GENSCAN 1.0	Date run:  6-Nov-116	Time: 00:38:21

Sequence gi568815584f:92823360_93034881 : 211522 bp : 49.88% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4662   4974  313  2  1   59   54   147 0.769   5.89
 1.02 Intr +   7729   7865  137  2  2   28   35   109 0.776  -0.11
 1.03 Intr +   9763   9988  226  0  1   73   84   186 0.903  14.26
 1.04 Intr +  12200  12305  106  0  1   78   87   128 0.888  10.97
 1.05 Term +  30711  30933  223  0  1   -1   48   198 0.033   3.29
 1.06 PlyA +  31350  31355    6                               1.05

 2.00 Prom +  31885  31924   40                              -4.96
 2.01 Sngl +  33683  34396  714  1  0   58   42   268 0.848  15.43
 2.02 PlyA +  34759  34764    6                              -0.45

 3.00 Prom +  35133  35172   40                              -2.46
 3.01 Init +  50132  50315  184  1  1   83   75    91 0.878   6.58
 3.02 Intr +  53283  53343   61  1  1  102  103    24 0.740   3.09
 3.03 Term +  54822  55029  208  0  1   35   46   141 0.649   1.41
 3.04 PlyA +  55250  55255    6                               1.05

 4.04 PlyA -  55748  55743    6                               1.05
 4.03 Term -  68380  68222  159  1  0   57   45   136 0.476   4.14
 4.02 Intr -  73506  73457   50  1  2   94   75    32 0.447   0.90
 4.01 Init -  75054  75009   46  0  1   90   92    47 0.591   4.34
 4.00 Prom -  76755  76716   40                              -5.66

 5.00 Prom +  76880  76919   40                              -4.26
 5.01 Init +  79496  79665  170  1  2  100   78    23 0.346   1.51
 5.02 Intr +  83878  84039  162  1  0   88  111    23 0.487   3.69
 5.03 Intr +  92080  92188  109  1  1   12  110    69 0.175   1.79
 5.04 Term +  95713  95865  153  0  0  135   45    79 0.815   6.22
 5.05 PlyA +  96422  96427    6                               1.05

 6.00 Prom +  99755  99794   40                              -1.76
 6.01 Init + 100001 100046   46  1  1   87  105   137 0.996  14.14
 6.02 Intr + 100840 100886   47  2  2   81   94    13 0.739  -0.67
 6.03 Intr + 103246 103339   94  0  1   93   64    53 0.793   2.94
 6.04 Intr + 104191 104259   69  2  0  108   63    17 0.553   0.35
 6.05 Intr + 106358 106456   99  0  0   90   66   141 0.995  12.18
 6.06 Intr + 107891 108394  504  0  0   97   35   445 0.750  33.05
 6.07 Intr + 109011 109492  482  1  2   81   73   667 0.987  57.25
 6.08 Term + 111442 111525   84  0  0   91   53   134 0.997   7.85
 6.09 PlyA + 111904 111909    6                               1.05

 7.08 PlyA - 113577 113572    6                               1.05
 7.07 Term - 118545 118202  344  1  2  107   42   452 0.991  37.17
 7.06 Intr - 123134 122972  163  2  1  103  109   430 0.999  46.15
 7.05 Intr - 128654 128587   68  0  2  117   90    91 0.994  10.82
 7.04 Intr - 135007 134842  166  1  1   87   93   330 0.173  32.93
 7.03 Intr - 139036 138996   41  2  2   64  105     3 0.037  -2.46
 7.02 Intr - 139490 139392   99  0  0   99   32   123 0.057   7.88
 7.01 Init - 147798 147750   49  0  1   94   99    22 0.039   3.91
 7.00 Prom - 149008 148969   40                              -7.76

 8.17 PlyA - 149238 149233    6                               1.05
 8.16 Term - 149968 149893   76  0  1  120   54    32 0.231   0.31
 8.15 Intr - 158445 158320  126  2  0  102   71   120 0.769  11.49
 8.14 Intr - 159594 159564   31  1  1   97   70    -6 0.434  -4.31
 8.13 Intr - 161512 161366  147  2  0  110   38    35 0.261   0.91
 8.12 Intr - 163302 163173  130  0  1   53   63    52 0.642  -0.53
 8.11 Intr - 163782 163596  187  2  1   93   66   125 0.987  10.49
 8.10 Intr - 169394 169286  109  0  1   18   95   108 0.907   3.84
 8.09 Intr - 170638 170521  118  1  1   73   97   259 0.476  25.34
 8.08 Intr - 170991 170920   72  0  0   94   76    30 0.550   2.00
 8.07 Intr - 174584 174462  123  2  0   58   89    29 0.220   0.78
 8.06 Intr - 185375 185282   94  1  1   90   64    47 0.475   2.47
 8.05 Intr - 186427 186308  120  0  0   46   60    86 0.288   1.21
 8.04 Intr - 191950 191837  114  0  0   85   99    31 0.046   3.46
 8.03 Intr - 192287 192175  113  2  2   64    0    73 0.081  -4.72
 8.02 Intr - 193442 193317  126  2  0   94  109   250 0.983  28.58
 8.01 Intr - 207807 207703  105  0  0   98   78     5 0.142   0.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  31978  32634  657  0  0   49   36   194 0.855   6.48


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:92823360_93034881|GENSCAN_predicted_peptide_1|334_aa
MQSEAASANGETAASYLGDLAKIIDENGCTKQQIFNVDETAFYWKKMLSRTFIAPSPGEE
KSLPGFKASKDGLTLLLGANAAGDFKLKPVLIYNCGNPKTLKNDEWLKWKRLAVACVGED
VVQLELSPTAGGSAQQHNHFGKLAVSDKANLTNKTLSNSSQSELENRLHQLTETLIQKQT
MLESLSTEKNSLVFQLERLEQQMNSASGSSSNGSSINMSGIDNGEGTRLRNVPVLFNDTE
TNLAGMYGKVRKAASSIDQFRITNAEKSLKDLMELKTKARELPDECTSLSSRFNQLEERV
SVMEDEMNEMKREEKFREKRIKRNEQSLQEYGTT

>gi568815584f:92823360_93034881|GENSCAN_predicted_CDS_1|1005_bp
atgcaaagtgaagcagcaagtgctaatggagaaactgctgcaagttatctgggagatcta
gctaagatcattgatgaaaatggctgcactaaacaacagattttcaatgtagatgaaaca
gccttctattggaagaaaatgctatctaggactttcatagctccttctccaggagaggag
aagtcactgcctggattcaaagcttcaaaggacgggctgactctcttgttaggggctaat
gctgctggtgactttaagttaaagccagtgctcatttacaattgtggaaatcctaagacc
cttaagaatgatgaatggctgaaatggaaaagattggcagtagcatgtgttggtgaggat
gtggtgcagctggaactctcacccactgctggtggaagtgcacagcagcacaaccacttt
ggaaaactggctgtttctgataaggctaaccttaccaataaaactttaagcaatagcagt
cagtctgagttagaaaatcgactccatcagctaacagagactctcatccagaaacagacc
atgctggagagtctcagcacagaaaagaactccctggtctttcaactggagcgcctcgaa
cagcagatgaactccgcctctggaagtagtagtaatgggtcttcgattaatatgtctgga
attgacaatggtgaaggcactcgtctgcgaaatgttcctgttctttttaatgacacagaa
actaatctggcaggaatgtacggaaaagttcgcaaagctgctagttcaattgatcagttt
agaataacgaacgcagagaaatccttaaaggacctgatggagctgaaaaccaaggcacga
gaactacctgacgaatgcacaagcctcagtagccgattcaatcaactggaagaaagggta
tcagtgatggaagatgaaatgaatgaaatgaagcgagaagagaagtttagagaaaaaaga
ataaaaagaaacgaacaaagcctccaagaatatgggactacatga

>gi568815584f:92823360_93034881|GENSCAN_predicted_peptide_2|237_aa
MIVYLENPNVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIAS
KRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGIINIVKMAILPKVIY
RFNAIPIKLPMTFFTELEKTTLKFIWNQKRACIAKSILSQKNKDGGITLLDFKLCYKATV
TKTAWYWYQNRDIDQRNRTEPSEIMPHIYNHLIFDKPDKNKQWGKDSLLINGAGKTG

>gi568815584f:92823360_93034881|GENSCAN_predicted_CDS_2|714_bp
atgattgtgtatctagaaaaccccaacgtctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatac
accaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaacttacaagggacgtgaaggacctcttcaaggag
aactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaatattcca
tgctcatgggtaggaataatcaatatcgtgaaaatggccatactgcccaaggtaatttat
agattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaact
actttaaagttcatatggaaccaaaaaagagcctgcattgccaagtcaatcctaagccaa
aagaacaaagatggaggcatcacgctacttgacttcaaactatgctacaaggctacagta
accaaaacagcatggtactggtaccaaaacagagatatagaccaacggaacagaacagag
ccctcagaaataatgccacatatctacaaccatctgatctttgacaaacctgacaaaaac
aagcaatggggaaaggattccctattaataaatggtgctgggaaaactggctag

>gi568815584f:92823360_93034881|GENSCAN_predicted_peptide_3|150_aa
MAEDEGRAKDVLRGGGKKSLCKGTPVCKAIGSRETYSLPREQHGKNPAPRFNYLHLALPL
TGPGSHHSTFRRYEFGHCGCLIFVSKRPPAECQQRSAASKVAIDQRPFQRVPGIRGLLCV
PGEGIVVQWKAPRAHCGGPTELRMQTGFTC

>gi568815584f:92823360_93034881|GENSCAN_predicted_CDS_3|453_bp
atggcagaagatgaaggaagagcaaaagatgtcttacgtggtggcgggaaaaagagcttg
tgcaagggaactcccgtttgtaaagccatcggatctcgtgagacttactcactaccccga
gaacagcatgggaaaaacccagccccacgattcaattatctccacctggccctgcccttg
acaggacctggcagccaccattctactttccgtcgctatgaatttggccactgtggatgt
ctcatttttgtttccaagaggccacctgctgagtgtcagcagcggtcagcggcctccaag
gttgctattgatcaacgtccgttccagcgggttcctggcatccgaggcctgctctgtgtc
ccgggagaagggattgtggtgcaatggaaagctcccagggcacactgcgggggccccaca
gagctcaggatgcagacgggcttcacctgctga

>gi568815584f:92823360_93034881|GENSCAN_predicted_peptide_4|84_aa
MGLSFRLHPTQLVTLGVFLTPMFLLPVLSLLEMLQDINPRFLTLTFQCLRFRADPDADYD
VQLYSPTLIQPGTEEVLNKYLLSP

>gi568815584f:92823360_93034881|GENSCAN_predicted_CDS_4|255_bp
atggggctcagtttccgcctccatcctacacagcttgtgacactgggtgtgtttctgacg
cccatgttcttactcccagtcctgagtctgctggagatgctacaggatatcaaccccaga
ttcctaaccctgaccttccagtgcctgagattcagggctgacccggatgcagactatgat
gtgcagctctacagccccaccctgatccagccaggcacagaggaggttctcaacaaatat
ttgctgagcccctga

>gi568815584f:92823360_93034881|GENSCAN_predicted_peptide_5|197_aa
MAQSNSVYYRCQGRSNACTKPRGNPTQTRHWPIKGSARLRTAVTLFSSNLLSRFGRRFCV
GEMRTATLSHDDQTSLKLGGIDCFASMLVAASVLKTALSTYICTCLKCAIWDEVLIMEFR
HRRKRSLLGQVDEDEDTRSVPGLNWVQVRMMIVTASQVREPFTCMDCFTLHTLVSNSIIL
LLMGSHGKVAGMGRSGS

>gi568815584f:92823360_93034881|GENSCAN_predicted_CDS_5|594_bp
atggctcagagcaacagcgtttactacagatgccaagggagaagcaacgcctgtacgaag
ccacgtggaaacccgacccaaacccggcactggccaatcaagggcagtgcgcgactcagg
acagctgtcacactattttcttccaacctcctttcccgatttggaaggaggttctgtgtg
ggtgagatgaggacagcaacgctctcccatgatgaccaaaccagcttgaaactgggaggc
atcgactgttttgcctctatgctcgtggcagcctctgttttaaaaacagctttatcgaca
tacatttgtacatgtttaaagtgcgcaatttgggatgaagtcctcatcatggaattcaga
cacagaaggaagagaagtcttcttgggcaggtggatgaagatgaagacaccaggtcagtg
cctggattgaactgggtccaggtgaggatgatgatagtgactgcatcacaagtacgtgag
cctttcacctgcatggactgcttcactcttcacacacttgtgagcaattctatcatcctc
ctcctcatgggaagtcatgggaaagtggctggcatgggccgctcagggagttga

>gi568815584f:92823360_93034881|GENSCAN_predicted_peptide_6|474_aa
MRSAAVLALLLCAGQVTALPVNSPMNKGDTEVMKCIVEVISDTLSKPSPMPVSQECFETL
RGDERILSILRHQNLLKELQDLALQGAKERAHQQKKHSGFEDELSEVLENQSSQAELKEA
VEEPSSKDVMEKREDSKEAEKSGEATDGARPQALPEPMQESKAEGNNQAPGEEEEEEEEA
TNTHPPASLPSQKYPGPQAEGDSEGLSQGLVDREKGLSAEPGWQAKREEEEEEEEEAEAG
EEAVPEEEGPTVVLNPHPSLGYKEIRKGESTYDGEDLNERVWERGMGRSEALAVDGAGKP
GAEEAQDPEGKGEQEHSQQKEEEEEMAVVPQGLFRGGKSGELEQEEERLSKEWEDSKRWS
KMDQLAKELTAEKRLEGQEEEEDNRDSSMKLSFRARAYGFRGPGPQLRRGWRPSSREDSL
EAGLPLQVRGYPEEKKEEEGSANRRPEDQELESLSAIEAELEKVAHQLQALRRG

>gi568815584f:92823360_93034881|GENSCAN_predicted_CDS_6|1425_bp
atgcgctccgccgctgtcctggctcttctgctctgcgccgggcaagtcactgcgctccct
gtgaacagccctatgaataaaggggataccgaggtgatgaaatgcatcgttgaggtcatc
tccgacacactttccaagcccagccccatgcctgtcagccaggaatgttttgagacactc
cgaggagatgaacggatcctttccattctgagacatcagaatttactgaaggagctccaa
gacctcgctctccaaggcgccaaggagagggcacatcagcagaagaaacacagcggtttt
gaagatgaactctcagaggttcttgagaaccagagcagccaggccgagctgaaagaggcg
gtggaagagccatcatccaaggatgttatggagaaaagagaggattccaaggaggcagag
aaaagtggtgaagccacagacggagccaggccccaggccctcccggagcccatgcaggag
tccaaggctgaggggaacaatcaggcccctggggaggaagaggaggaggaggaggaggcc
accaacacccaccctccagccagcctccccagccagaaatacccaggcccacaggccgag
ggggacagtgagggcctctctcagggtctggtggacagagagaagggcctgagtgcagag
ccagggtggcaggcaaagagagaagaggaggaggaggaggaggaggaggctgaggctgga
gaggaggctgtccccgaggaagaaggccccactgtagtgctgaacccccacccgagcctt
ggctacaaggagatccggaaaggcgagagtacgtatgatggcgaagacctcaacgaacgt
gtctgggagagggggatgggtcggtcggaggctctggctgtggatggagctgggaagcct
ggggctgaggaggctcaggaccccgaagggaagggagaacaggagcactcccagcagaaa
gaggaggaggaggagatggcagtggtcccgcaaggcctcttccggggtgggaagagcgga
gagctggagcaggaggaggagcggctctccaaggagtgggaggactccaaacgctggagc
aagatggaccagctggccaaggagctgacggctgagaagcggctggaggggcaggaggag
gaggaggacaaccgggacagttccatgaagctctccttccgggcccgggcctacggcttc
aggggccctgggccgcagctgcgacgaggctggaggccatcctcccgggaggacagcctt
gaggcgggcctgcccctccaggtccgaggctaccccgaggagaagaaagaggaggagggc
agcgcaaaccgcagaccagaggaccaggagctggagagcctgtcggccattgaagcagag
ctggagaaagtggcccaccagctgcaggcactacggcggggctga

>gi568815584f:92823360_93034881|GENSCAN_predicted_peptide_7|309_aa
MSSVGPLGGTARGLLPDDRICSPPFMELTSLCGDDTMRLLEKNGLTFPFICKTRVAHGTN
SHEMAIVFNQEGLNAIQPPCVVQNFINHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDR
ESIFFNSHNVSKPESSSVLTELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIIN
NQTGQHAVIDINAFPGYEGVSEFFTDLLNHIATVLQGQSTAMAATGDVALLRHSKLLAEP
AGGLVGERTCSASPGCCGSMMGQDAPWKAEADAGGTAKLPHQRLGCNAGVSPSFQQHCVA
SLATKASSQ

>gi568815584f:92823360_93034881|GENSCAN_predicted_CDS_7|930_bp
atgagcagcgtggggcccttgggtggcacagcaagggggctgctcccagacgacaggatc
tgctcgccacccttcatggagctcacgagcctgtgcggggatgacaccatgcggctgctg
gagaagaacggcttgactttcccattcatttgcaaaaccagagtggctcatggcaccaac
tctcacgagatggctatcgtgttcaaccaggagggcctgaacgccatccagccaccctgc
gtggtccagaatttcatcaaccacaacgccgtcctgtacaaggtgttcgtggttggcgag
tcctacaccgtggtccagaggccctcactcaagaacttctccgcaggcacatcagaccgt
gagtccatcttcttcaacagccacaacgtgtcaaagccggagtcgtcatcggtcctgacg
gagctggacaagatcgagggcgtgttcgagcggccgagcgacgaggtcatccgggagctc
tcccgggccctgcggcaggcactgggcgtgtcactcttcggcatcgacatcatcatcaac
aaccagacagggcagcacgccgtcattgacatcaatgccttcccaggctacgagggcgtg
agcgagttcttcacagacctcctgaaccacatcgccactgtcctgcagggccagagcaca
gccatggcagccacaggggacgtggccctgctgaggcacagcaagcttctggccgagccg
gcgggcggcctggtgggcgagcggacatgcagcgccagccccggctgctgcggcagcatg
atgggccaggacgcgccctggaaggctgaggccgacgcgggcggcaccgccaagctgccg
caccagagactcggctgcaacgccggcgtgtcgcccagcttccagcagcattgtgtggcc
tccctggccaccaaggcctcctcccagtag

>gi568815584f:92823360_93034881|GENSCAN_predicted_peptide_8|596_aa
AFLREALDSFASAAVTKGHKLGSLNSRNAPLPVPELNLSRPIEEQGPLDVIIHKLTDVIL
EADQNDSQSLELVHRFQGMSHVVPSRASALPVAPSPFHLLNTVSLIGLETVGKTCPQCRL
TSLVDKQEVEAWKHVQLVHRDPAEPGVSLDFLSWCRVTMRLLASRCYGRQSWTHLAALVP
EKQIMSCSGVAVRLCARDKAHCVCLCLHVINPIATSPAKSTAGRILSGSLAKGQLSLLAS
FHGLGASENPERACAVGGHRDALPQSPYQCGAWGRHSQRSQCLEWICFREYIDAHPETIV
LDPLPAIRTLLDRSKSYELIRKIEAYMEGSPAPIPELDFHVHGQRALDLEEPEMGTTEDP
GLESRTGVCAWRTVAREPGSAFPGEVVRSRPPKGTGRDETDAGFSAKLLISTAVGTVDRA
AAPGILMRPPAQWLLDEIPHLVQVGLPQAFLQSFLKTSVPSQPTGTPPLGASVDGCCHCY
CGIYRTVIIQNYKNCVPTTPVALEVTGSPCSFADIHRAPVFSLHSLPVTRPFAALIAHSF
HCFVIVCWPLSSPPDRDSLEDRGECVFGDHDSAYGSLIPSINLSSHVHMCQRDGSY

>gi568815584f:92823360_93034881|GENSCAN_predicted_CDS_8|1791_bp
gccttccttagagaggccttggattcatttgccagtgctgctgtcacaaagggccacaaa
ctgggcagcttaaatagcagaaatgcacccctcccagttccggagctgaaccttagccgg
ccgatcgaggagcagggccccctggacgtcatcatccacaagctgactgacgtcatcctt
gaagccgaccagaatgatagccagtccctggagctggtgcacaggttccagggcatgtcc
cacgttgtgccctccagggcgtctgccctgccagtggccccaagtccattccacttgctg
aacactgtctccttgatcggactggagactgtgggaaaaacatgccctcagtgcagactc
accagccttgttgataagcaggaagtggaggcgtggaagcatgtgcagcttgtccacagg
gacccagcagagccgggggtcagtcttgactttctcagctggtgccgtgtgacgatgaga
ctgctggccagcagatgctacgggaggcagagttggacgcatctggcagccctggtccca
gagaaacagatcatgtcctgttctggggttgctgtgaggctgtgtgcccgtgataaagcc
cactgtgtctgcctttgtcttcatgtaataaatcccattgccacctcaccagccaagagc
acagccggccggattctcagtggcagcttagcaaagggccagttgtctctgttggcatca
ttccatgggcttggggcctctgaaaaccctgagagagcttgcgctgtaggtgggcaccgt
gacgctctgccccagagtccttatcagtgcggggcatggggccgccactcccagaggagc
cagtgcctggagtggatctgcttccgggagtacatcgatgcccaccctgagaccatcgtc
ctggacccgctccctgccatcagaaccctgcttgaccgctccaagtcctatgagctcatc
cggaagattgaggcctacatggaaggctccccggcccctattcctgagcttgactttcat
gtccatggccagagggccctggatctagaagaacctgaaatgggtaccactgaggaccct
ggcctggagagtaggactggggtatgtgcctggaggacagtggcccgggagcctggatca
gcttttcctggagaggttgtcaggtccaggcctcctaagggcactggcagagatgaaaca
gatgctggattctctgccaagctcctcatttccacagctgtgggcactgtggacagggca
gcagcccctggcatcctgatgcgccctccagctcagtggcttctggacgagataccccac
ttggtccaggtgggcctgccccaggccttcctgcagagctttctgaaaacctctgtcccc
tctcaacccacaggcacccctcctctaggagcatccgtggatgggtgttgccattgttac
tgtggtatttaccgaacagtcatcatacagaattataagaactgtgtcccaaccacccca
gttgccctagaagtgacaggatccccttgcagctttgcagacatccacagggcaccagtg
ttttctctccacagcttgcctgtcaccagaccctttgctgccctcatcgcacattcattc
cactgtttcgtcattgtctgctggccgctgtcttccccacctgaccgtgacagccttgag
gacaggggcgagtgtgtctttggggaccatgacagtgcttacggctcacttatcccatcc
atcaacttatcttcacacgtgcacatgtgccagagagatggttcttactga