 Intr - 182568 182430  139  2  1   93   -6    99 0.101   1.47
 4.01 Init - 190221 189977  245  0  2   84   38   134 0.125   5.21

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  50567  50509   59  2  2   66   65    72 0.802   3.48


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:10684261_10902641|GENSCAN_predicted_peptide_1|104_aa
XSGAVTAVSLSPNADTSPGNCQPPLGLPESGACSSTVIPGPPSPCSAACGRWRRLMTHFL
EPEHAGKFPEEGRWLNPGRAAAGRKTSEALTTRRGCRRRCYGQD

>gi568815596r:10684261_10902641|GENSCAN_predicted_CDS_1|315_bp
ntttctggcgcggtgacggcagtgtccttgtctcccaatgccgacacctcccccggaaat
tgtcagccgcctctgggcctccccgagtcgggggcgtgctcgagcaccgtaatcccggga
cctccgagcccctgctccgcggcgtgcggccgctggcgccgactgatgacgcacttcctg
gagccggaacacgcgggcaagttcccggaagagggaaggtggctgaatccgggaagagcg
gcggccgggagaaaaactagtgaggctctgacaacccggcgtggctgtcggcgacgctgc
tacgggcaagactag

>gi568815596r:10684261_10902641|GENSCAN_predicted_peptide_2|606_aa
MSLMHVQEGQRVFSRMAGALGSRGFYTSVEVSGSGSSSLEGGDLQLPTASSDSTDHELIS
DRRTGNSEGGEGEVGVSWATGRTPAPTRTGKASLSTQVGTLDSLVGLSDELGKLDTFAES
LIRRMAQSVVEVMEDSKGKVQEHLLANGAELGAGRTQTALIAATAGKHTLPGLGPGMPTE
DRNPRGLSGLLGDGPQSGWSQSLMLLPAGQASFLFSDKTIIAQELPACAQHILMREPCAC
PPALPMMAAFVSTLMLGLGFRSLNHGCRAQAHVLKCVCILPVDLTSFVTHFEWDMAKYPV
KQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKED
FVLDSEYLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVI
EDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTSCVALKKGSSTFPDHK
VKVTPLGNPDRPAAGQTDRERESEGEGEGPLLRWLKVNFSEAFIAWIHIKALRVFVESVL
RYGLPVNFQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDVGIQKQQYFYSICGD
PGTATQ

>gi568815596r:10684261_10902641|GENSCAN_predicted_CDS_2|1821_bp
atgagcctgatgcacgtgcaggaggggcagagggtgttcagcaggatggcaggagccctg
gggagcaggggcttctacacaagtgtggaggtatcggggtctggcagcagcagcctggag
ggcggagacctgcagttgcccacagcatcctcagacagcaccgatcatgaactcatctct
gatcgtcgtacgggcaattcggaaggtggagagggtgaggtgggagtttcctgggcaacc
gggcgcacacccgcgcccacacggacaggaaaagcttcgctgtctacgcaggtggggacc
ttggattccctggttggcctctctgatgagttggggaaactcgacacctttgctgaaagc
ctcataaggagaatggctcagagcgtggtggaagtcatggaggactcaaaggggaaggtc
caggagcacctcctggcaaacggagcagagctgggagcaggaaggacacagacagctttg
attgcagccacagctggcaaacacaccttgcccggcctgggccctggaatgcccacagaa
gacagaaaccctcgaggcttgtctggcttgctgggcgatgggccgcagtctggttggtca
cagtccctcatgctgctgcctgccgggcaggcctcctttttgttctcggacaagaccatc
attgctcaagagttgccagcctgtgcacagcatattttgatgagggagccctgtgcctgc
ccgccggcgttgcccatgatggctgccttcgtgtccacgctgatgcttggcttgggattc
cgaagtctcaatcatggatgcagagcgcaggctcatgtgttgaaatgtgtttgtattctt
ccagttgacttaacatcctttgtgacccactttgaatgggacatggccaaatatcctgtc
aagcagccgctcgtgagtgtggtggacacaatagccaagcaactggcgcagatcgagatg
gacctgaagtcccgaacggccgcctacaacactctgaagacaaacctggagaacctggaa
aagaaatccatggggaacctcttcacccggacactgagtgatattgtgagcaaagaggac
ttcgtgctggattctgaatatctcgtcacacttctggtcatcgtccccaaaccaaactac
tcacaatggcaaaaaacctacgaatctctctcagacatggtggtccctcgatcaaccaaa
ctcattactgaggacaaggaagggggccttttcactgtgactctgtttcgaaaagtgatt
gaagatttcaaaaccaaggccaaagaaaacaagttcactgttcgtgaattttactatgat
gagaaggaaattgaaagggaaagggaggagatggccagattgctgtctgataagaagcaa
cagtatcaaacttcctgtgttgctcttaaaaagggatcatccaccttcccggaccacaag
gttaaggtaaccccgctaggtaaccctgataggcctgctgcggggcagaccgacagagag
agagagagtgagggcgagggtgagggccccctgctgcgctggctcaaggtgaacttcagt
gaagccttcattgcctggatccacatcaaggccctgagagtgtttgtggagtccgtgctc
aggtatggactaccagtgaacttccaggcagtgctcctgcagccgcataagaagtcatcc
accaagcgtttaagagaggttctaaactctgtcttccgacatctggatgaagtagccgct
acaagtatactggatgtaggtatccagaaacagcagtatttctacagcatctgtggagat
cccgggactgcaactcaataa

>gi568815596r:10684261_10902641|GENSCAN_predicted_peptide_3|740_aa
MAFPPVAQLPVGLAAVWAGPLDFSGSHAGKSPHQQQFLVFQQQLHPLLKVWGSTRGGGSL
SSFIVDSLSALKKLGAPEQAAILCLGFSDCKMRIITAPASKVSRGSNELMILARRSDRGW
GLGFPGGRTWKEYAPDKARDGNGTRLAHCQRPGQEGGLRSPTAGAVPAGKGARENLDPLA
RTRQACKLTEFHQFKHKHSAKTNGELIGTEVKLINRILPSTGLLCNGRDWKQQTRSTASR
GEKIPPASMRRDLREKLVWVCRPLAPVEVPANISSDFQPCSPTSPAHSLSRKSPIMYPST
TMANAPGLVSCTFFLAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR
LTPEWKKAATALKDVVKVGAVDADKHHSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTG
EAIVDAALSALRQLVKDRLGGRSGGYSSGKQGRSDSSSKKDVIELTDDSFDKNVLDSEDV
WMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI
KIFQKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAKRTCEEHQLCVVA
VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQSELETALGIGGFGYPAMA
AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPTIVEREPWDGRDGELP
VEDDIDLSDVELDDLGKDEL

>gi568815596r:10684261_10902641|GENSCAN_predicted_CDS_3|2223_bp
atggcgtttcctcctgtggcacagctgccagtggggctggccgccgtctgggctggtcct
ctagacttctctggctcccacgctggcaaatctccccaccagcagcagtttttggtgttc
cagcagcagctgcatcccctcctgaaggtctggggctccactcgagggggcggaagtctt
agttccttcattgttgactccctctcagccctaaagaagcttggagcccctgaacaagct
gcaattctgtgcctgggcttttctgactgcaaaatgaggataatcacagcccctgcctcc
aaagtgtcccgaggatcaaatgagttgatgatacttgcacggcgctcggatcgtggctgg
ggactgggcttccccggaggccgcacctggaaggaatacgccccggataaggcccgcgat
ggaaacggaacccggctggctcactgccagcggcctggtcaagaaggcgggctccggagc
ccgactgccggggctgtgcccgcaggaaaaggtgcccgagagaaccttgaccctctggcc
agaaccaggcaggcttgcaaactcactgagttccaccagttcaaacacaagcattcagcc
aaaacaaatggagaactgataggcacggaggtaaaattgattaaccgaatcttgccctcc
actggcttactgtgcaacggtagagactggaagcaacagacgaggagcacagcttccaga
ggagagaagatacccccagcatccatgagaagagacctccgggagaagcttgtgtgggtg
tgccgaccactggccccagttgaggtcccagccaacatcagctccgacttccagccatgc
tcaccaacttctcctgcccactccctatcaaggaaaagtcccataatgtatccatcaacc
accatggctaatgcacccggtctggtgagctgtaccttctttctggcagtgaatggtctg
tattcctctagtgatgatgtgatcgaattaactccatcgaatttcaaccgagaagttatt
cagagtgatagtttgtggcttgtagaattctatgctccatggtgtggtcactgtcaaaga
ttaacaccagaatggaagaaagcagcaactgcattaaaagatgttgtcaaagttggtgca
gttgatgcagataagcatcattccctaggaggtcagtatggtgttcagggatttcctacc
attaagatttttggatccaacaaaaacagaccagaagattaccaaggtggcagaactggt
gaagccattgtagatgctgcgctgagtgctctgcgccagctcgtgaaggatcgcctcggg
ggacggagcggaggatacagttctggaaaacaaggcagaagtgatagttcaagtaagaag
gatgtgattgagctgacagacgacagctttgataagaatgttctggacagtgaagatgtt
tggatggttgagttctatgctccttggtgtggacactgcaaaaacctagagccagagtgg
gctgccgcagcttcagaagtaaaagagcagacgaaaggaaaagtgaaactggcagctgtg
gatgctacagtcaatcaggttctggcctcccgatacgggattagaggatttcctacaatc
aagatatttcagaaaggcgagtctcctgtggattatgacggtgggcggacaagatccgac
atcgtgtcccgggcccttgatttgttttctgataacgccccacctcctgagctgcttgag
attatcaacgaggacattgccaagaggacgtgtgaggagcaccagctctgtgttgtggct
gtgctgccccatatccttgatactggagctgcaggcagaaattcttatctggaagttctt
ctgaagttggcagacaaatacaaaaagaaaatgtgggggtggctgtggacagaagctgga
gcccagtctgaacttgagaccgcgttggggattggagggtttgggtaccccgccatggcc
gccatcaatgcacgcaagatgaaatttgctctgctaaaaggctccttcagtgagcaaggc
atcaacgagtttctcagggagctctcttttgggcgtggctccacggcacctgtaggaggc
ggggctttccctaccatcgttgagagagagccttgggacggcagggatggcgagcttccc
gtggaggatgacattgacctcagtgatgtggagcttgatgacttagggaaagatgagttg
tga

>gi568815596r:10684261_10902641|GENSCAN_predicted_peptide_4|177_aa
MKHNRWKPRGIDNRVCRRCKGQILMPNIGYGSNKNTKHLGPSGLQKFLVYNVREMEVLLK
CNRVKDSRGHTTLKSWHCLSLEEKVALISPKDIIAFAENWELLLIDLTSSARIDDPMSAP
QELPESLKNPPGEITEQEKQTRGTNDKNNEIFEIWTADSYQKWCLVSTAATSITSTC

>gi568815596r:10684261_10902641|GENSCAN_predicted_CDS_4|534_bp
atgaagcataacaggtggaaacccagaggtattgacaacagggtttgtagaaggtgcaag
ggccagatcttaatgcccaacattggttatgggagcaacaaaaacacaaagcacctgggg
cctagtggcttacagaagttcctggtctacaatgtcagggagatggaagtgctgctgaag
tgcaacagagttaaggacagcagaggccacaccacgctcaagagctggcactgcctatcc
ttggaagaaaaagtagctttaatatcccccaaggacattatagcatttgcagagaactgg
gaactactgctgattgatttaacttcctcagcaagaattgatgaccccatgagtgctccc
caggagcttccagaatccctgaaaaatccacctggagaaattacagagcaagagaaacag
accagaggaacaaatgacaagaacaatgagatttttgaaatctggacagccgacagctat
cagaagtggtgcctggtgtcaacagctgccaccagcatcaccagcacctgttga