GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:37:28

Sequence gi568815590r:99787508_99992021 : 204514 bp : 40.10% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4829   4882   54  1  0   84   67    60 0.493   4.83
 1.02 Intr +  21868  22023  156  0  0  104  111   155 0.999  18.69
 1.03 Intr +  30033  30296  264  2  0   77   36   189 0.929   9.39
 1.04 Intr +  30944  31027   84  1  0   67  101    28 0.559   1.10
 1.05 Intr +  31206  31381  176  2  2   65   74     6 0.544  -5.28
 1.06 Intr +  31905  32075  171  0  0   53   90   140 0.690   8.84
 1.07 Intr +  32414  32615  202  2  1   53   79   146 0.998   8.57
 1.08 Intr +  33787  33975  189  0  0   73  116   172 0.998  17.36
 1.09 Intr +  36089  36207  119  1  2   52   93    45 0.243  -0.26
 1.10 Intr +  42779  43037  259  2  1   73   27   208 0.432   9.74
 1.11 Intr +  44862  45145  284  2  2  105   68   127 0.932   7.69
 1.12 Intr +  47690  47817  128  2  2  101   95    65 0.997   7.90
 1.13 Intr +  48032  48235  204  0  0   71   44   131 0.695   5.25
 1.14 Intr +  56052  56286  235  1  1  100  -29   165 0.336   1.82
 1.15 Intr +  58040  58148  109  2  1  106   27   115 0.154   6.57
 1.16 Intr +  61269  61387  119  2  2   91   96   115 0.951  10.94
 1.17 Intr +  65944  66749  806  1  2  120  110   599 0.962  55.46
 1.18 Intr +  69906  70045  140  1  2   49   90    33 0.850  -1.14
 1.19 Intr +  70585  70785  201  0  0   99   86   122 0.875  11.66
 1.20 Intr +  71333  71486  154  1  1   38   36   128 0.579   1.32
 1.21 Intr +  71797  71973  177  2  0  121   69   146 0.999  14.97
 1.22 Intr +  74269  74439  171  2  0  122   87   205 0.999  22.79
 1.23 Intr +  75953  76206  254  0  2   81  114   107 0.538   8.83
 1.24 Intr +  78982  79167  186  0  0   52   27   134 0.613   2.66
 1.25 Intr +  79859  79950   92  1  2   79   83    74 0.767   3.87
 1.26 Intr +  80717  80958  242  2  2   59  115   273 0.803  23.37
 1.27 Intr +  83278  83380  103  2  1  108   58    80 0.995   5.31
 1.28 Intr +  83941  84190  250  1  1  108   94   299 0.986  29.02
 1.29 Term +  87911  88159  249  1  0   71   47   110 0.343  -0.08
 1.30 PlyA +  89899  89904    6                               1.05

 2.06 PlyA -  90381  90376    6                               1.05
 2.05 Term - 100111  99998  114  1  0   44   33   103 0.439  -2.01
 2.04 Intr - 104545 104401  145  0  1   72   95   124 0.857  10.86
 2.03 Intr - 106044 105723  322  1  1   34   44   249 0.375   9.09
 2.02 Intr - 106766 106606  161  1  2   67   80    59 0.811   1.71
 2.01 Init - 114544 114291  254  1  2   55   91   195 0.908  13.36
 2.00 Prom - 125295 125256   40                              -2.95

 3.03 PlyA - 125389 125384    6                               1.05
 3.02 Term - 130997 130927   71  0  2  102   43    29 0.185  -3.08
 3.01 Init - 140340 140220  121  0  1   68   74   110 0.439   8.00
 3.00 Prom - 147027 146988   40                              -5.25

 4.07 PlyA - 148501 148496    6                               1.05
 4.06 Term - 154865 154751  115  1  1   70   42    61 0.121  -3.24
 4.05 Intr - 158864 158746  119  2  2   39  109   120 0.260   7.54
 4.04 Intr - 177923 177828   96  2  0   45  115    60 0.024   3.69
 4.03 Intr - 190529 190410  120  2  0   43  100    59 0.308   2.37
 4.02 Intr - 194609 194430  180  2  0   98  110   113 0.988  13.64
 4.01 Init - 195989 195951   39  2  0   70   73    17 0.587  -1.36
 4.00 Prom - 196095 196056   40                              -1.65

 5.00 Prom + 201536 201575   40                              -6.65
 5.01 Sngl + 203746 204012  267  0  0   79   38   266 0.695  15.69
 5.02 PlyA + 204032 204037    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:99787508_99992021|GENSCAN_predicted_peptide_1|1925_aa
MTQMLALSDMYSKVSVSKLLHICIEGWGNWRWSEPFSVDHAGTFIRTIQYRGRTASLIIK
VQQLNGVQKQIIICGRQIICSYLSQSIELKVVQHYIGQDGQAVVREHFDCLTAKQKLPSY
ILENNELTELCVKAKGDEDWSRDVCLESKAPEYSIVIQVPSSNSSIIYVWCTVLTLEPNS
QVQQRMIVFSPLFIMRSHLPDPIIIHLEKRSLGLSETQIIPGKGQEKPLQNIEPDLVHHL
TFQAREEYDPSDCAVPISTSLIKQIATKVHPGGTVNQILDEFYGPEKSLQPIWPYNKKDS
DRNEQLSQWDSPMRVKLSIWKPYVRTLLIELLPWALLINESKWDLWLFEGEKIVLQVPAG
KIIIPPNFQEAFQIGIYWANTNTVHKSVAIKLVHNLTSPKWKDGGNGEVVTLDEEAFVDT
EIRLGAFPGHQKNSSKSNRAAKAPCCRLNTDRGQNISENERNAIKYSGEKQRDALLREEE
SREAFWLQRLCGAVVGSSQSELSGGFVYTVREKPPTQTSVMVDAPPPTKLEHPKSTSDCC
AGSENFKPVDLSLLGSLGYFRVPDSATFSICPGGEQPAMKSSSLPCWDLMPDISQSVLDA
SLLQKQIMLGFSPAPGADSSQCWSLPAIVRPEFPRQSVAVPLGNFRENGFCTRAIVLTYQ
EHLGVTYLTLSEDPSPRVIIHNRCPVKMLIKENIKDIPKFEVYCKKIPSECSIHHELYHQ
ISSYPDCKTKDLLPSLLLRVEPLDEVTTEWSDAIDINSQGTQVRQGNSNNPSTVEGGRMR
DIRQSLAYGSSECFLGTYCGVYTLAARNQLSLSTVSNPEGALTIVLQVPGSTFWEIFLGH
LKRLAQGGKQENPNKQAVSSFLLADVMLAEESRIATPNVVFLTGFGYVYVDVVHQCGTVF
ITVAPEGKAGPILTNTNRAPEKIVTFKMFITQLSLAVFDDLTHHKASAELLRLTLDNIFL
CVAPGAGPLPGEEPVAALFELYCVEICCGDLQLDNQLYNKSNFHFAVLVCQGEKAEPIQC
SKMQSLLISNKELEEYKEKCFIKLCITLNEGKSILCDINEFSFELKPARLYVEDTFVYYI
KTLFDTYLPNSRLAGHSTHLSGGKQVLPMQVTQHARALVNPVKLRKLVIQPVNLLVSIHA
SLKLYIASDHTPLSFSVFERGPIFTTARQLVHALAMHYAAGALFRAGTPLQPFRAKGNLL
FLYLQRRPSMEEYSTASPAPSPTLCSLSSQKKESLLVKEGWLPPSPVPTAFPLPGSEHQA
GEVSGFPEKAVFSDSSSPGPSLAPPILGAYSPKSPPQRARKFASPLRHAIEHLAAPGQAS
PPILVPPLSRGGFRENLPPANTCNPRRRPSSGWVVGSLDILGSPASLVRSIGNGVADFFR
LPYEGLTRGPGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMDRLSLDEEHYNRQ
EEWRRQLPESLGEGLRQGLSRLGISLLALIGASRQRERERPTPGLAGVWLSPPQPPTPFL
PEGSSLFPVRETPANAPFSVCKIVPDGKNQLCEESQISPDEVIFLGVGPVDRNLTPCHGT
QAFHFWGAAQIVLSVKATVTEAFTVARENGRAEQRGPHLIPACAGAGGCQHPVRLPQAQC
RRWMPCATAVGAELQGVLVAILSEEWSLSFSEDFKPLSLLRAFVIPGAIAGIVDQPMQNF
QKTSEAQASAGHKAKGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQR
HQPSDLHADQAPNSHVKYVWKMLQSLGRPEVHMALDVVLVRGSGQEHEGCLLLTSEVLFV
VSVSEDTQQQAFPVTEIDCAQDSKQNNLLTVQLKQPRVACDVEVDGVRERLSEQQYNRLV
DYITKTSCHLAPSCSSMQIPCPVVAAEPPPSTVKTYHYLVDPHFAQVFLSKFTMVKNKAL
RKGFP

>gi568815590r:99787508_99992021|GENSCAN_predicted_CDS_1|5778_bp
atgacccagatgttggcattatcggacatgtactctaaagtgtctgtgtcaaagctgtta
cacatctgtattgaaggttggggcaactggcgttggtcagagcctttcagtgtggaccat
gccgggacttttattagaacaattcagtacaggggtcgaactgcttctctcatcatcaag
gttcagcaactcaatggagtacaaaaacagattatcatctgtggaagacagatcatctgt
agttacttgtctcaaagcatagaactaaaagtcgttcagcattacattggtcaagatgga
caagctgtagttcgggaacattttgactgcctcacagccaaacagaaattgccttcgtac
atactagaaaacaatgaactgacggagctgtgtgtgaaggccaaaggagatgaagactgg
tcaagagatgtgtgcctggaatccaaagcccctgagtacagcattgtcattcaggtgcca
tcttcaaacagttccattatttatgtctggtgcacagttttgactttagaacccaactct
caagtgcaacaacgaatgattgtgttcagccctctttttatcatgaggagtcatcttcca
gaccccattatcatacatttggagaaaaggagtctgggattgagtgaaacacaaattatt
ccaggaaaagggcaggaaaaaccactgcaaaacatagaacctgaccttgtacatcacctg
acattccaagcaagagaagaatatgatccttcagattgtgcagttcccatctcaacatcc
ctcattaagcaaatagccactaaggtacaccctggaggcacagttaatcagatccttgac
gaattctatgggccagaaaagtcgcttcaacccatatggccctataataagaaggattct
gacaggaatgaacagctaagtcagtgggatagcccaatgcgagtgaagctgtcaatctgg
aagccatatgttagaactttgttgatagaacttctgccctgggccctgcttatcaatgaa
tccaaatgggacctctggctatttgaaggagagaaaattgttctacaggttcctgctggc
aaaattattattcctcctaattttcaggaagcttttcaaattggaatatactgggcaaat
acaaacactgtgcacaagtcagtagcaattaaactggtccataacctgacatctccaaag
tggaaagatggaggtaatggtgaagttgtgacactggatgaagaagcgtttgttgatact
gaaataagacttggtgcttttccaggacatcagaagaacagcagcaaaagtaacagggct
gctaaagcaccatgttgtaggctaaatactgacaggggccagaacatttctgagaatgaa
aggaacgccattaaatattctggggaaaaacaaagagatgccctgctcagagaggaggaa
tctagagaggcattctggctacagcggctttgcggggctgtggtgggctcttcccagtcc
gaactttctggaggctttgtttacactgtgagggagaaaccacctactcaaacctcagta
atggtggatgcccctcctcccaccaagctggagcatcccaagtcaacttcagactgctgt
gctggcagtgagaatttcaagccagtggatcttagcctgctgggctccctggggtatttt
cgtgttccagacagtgctacttttagcatttgcccaggtggagagcagcctgctatgaaa
tccagctcccttccttgctgggacttgatgcctgacatcagtcagtcagtactggatgca
tccctgcttcagaaacagatcatgctgggcttttctcctgccccaggtgctgacagctca
cagtgctggagcctgccagctatagttagaccagagtttcccagacagagtgtggcagta
cccctcgggaatttccgggaaaatggattctgtaccagggctatagtgctgacatatcaa
gaacacctcggagtgacttatttaaccctctcagaagaccctagtcctcgagtaattatc
cacaatagatgtccagtaaaaatgcttataaaggaaaacattaaagatattccaaagttt
gaggtttattgcaaaaaaattccctccgagtgctcaattcatcatgagctgtatcatcag
atttccagttatccggactgcaagaccaaagacttacttccaagcctacttttgagagtt
gaacctctagatgaagtaacaactgagtggagtgatgccattgacatcaacagtcaggga
acacaggtcagacagggtaacagtaataacccctccactgtggaagggggaagaatgaga
gacatacggcagtctcttgcctatggcagttctgaatgttttctgggcacatattgtggg
gtctataccctggcagcaagaaatcagctttcactgagcactgtttctaatcctgaagga
gctcttaccattgtccttcaggttcctggctccaccttctgggagatcttccttggacac
ttgaagaggctagcccagggtggcaagcaggaaaaccccaataagcaagctgtatcaagc
ttcttacttgctgatgtcatgttagctgaagaaagtcgcatagccacgcccaatgttgtg
ttcctgactggctttggctatgtgtatgtggatgttgtacatcagtgtggcacagtcttc
atcactgtggccccagaaggaaaagcaggacctattttaaccaataccaacagagcgcca
gagaagattgttacatttaaaatgttcatcactcagttaagcctggcagtgtttgatgac
ctcacccaccacaaagcatcagctgagcttctgagactcacactggacaacatttttctc
tgtgtggccccgggagctggtcccctccctggggaagagcctgtggctgcgttgtttgaa
ctttactgtgtggagatctgctgtggggacctgcagctagacaaccagctttataacaag
tccaatttccactttgctgtcttagtctgccagggagaaaaagcagaacccattcagtgt
tccaaaatgcagagtctcctcatatccaacaaagagttggaagaatacaaggaaaaatgt
tttatcaaactttgcatcaccttaaatgaaggcaagagcatcctctgtgatattaatgag
ttcagctttgaattaaaacctgctcggttatacgtggaagacacatttgtatactacatc
aagactttgtttgacacctaccttcctaacagcaggttggctggtcactccacacacctc
tccgggggtaaacaggtgttgcccatgcaggtcacacagcacgccagggccttggtgaat
cctgtgaagttacggaaactggtgatccagccagtaaatttgctcgtcagcatccacgct
tccctcaagctgtacatagcctcagaccacactcctctctccttctcggtgtttgaaaga
ggacccatcttcaccactgcgaggcagcttgtgcacgccctggcaatgcactatgccgct
ggggccctttttagagcaggtacacccttacagccattcagggctaaagggaatctgctg
tttctttacctccagagaaggccctccatggaggaatattccacagcctccccagctccc
tcgcctactctttgcagcctgagctcacagaagaaagagagcctgctggtgaaggaggga
tggctcccacccagtcctgtccccacagccttcccattaccgggctctgagcaccaggct
ggggaggtcagtggcttcccggagaaagctgtcttttcagactcctcctctcctgggccc
tcacttgcccctccaattcttggggcctacagccccaaatccccaccccagagagccagg
aagtttgcatcccctttgcgacatgccattgagcatctggccgcccctggccaggcatct
cctcctatcctggtgcctccgctgtcccggggaggctttagagagaacctcccacctgca
aacacctgcaacccaagaaggcgcccttcctcaggctgggtagttgggtctctggatatt
cttggcagccctgcaagcctggtgagaagcatcgggaacggggtcgccgacttcttcagg
cttccgtatgaggggctgacccggggccctggagccttcgtgagtggcgtctccagaggg
accacatcgtttgtaaagcacatctccaaaggtaccctcacatccatcaccaacctcgcc
acaagcctggcccggaacatggaccggctctcactggatgaggagcactacaaccggcag
gaggagtggcggcggcagctccccgagagcctgggcgaggggcttcgacagggcctgtcc
cggctgggcatcagcctgcttgcccttataggagcttctaggcaaagagagagagagaga
cccacccctgggctggctggtgtgtggctgtctccaccccaacccccgactcccttcctg
cccgagggttccagtctcttcccagtcagagaaaccccagccaatgctccgttttcagtg
tgtaagattgtacctgatgggaaaaatcagttgtgtgaggagtcacaaatcagccctgat
gaggtcatctttctgggcgtgggtcctgttgaccggaatctaacaccttgtcatgggact
caggctttccacttttggggggctgcccaaatagtcttatctgtcaaagccacagtaacc
gaagccttcactgtggccagagaaaacggaagagcagaacagagggggcctcacctgata
cctgcatgtgctggagcaggtggctgtcagcaccctgtgcggctgcctcaggctcagtgc
aggagatggatgccctgtgctacagctgtgggagcagagctccaaggggttttggtcgct
attctaagtgaggaatggagcctttcattttccgaggattttaagcctctgtccttactg
agggcttttgttattccaggtgcaattgctggtatagttgatcagccgatgcagaacttc
cagaaaacatctgaggcacaggcttcagcaggacacaaggccaagggtgtcatctcgggt
gtggggaaaggaatcatgggggtgttcacaaagcccatcggaggagctgctgagctggtg
tcacagactggctatggtattttacatggagctggactttctcagcttcccaaacagcgc
catcagccaagtgatctacatgctgaccaggctccaaacagccatgtcaaatatgtctgg
aaaatgcttcagtctctgggcagaccagaagtccacatggccctggacgtggttctggtg
aggggctcaggccaggagcatgaagggtgcttgctgctgacatcagaagtgctcttcgtg
gtgagtgtcagtgaggacacacagcagcaggccttccccgtcacagaaatcgactgtgca
caggacagcaagcagaacaacttactcacagtgcagctcaagcagccaagagtggcctgt
gatgtggaggtagatggagtccgagagagactgtcagagcaacagtacaacagactggtg
gactacatcacaaagacatcttgtcacctggcccccagctgttcttccatgcaaatacca
tgccctgtggtggctgcagaacctcccccctccactgttaaaacataccattacctggtt
gatccacattttgctcaggtcttccttagtaaatttaccatggtgaaaaataaagccctg
aggaaagggtttccttga

>gi568815590r:99787508_99992021|GENSCAN_predicted_peptide_2|331_aa
MKLDPFLTPYTKINPRWIKDLNVRPKTVKILEENLDNAIQDIGMGKDFMSKTPKAMATKA
KIDKWDLIKLKSFCTAKETIIRVNRLFQYKQPGIIKAQEPHPSTPLSTNFQLPSFKILVF
LRNPQKYRPSIKTSSALPVVTVCLRRGAASGLSRIYSLTLPLRPEGGRRADHGPGWVATA
PPKPGGLRDPREPSWLRSELARGWYPLRFFTAIVTLVRSFDLSGPGVSPVRKGVVVSNAA
GREAQGLAYVSRTVTTMAPEVLPKPRMRGLLARRLRNHMAVAFVLSLGVAALYKFRVADQ
RKKAYADFYRNYDVMKDFEEMRKAGIFQSVK

>gi568815590r:99787508_99992021|GENSCAN_predicted_CDS_2|996_bp
atgaaactggaccccttccttacaccttatacaaaaattaacccaaggtggattaaagac
ttaaacgtaagacctaaaaccgtaaaaatcctagaagaaaacctggacaatgccattcag
gacataggcatgggcaaagacttcatgtctaaaacaccaaaagcaatggcaacaaaagcc
aaaattgacaaatgggatcttattaaactaaagagcttctgcacagcaaaagaaactatc
atcagagtgaacaggttatttcaatacaaacagcctggcatcattaaggcacaagagcct
cacccttctacaccactttccacgaacttccagttgccttccttcaaaatccttgttttc
ttaagaaacccacaaaaataccgcccctctatcaaaacgtcctcagctttgccagtcgtg
actgtgtgtctccgccgtggtgcagcttcaggcctctcccgcatctactctctcacgctt
ccgctgcggcctgagggagggcggcgggcggaccacggaccggggtgggttgcgacggcc
ccaccgaagccgggtgggctgcgggaccctcgagaacccagctggcttcggagtgagctg
gcccggggctggtacccgctgcgctttttcacagccattgtgaccttggtgaggtcattt
gacctatctggccccggtgtttctcccgtgagaaaaggggtggtggtttctaatgcagct
ggtcgtgaggcgcaagggttagcatacgtatcaaggacagtaactaccatggctcccgaa
gttttgccaaaacctcggatgcgtggccttctggccaggcgtctgcgaaatcatatggct
gtagcattcgtgctatccctgggggttgcagctttgtataagtttcgtgtggctgatcaa
agaaagaaggcatacgcagatttctacagaaactacgatgtcatgaaagattttgaggag
atgaggaaggctggtatctttcagagtgtaaagtaa

>gi568815590r:99787508_99992021|GENSCAN_predicted_peptide_3|63_aa
MTLNEHAAFKHLFNKAHLAPPLIHLTLSGHSTCFREHRVGETSAPCVAQDGEAFHYNHSV
LQP

>gi568815590r:99787508_99992021|GENSCAN_predicted_CDS_3|192_bp
atgactcttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaaccctgagtggacacagcacgtgtttcagagagcaccgggttggg
gaaaccagtgctccctgtgttgcccaggatggagaggcttttcactacaatcatagtgta
ctgcagccttga

>gi568815590r:99787508_99992021|GENSCAN_predicted_peptide_4|222_aa
MAIIKRSENNSCLDLCHSHCDESVIQKKITTIINCFINSSIPPALQIDIPVEQAQKIIEH
RKELGPYVFREAQFCEFRKNLTDENIMSVLERRQEYNKQKKKLAVLEDEKSGKDGIKQYA
NTSVPAIKTALLSDSFLGLQPYGRQGASKVIGQCQSSAAKPRRSGKESVREPWARVPGAL
GVAARSHKAIDDCSVVSYGSSINPNMFTLFSFQLLQITIPRD

>gi568815590r:99787508_99992021|GENSCAN_predicted_CDS_4|669_bp
atggctattattaaacggtcagaaaataacagctgcttggacttgtgccattctcattgt
gatgagtctgtcatccagaagaagattacaactattatcaactgctttattaattccagt
attccaccagctttacaaattgacattccagtagagcaagcccagaagattattgaacac
cggaaggagttaggaccatatgtatttagagaggcacagttctgtgagtttaggaagaat
ttaacagatgaaaatattatgagtgttttagagagaagacaagaatataataagcagaaa
aaaaaattggcagtcctagaagacgaaaaatctggaaaggatggaatcaaacaatatgca
aatacttcagtgcctgctatcaaaactgctttactcagtgattccttcctaggcctccaa
ccatatggccgacagggggcttccaaggtgatcgggcagtgtcagtcttcagccgctaag
ccgagaagatctgggaaggagtcagtcagagagccttgggccagagttccaggggctctg
ggagtggctgccagatcacataaagccatagatgattgttcagtagtgagctatgggtcc
tccatcaacccaaatatgttcactctcttttcatttcagttattacagataacaatacca
agagattga

>gi568815590r:99787508_99992021|GENSCAN_predicted_peptide_5|88_aa
MDNDFDKLTEVGFRRLVITNFSELKEDVGTHRKEAKNLEKRLDEWLTRINSVEKILNDLM
ELKTMARELRDACTSFNSQFDQMEEGYQ

>gi568815590r:99787508_99992021|GENSCAN_predicted_CDS_5|267_bp
atggacaatgactttgacaagctgacagaagtaggcttcagaaggttggtaataacaaat
ttctctgagctaaaggaggatgttggaacccatcgcaaggaagctaaaaaccttgaaaaa
agattagatgaatggctaactagaataaacagtgtagagaagatcttaaatgacctgatg
gagctgaaaaccatggcacgagaacttcgcgacgcatgcacaagcttcaatagccaattc
gatcaaatggaagaagggtatcagtga