GENSCAN 1.0	Date run:  3-Nov-116	Time: 11:28:20

Sequence gi568815597r:20400693_20608024 : 207332 bp : 48.53% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2872   3070  199  2  1   80   76    81 0.461   4.51
 1.02 Intr +   5136   5205   70  0  1   59   51    58 0.502  -1.62
 1.03 Term +   5981   6103  123  1  0  115   49    35 0.603   0.68
 1.04 PlyA +   6451   6456    6                               1.05

 2.00 Prom +   6832   6871   40                              -1.86
 2.01 Init +  10851  10990  140  2  2   45   49   153 0.959   4.71
 2.02 Intr +  12477  12595  119  0  2   59   70    75 0.628   2.91
 2.03 Intr +  12613  12695   83  2  2   20  110    35 0.590  -1.74
 2.04 Intr +  12964  13095  132  0  0  110   55    62 0.761   5.94
 2.05 Intr +  31607  31741  135  1  0    1   94    86 0.010   1.26
 2.06 Intr +  41521  41577   57  0  0   68  110     9 0.004   0.18
 2.07 Term +  62726  63142  417  1  0  -43   38   996 0.983  76.78
 2.08 PlyA +  64049  64054    6                               1.05

 3.03 PlyA -  64931  64926    6                               1.05
 3.02 Term -  65071  65000   72  1  0  112   55    33 0.738   0.31
 3.01 Init -  66204  66145   60  0  0   98   72    56 0.579   6.40
 3.00 Prom -  79035  78996   40                              -3.96

 4.08 PlyA -  79513  79508    6                               1.05
 4.07 Term -  83027  82957   71  0  2  115   35   147 0.999  10.20
 4.06 Intr -  84840  84522  319  0  1   44   84   530 0.525  43.73
 4.05 Intr -  98170  98060  111  1  0   49   78    74 0.022   3.08
 4.04 Intr - 100727 100022  706  1  1  101   26  1031 0.031  89.66
 4.03 Intr - 101497 101377  121  2  1   24   76   145 0.907   6.45
 4.02 Intr - 102617 102530   88  2  1   98   95    34 0.998   4.64
 4.01 Init - 107332 107213  120  1  0  108   86   232 0.839  23.19
 4.00 Prom - 116734 116695   40                              -5.96

 5.00 Prom + 116882 116921   40                              -8.96
 5.01 Init + 120428 120434    7  1  1   61  114    10 0.226   1.37
 5.02 Intr + 122050 122118   69  2  0   62   58    80 0.108   1.55
 5.03 Term + 125643 126052  410  1  2  -70   42   443 0.096  19.28
 5.04 PlyA + 126125 126130    6                              -0.45

 6.02 PlyA - 126234 126229    6                               1.05
 6.01 Sngl - 133596 133366  231  0  0   82   37   165 0.361   5.91
 6.00 Prom - 144564 144525   40                              -3.56

 7.00 Prom + 148698 148737   40                              -4.06
 7.01 Init + 148786 148902  117  0  0   66   70    41 0.366   0.30
 7.02 Intr + 152189 152240   52  1  1   81  105    47 0.291   4.18
 7.03 Term + 152262 153271 1010  1  2   75   54  1845 0.527 172.07
 7.04 PlyA + 154294 154299    6                               1.05

 8.00 Prom + 171242 171281   40                              -3.26
 8.01 Init + 188438 188591  154  1  1  110   98   110 0.691  14.00
 8.02 Intr + 204236 204347  112  0  1   95  109   177 0.583  19.94

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 100727  99998  730  1  1  101   38  1058 0.965  95.05


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:20400693_20608024|GENSCAN_predicted_peptide_1|130_aa
XGCLDQDAQMRPVTSIPPEKPGRWTPSLLMEKLKPDRPRSLPKSQGKECQRENWTKSCPS
LDLSLPSTWMHMDLHFYTATCVQVYKPMHTEDICASSYQQLYKTTNPSSKEENTPWNEKP
PPARLALKSF

>gi568815597r:20400693_20608024|GENSCAN_predicted_CDS_1|393_bp
nttggatgtcttgaccaggatgcacagatgagacctgtgacatccatccccccagagaag
ccaggcaggtggacaccatcattgttgatggagaagctgaagccagacagacctagaagt
ttgcccaagtcccagggcaaggagtgccagcgtgagaactggaccaagtcatgtccctct
ctggacctcagtctccccagcacgtggatgcacatggatctgcatttttacacagctaca
tgtgtgcaggtgtacaagcccatgcacacagaggatatctgtgcctcaagctatcagcag
ttatacaagaccacaaacccaagtagcaaggaggaaaacacaccctggaatgagaagccc
cctcctgctcgtttagcacttaagagtttttga

>gi568815597r:20400693_20608024|GENSCAN_predicted_peptide_2|360_aa
MWLSWEASPSLPGAGGASCLQVDPSPIIPDDTVTQQLLNKGTISPDGGKTKIQCVQGLSK
VQLRAGGELGPVPRSQDAARAPSVTPWQASLAFDFPSHLASPALDANRTLPCTQPLSDAA
ALAGVTAHTMTRGLLHSHLEASDPGIKDPEGILGKEGNLPGETDTAVPENSFDKQGQQKR
GLVKALVLLSPSLEMPRRYFFLQVSKCIFPNLHKQVLVTIFQLLIFIIITTITTTIIIIT
TTNIITTITIIIITTTITTIITNIIITTTITISTNNSIITNIIITTITIISITISVTIIT
TIAIITTTTTTIIIIITIIITITTTTTIITTTITSTTTIIIIIIIIILFSPKTTLESGCC

>gi568815597r:20400693_20608024|GENSCAN_predicted_CDS_2|1083_bp
atgtggctgagttgggaagcctcaccctccctgcctggggctgggggagcttcctgtctg
caagttgacccttccccaatcatccctgatgacacagtcactcagcaactcctgaacaag
ggcaccatctccccagatggaggaaaaacgaagatccaatgtgtccaaggattgtccaag
gtccaactaagagctggtggcgagctgggaccagtgcccaggtctcaggatgctgcccgg
gcaccatctgtcactccttggcaggcctccctggcctttgactttcccagccacttggcc
agccctgctcttgatgccaaccgcaccctaccctgcacacagcctctctctgatgcagcc
gccctggccggggtcacagctcacaccatgacacggggcctcctgcacagccatcttgag
gcatctgacccaggaatcaaagacccagaagggattctggggaaagagggaaacctccca
ggggagactgatactgctgtccctgagaactcatttgacaagcaagggcagcaaaagcgt
ggcctagtaaaggccttggtgctcctgtccccttctctggaaatgcctaggagatacttc
ttcctccaggtctccaaatgcatctttcccaatcttcacaagcaagtccttgtaaccatt
ttccagctgttaatcttcatcatcattaccaccatcaccaccaccatcatcatcatcacc
accaccaacatcatcaccaccatcaccatcatcatcattaccaccaccatcaccaccatc
atcaccaacatcatcatcaccaccaccatcaccataagcaccaacaacagcatcatcacc
aacatcatcatcaccaccatcaccatcatcagcatcaccatttctgtcaccatcataacc
accatcgccataatcaccaccaccaccactaccataatcatcataattaccatcattatc
accatcaccaccaccaccaccattatcaccaccaccatcacaagcaccaccaccatcatc
atcatcatcatcatcatcatcttgtttagccccaaaaccaccttggaaagtggatgctgt
taa

>gi568815597r:20400693_20608024|GENSCAN_predicted_peptide_3|43_aa
MRTNWNPCLSLVTSNVDAAGTLGCPLLLGTCQPSAPKAPVPLR

>gi568815597r:20400693_20608024|GENSCAN_predicted_CDS_3|132_bp
atgaggacaaactggaacccgtgtctgtctctggtgacctccaacgtcgatgccgctggg
acccttggctgtcccctgcttttgggcacctgccagccgtcagcacctaaagctcctgtg
cctttaagatga

>gi568815597r:20400693_20608024|GENSCAN_predicted_peptide_4|511_aa
MESGGRPSLCQFILLGTTSVVTAALYSVYRQKARVSQELKGAKKVHLGEDLKSILSEAPG
KCVPYAVIEGAVRSVKETLNSQFVENCKGVIQRLTLQEHKMVWNRTTHLWNDCSKIIHQR
TNTVPFDLVPHEDGVDVAVRVLKPLDSVDLGLETVYEKFHPSIQSFTDVIGHYISGERPK
GIQETEEMLKVGATLTGVGELVLDNNSVRLQPPKQGMQYYLSSQDFDSLLQRQESSVRLW
KVLALVFGFATCATLFFILRKQYLQRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESLKS
ACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITRCGASEFLSANRNTHK
RCVPQVHRGELVATLEEQAKVGRRPPASRRRHRRSSPRAVPGRPPPAPAPLTLSAAGGDA
GGGGAAAEPPDATMSEVLPYGDEKLSPYGDGGDVGQIFSCRLQDTNNFFGAGQNKRPPKL
GQIGRSKRVVIEDDRIDDVLKNMTDKAPPGV

>gi568815597r:20400693_20608024|GENSCAN_predicted_CDS_4|1536_bp
atggagagcggagggcggccctcgctgtgccagttcatcctcctgggcaccacctctgtg
gtcaccgccgccctgtactccgtgtaccggcagaaggcccgggtctcccaagagctcaag
ggagctaaaaaagttcatttgggtgaagatttaaagagtattctttcagaagctccagga
aaatgcgtgccttatgctgttatagaaggagctgtgcggtctgttaaagaaacgcttaac
agccagtttgtggaaaactgcaagggggtaattcagcggctgacacttcaggagcacaag
atggtgtggaatcgaaccacccacctttggaatgattgctcaaagatcattcatcagagg
accaacacagtgccctttgacctggtgccccacgaggatggcgtggatgtggctgtgcga
gtgctgaagcccctggactcagtggatctgggtctagagactgtgtatgagaagttccac
ccctcgattcagtccttcaccgatgtcatcggccactacatcagcggtgagcggcccaaa
ggcatccaagagaccgaggagatgctgaaggtgggggccaccctcacaggggttggcgaa
ctggtcctggacaacaactctgtccgcctgcagccgcccaaacaaggcatgcagtactat
ctaagcagccaggacttcgacagcctgctgcagaggcaggagtcgagcgtcaggctctgg
aaggtgctggcgctggtttttggctttgccacatgtgccaccctcttcttcattctccgg
aagcagtatctgcagcggcaggagcgcctgcgcctcaagcagatgcaggaggagttccag
gagcatgaggcccagctgctgagccgagccaagcctgaggacagggagagtctgaagagc
gcctgtgtagtgtgtctgagcagcttcaagtcctgcgtctttctggagtgtgggcacgtt
tgttcctgcaccgagtgctaccgcgccttgccagagcccaagaagtgccctatctgcaga
caggcgatcacccggtgtggggccagtgaattcctcagtgctaacaggaacactcacaag
agatgtgttccccaagtccatagaggagaactggtggccacactagaggaacaggcaaaa
gttgggcggcgtcccccggcctctcgccggcgccaccgccgcagcagcccgcgggccgtc
cccggccggccgcccccggccccagcgccgctgaccctgtccgccgcgggcggggacgcg
ggcggaggaggcgccgcggcggagcccccggacgcgaccatgtcggaggtgctgccctac
ggcgacgagaagctgagcccctacggcgacggcggcgacgtgggccagatcttctcctgc
cgcctgcaggacaccaacaacttcttcggcgccgggcagaacaagcggccgcccaagctg
ggccagatcggccggagcaagcgggttgttattgaagatgataggattgatgacgtgctg
aaaaatatgaccgacaaggcacctcctggtgtctaa

>gi568815597r:20400693_20608024|GENSCAN_predicted_peptide_5|161_aa
MAASVPENDRNPVFIKEPAGHLKAAGGQVQIVQSEKNLAATKGIPHLVTNDAGTIRYPGP
LIKVNDIIQIDLDTGKSTDVIKFDTGNLWMVTGGANLGRIGVITNRERHPGSFDVVHVKD
ANSNSFATWLSSIFVIGKGNKTQGKGIHLTTAEETDKRLAA

>gi568815597r:20400693_20608024|GENSCAN_predicted_CDS_5|486_bp
atggcggcctccgttcctgagaacgacaggaaccccgtctttatcaaggagcctgctggt
cacctgaaagctgccggaggccaagtacaaattgtgcaaagtgagaaaaatcttgcggct
acaaaaggaatccctcatctggtaaccaatgatgctggcaccatccgctaccctggtccc
ctcatcaaggtgaatgacatcattcagattgatttggatactggcaagagtaccgatgtc
atcaagtttgatactggtaacctgtggatggtgactggaggtgcgaacctgggaagaatt
ggtgtgattaccaacagagagaggcaccctggatcttttgatgtggttcatgtgaaagat
gccaacagcaacagctttgccacctggctttccagcatttttgttattggcaagggcaac
aaaacccaaggaaagggtatccacctcaccactgctgaagagacagacaagagactggca
gcctaa

>gi568815597r:20400693_20608024|GENSCAN_predicted_peptide_6|76_aa
MVAQVKNFGINLNSSLSFIPFNQSRPIHISSISNCTRDLTRSHHVCCSYLVHATIISYVE
QCSNLLPTLPDLSRRP

>gi568815597r:20400693_20608024|GENSCAN_predicted_CDS_6|231_bp
atggttgctcaggtcaagaactttggcatcaatctcaactcttctctttccttcataccc
tttaaccagtccagacctattcacatcagctctatctccaactgcacccgagatctgact
cgttctcaccatgtctgctgctcctacctggtccacgctaccatcatctcttacgtggag
cagtgcagcaacctcctccctaccctaccggatctgtcccgcagaccctag

>gi568815597r:20400693_20608024|GENSCAN_predicted_peptide_7|392_aa
MGIEATSPGLRKVGQAPERVETFNVQHTCTYGHLISSLLGGGLLRAFPPPVSRQDAAPFA
AAAMLPWRRNKFVLVEDEAKCKAKSLSPGLAYTSLLSSFLRSCPDLLPDWPLERLGRVFR
SRRQKVELNKEDPTYTVWYLGNAVTLHAKGDGCTDDAVGKIWARCGPGGGTKMKLTLGPH
GIRMQPCERSAAGGSGGRRPAHAYLLPRITYCTADGRHPRVFAWVYRHQARHKAVVLRCH
AVLLARAHKARALARLLRQTALAAFSDFKRLQRQSDARHVRQQHLRAGGAAASVPRAPLR
RLLNAKCAYRPPPSERSRGAPRLSSIQEEDEEEEEDDAEEQEGGVPQRERPEVLSLAREL
RTCSLRGAPAPPPPAQPRRWKAGPRERAGQAR

>gi568815597r:20400693_20608024|GENSCAN_predicted_CDS_7|1179_bp
atgggaatagaagccacatcaccaggattaaggaaagtggggcaggctccagagagagta
gagaccttcaatgtgcagcacacatgtacctatggccacttgatctctagcctgctgggc
ggtggacttctgcgcgccttccctcccccggtctcccgacaggacgccgcccctttcgcc
gccgccgcgatgctgccctggagacgtaacaaattcgtgctggtggaggacgaggccaag
tgcaaggcgaagagcctgagtccggggctcgcctacacgtcgctgctctccagcttcctg
cgctcctgcccggacctgctgcccgactggccgctggagcgcttgggccgtgtgttccgc
agccggcgccagaaagtggagctcaacaaggaggacccgacctacaccgtgtggtacctg
ggcaacgccgtcaccctgcacgccaagggcgacggctgcaccgacgacgccgtgggcaag
atctgggctcgctgcgggcctggcgggggcactaagatgaagctgacgctggggccgcac
ggcatccgcatgcagccgtgcgagcgcagcgccgccgggggttcggggggccgcaggccg
gcgcacgcctacctgctgccgcgcatcacctactgcacggcggacgggcgccacccgcgc
gtcttcgcctgggtctaccgccaccaggcgcgccacaaggccgtggtgctgcgctgccac
gctgtgctgctggcgcgggcgcacaaggcgcgcgccctggcccgcctgctccgccagacc
gcgctggcggccttcagcgacttcaagcgcctgcagcgccagagcgacgcgcgccacgtg
cgccagcagcatctccgcgctgggggcgccgccgcctcggtgccccgcgccccactgcgc
cgcctgctcaatgccaagtgcgcctaccggccgccgccgagcgagcgcagccgcggggcg
ccgcgcctcagcagcatccaggaggaggacgaggaggaggaggaggacgacgcggaggag
caagagggaggagtcccccagcgcgagcggccggaggtgctcagcctggcccgggagctg
aggacgtgcagcctgcggggcgccccggcgcccccgccgcccgcgcagccccgccgctgg
aaggccggccccagggagcgggcgggccaggcgcgctga

>gi568815597r:20400693_20608024|GENSCAN_predicted_peptide_8|89_aa
MAQKRPACTLKPECVQQLLVCSQEAKKSAYCPYSHFPVGAALLTQEGRIFKGCNIENACY
PLGICAERTAIQKAVSEGYKDFRAIAIAS

>gi568815597r:20400693_20608024|GENSCAN_predicted_CDS_8|267_bp
atggcccagaagcgtcctgcctgcaccctgaagcctgagtgtgtccagcagctgctggtt
tgctcccaggaggccaagaagtcagcctactgcccctacagtcactttcctgtgggggct
gccctgctcacccaggaggggagaatcttcaaagggtgcaacatagaaaatgcctgctac
ccgctgggcatctgtgctgaacggaccgctatccagaaggccgtctcagaagggtacaag
gatttcagggcaattgctatcgccagn