GENSCAN 1.0	Date run:  5-Nov-116	Time: 02:12:04

Sequence gi568815588f:110398122_110610423 : 212302 bp : 44.58% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    295    491  197  2  2   39   96   100 0.545   5.03
 1.02 Intr +  10826  10941  116  1  2   88   89     7 0.268   0.05
 1.03 Intr +  13063  13378  316  1  1  114   11   144 0.222   5.37
 1.04 Intr +  52958  53072  115  1  1   36   67   194 0.914  12.12
 1.05 Intr +  61831  61856   26  2  2   67   97    17 0.090  -1.76
 1.06 Term +  64383  64529  147  2  0   69   43   100 0.092   1.50
 1.07 PlyA +  65302  65307    6                               1.05

 2.02 PlyA -  66188  66183    6                               1.05
 2.01 Sngl -  72285  71554  732  0  0   82   47   227 0.715  14.23
 2.00 Prom -  81568  81529   40                              -6.26

 3.00 Prom +  82169  82208   40                              -5.46
 3.01 Init +  94576  94589   14  0  2   99   96     2 0.389   1.82
 3.02 Intr +  99673 100379  707  1  2  105  105   948 0.969  89.30
 3.03 Intr + 104600 104748  149  0  2  100   98   172 0.977  19.35
 3.04 Intr + 108814 109033  220  0  1   81   74   239 0.984  19.67
 3.05 Term + 111899 112305  407  0  2  123   41   261 0.995  20.25
 3.06 PlyA + 112617 112622    6                               1.05

 4.08 PlyA - 113503 113498    6                               1.05
 4.07 Term - 133596 133571   26  1  2  129   54    -4 0.055  -1.31
 4.06 Intr - 141540 141444   97  0  1   74   86    37 0.289   1.68
 4.05 Intr - 145117 144963  155  2  2   43  102    59 0.297   2.59
 4.04 Intr - 146303 146213   91  2  1   29   94    51 0.189  -0.63
 4.03 Intr - 153397 153328   70  0  1  132   75    26 0.129   4.88
 4.02 Intr - 153952 153866   87  0  0  108   66    40 0.125   2.89
 4.01 Init - 161022 160976   47  0  2   77   81    13 0.223  -0.30
 4.00 Prom - 163589 163550   40                              -4.76

 5.00 Prom + 165055 165094   40                              -3.06
 5.01 Init + 169696 169710   15  0  0   71  110    -8 0.578   0.05
 5.02 Intr + 170817 170892   76  2  1   79  111    40 0.834   4.49
 5.03 Intr + 177215 177282   68  0  2   61   84    42 0.838  -0.28
 5.04 Intr + 179300 179371   72  1  0  102  100    69 0.997   9.10
 5.05 Intr + 179714 179793   80  1  2   57   87   107 0.909   5.85
 5.06 Intr + 180507 180585   79  0  1   42   93    42 0.880  -0.35
 5.07 Intr + 182783 182900  118  1  1   55   98    59 0.945   3.64
 5.08 Intr + 183802 183977  176  2  2   69   83   127 0.997   9.96
 5.09 Intr + 184441 184521   81  0  0   47   94    82 0.952   4.53
 5.10 Intr + 185263 185427  165  0  0   54  110   136 0.999  12.56
 5.11 Intr + 185720 185841  122  1  2   78   13   119 0.998   2.69
 5.12 Intr + 186062 186275  214  2  1   64   64   170 0.998  10.92
 5.13 Intr + 191484 191577   94  2  1   89    1   112 0.763   2.14
 5.14 Intr + 191771 191870  100  0  1   62   86   128 0.763   9.17
 5.15 Intr + 192870 193011  142  0  1   54   82    47 0.862   1.06
 5.16 Intr + 194952 195102  151  2  1   75   76    80 0.892   5.24
 5.17 Term + 198277 198452  176  2  2   77   40    87 0.815   0.72
 5.18 PlyA + 198664 198669    6                               1.05

 6.00 Prom + 198847 198886   40                              -2.86
 6.01 Init + 200116 200169   54  0  0   67   83    59 0.554   4.58
 6.02 Intr + 201548 201691  144  1  0  -10  111   113 0.577   4.28
 6.03 Intr + 202901 203009  109  1  1   83   63    45 0.975   1.36
 6.04 Intr + 203516 203763  248  0  2   64   77   240 0.999  17.68
 6.05 Intr + 203845 204057  213  0  0   72   91   193 0.999  16.91
 6.06 Intr + 204353 204470  118  1  1   70   69   112 0.865   7.54
 6.07 Intr + 204717 204881  165  1  0   80   92    75 0.921   7.03
 6.08 Intr + 205063 205169  107  2  2   61   86    64 0.908   3.43
 6.09 Term + 206110 206181   72  0  0   82   32    67 0.868  -1.59
 6.10 PlyA + 207416 207421    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 126617 126553   65  2  2   72  110    35 0.851   4.72


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:110398122_110610423|GENSCAN_predicted_peptide_1|305_aa
XALGEIFSGHQDSLPKLESLYLWARAMEVLEPSRKKSSKGFGSDLFQCASPQAKKGFSLQ
PGDGPQATNVPTQGAGMLLSSLIWDLTGLAPESAQVISGSPSGVFKLSSGLRLVGPKPRV
DSFILSGLNQAASGGTPGDPPALFGRRGGSQIRNHPGTMGPSYGSPHRWHHSPESGEYEL
REALSKVSKEENKMKELPYRALEEDKYLQVAAKLKEKYDKDVADSKSKGKFDGAKCPAEV
ARKKVEEEGTPGNAYTKMIDTKKAHVLRALTFNGEGSEPKQINKAIAKTEKCHEENASWW
CGTEG

>gi568815588f:110398122_110610423|GENSCAN_predicted_CDS_1|918_bp
naagccctgggagagatattctccgggcaccaggactcactgcccaagctcgagtcgctg
tacctctgggccagggcaatggaggtcctggaaccttccaggaaaaagagttcaaaaggt
tttggcagtgaccttttccagtgtgcttccccccaggcaaagaaaggtttttcactgcag
cctggggatgggcctcaggctactaatgttcccacacagggtgcagggatgctgctttcc
tctctgatatgggacctcactggactcgctcccgagtctgcccaagtcatctctggaagt
ccctcgggtgtcttcaagctttcttcaggcctgcggctggtgggccccaagccaagagtg
gattctttcatactctctggtctaaatcaagctgcatcaggtggcactcccggtgaccct
cctgccttatttggaagaagaggaggaagccagataagaaaccatccaggcaccatgggc
ccttcttatgggtcaccccacagatggcatcattctccagagagtggggaatatgagctc
cgagaggccctgagcaaggtgtcaaaggaagagaataaaatgaaggagctgccttatagg
gccctagaggaggacaaatatttgcaagtggcggcaaagctgaaggagaagtatgataag
gatgttgccgactctaagtcgaaaggaaagtttgatggtgcaaagtgtcctgctgaagtt
gcccggaaaaaggtggaagaggaaggaaccccaggaaatgcatacaccaagatgatcgat
accaaaaaggcccatgtgctcagggcattgacattcaatggagagggctcagagcccaaa
caaatcaacaaggcaatcgccaagactgagaaatgccatgaagaaaatgcatcctggtgg
tgtgggacggagggatag

>gi568815588f:110398122_110610423|GENSCAN_predicted_peptide_2|243_aa
MIVYLENPIVSAQNLLKLISNFSKVSEYKINVQKSQVFLYIINTQTESQIMSELPFTIAT
KRIKYLGIQLTRDVKHLFKENYKPLLNKIKEDTNKWKNIPCSWIGRINIMKMAILPKVIY
RFSAIPVKLPMTFFTELEKTTLKFIWNQKRARIAKTILSKKNKAGGITLPDFKLYYKATV
TKTAWYSYQNRDIDQWNRTEASEITPHIYNHLIFDKPNKNKKWGKDSFLTNGAGKTGYPY
LES

>gi568815588f:110398122_110610423|GENSCAN_predicted_CDS_2|732_bp
atgattgtatatttagaaaaccccatcgtctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcagaatacaaaatcaatgtgcaaaaatcacaagtattcctatac
atcattaacacacaaacagagagccaaatcatgagtgaactcccattcacaattgctaca
aagagaataaaatacctaggaatccaacttacaagggatgtgaagcacctcttcaaggag
aactacaaaccactgctcaacaaaataaaagaggacacaaacaaatggaagaatattcca
tgctcatggataggaagaatcaatatcatgaaaatggccatactgcccaaagtaatttat
agattcagtgccatccccgtcaagctaccaatgactttcttcacagaattggaaaaaact
actttaaagttcatatggaaccaaaaaagagcccgcattgctaagactatcctaagcaaa
aagaacaaagctggaggcatcacgttacctgacttcaaactatactacaaggctacagta
accaaaacagcatggtactcataccaaaacagagacatagaccaatggaacagaacagag
gcctcagaaataacaccacacatctacaaccatctgatctttgacaaacctaacaaaaac
aagaaatggggaaaggattcctttttaacaaatggtgctgggaaaactggctacccatat
ctagaaagctga

>gi568815588f:110398122_110610423|GENSCAN_predicted_peptide_3|498_aa
MALRGAWPRPEGRGNTHIWPYMGSRVTDGTHSHKTLRGRRNPRLLGRRAAGLAIERAGRE
RGVAPPLGRRAPSRPQPRGSPSRASPADTLAVDTLAVGTRGARGAGPLAGGGGGMKVTSL
DGRQLRKMLRKEAAARCVVLDCRPYLAFAASNVRGSLNVNLNSVVLRRARGGAVSARYVL
PDEAARARLLQEGGGGVAAVVVLDQGSRHWQKLREESAARVVLTSLLACLPAGPRVYFLK
GGYETFYSEYPECCVDVKPISQEKIESERALISQCGKPVVNVSYRPAYDQGGPVEILPFL
YLGSAYHASKCEFLANLHITALLNVSRRTSEACATHLHYKWIPVEDSHTADISSHFQEAI
DFIDCVREKGGKVLVHCEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGF
MGQLLQYESEILPSTPNPQPPSCQGEAAGSSLIGHLQTLSPDMQGAYCTFPASVLAPVPT
HSTVSELSRSPVATATSC

>gi568815588f:110398122_110610423|GENSCAN_predicted_CDS_3|1497_bp
atggctctaagaggggcgtggccacggcccgaggggcggggaaacacccatatttggcct
tatatgggcagccgcgtcacggacggcactcattcacataaaacgctgcgcggccggcgg
aatccccggcttctagggcggcgagcggccgggctggctatcgagcgagcggggcgggaa
cgcggagttgcgccgccgctcgggcgccgggctccgtcgcggccgcagccccgcgggtcg
ccctcccgtgcctcgcccgcggacaccctggccgtggacaccctggccgtgggcacccgc
ggggcgcgcggcgcggggccgctggccggcggcggcggcggcatgaaggtcacgtcgctc
gacgggcgccagctgcgcaagatgctccgcaaggaggcggcggcgcgctgcgtggtgctc
gactgccggccctatctggccttcgctgcctcgaacgtgcgcggctcgctcaacgtcaac
ctcaactcggtggtgctgcggcgggcccggggcggcgcggtgtcggcgcgctacgtgctg
cccgacgaggcggcgcgcgcgcggctcctgcaggagggcggcggcggcgtcgcggccgtg
gtggtgctggaccagggcagccgccactggcagaagctgcgagaggagagcgccgcgcgt
gtcgtcctcacctcgctactcgcttgcctacccgccggcccgcgggtctacttcctcaaa
gggggatatgagactttctactcggaatatcctgagtgttgcgtggatgtaaaacccatt
tcacaagagaagattgagagtgagagagccctcatcagccagtgtggaaaaccagtggta
aatgtcagctacaggccagcttatgaccagggtggcccagttgaaatccttcccttcctc
taccttggaagtgcctaccatgcatccaagtgcgagttcctcgccaacctgcacatcaca
gccctgctgaatgtctcccgacggacctccgaggcctgcgcgacccacctacactacaaa
tggatccctgtggaagacagccacacggctgacattagctcccactttcaagaagcaata
gacttcattgactgtgtcagggaaaagggaggcaaggtcctggtccactgtgaggctggg
atctcccgttcacccaccatctgcatggcttaccttatgaagaccaagcagttccgcctg
aaggaggccttcgattacatcaagcagaggaggagcatggtctcgcccaactttggcttc
atgggccagctcctgcagtacgaatctgagatcctgccctccacgcccaacccccagcct
ccctcctgccaaggggaggcagcaggctcttcactgataggccatttgcagacactgagc
cctgacatgcagggtgcctactgcacattccctgcctcggtgctggcaccggtgcctacc
cactcaacagtctcagagctcagcagaagccctgtggcaacggccacatcctgctaa

>gi568815588f:110398122_110610423|GENSCAN_predicted_peptide_4|190_aa
MKVFQQRRTTHLKALKALNLPSSLHLYIPEKEATQNLSALGQISRLGPEEDSEGWESVSG
KSSAYLTLQNLEGIVKSFVSETHGLQIRKLRPEKVACPASFTLASSEGSGSFERSSIFGT
YQQLDDAPAYVNPGHWEECSVSNAQVDQGKLVLIQSSLVLSCDSVAGFPDVAAGLVQDLQ
GRGLILSCGS

>gi568815588f:110398122_110610423|GENSCAN_predicted_CDS_4|573_bp
atgaaggtatttcagcagaggagaaccactcacctgaaggcactgaaggcactgaatttg
ccttcatccctgcatttgtacatcccagaaaaggaagccacacagaacttatcagccctg
ggccagatatccaggcttggtcctgaggaagatagtgaaggctgggaatccgtgtctggg
aagtcatcagcctaccttacactacaaaacctggaagggatcgtgaagagttttgtgtca
gagactcatggtctgcagataaggaaactcaggccagagaaagtggcttgcccagcctcc
ttcactctggcctccagtgaagggagtgggtcatttgaaagaagctctatctttggtaca
taccagcagctggatgatgccccagcatatgttaacccagggcattgggaggaatgttca
gtttccaatgctcaagttgaccaaggaaagttggtcctaatccagtcatccctggtgcta
tcttgtgacagtgtggctggttttccagatgtagctgcagggctggtccaagacctccaa
ggcaggggattgatcctttcctgtggaagctga

>gi568815588f:110398122_110610423|GENSCAN_predicted_peptide_5|642_aa
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIAIQFVLSDEFSHLRPEQRLALLHEGTGPRV
ISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRS
NPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELL
KYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSGEKS
RQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQ
DELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERT
DLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQ
YNKLDQDLNEVKARVEELDRKYYEVKNKKDELQTTCGEKRMQNSKHLLLKEKILKRSNNF
LEQQQERLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMI
SKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYD
TRKSRLELQKDVRKAEEELGELEAKLNENLRRNIENIFLFCA

>gi568815588f:110398122_110610423|GENSCAN_predicted_CDS_5|1929_bp
atgtacataaagcaggtgattatccagggttttcgaagttacagagatcaaacaattgta
gatcccttcagttcaaaacataatgtgattgcaattcagtttgttctcagtgatgagttt
agtcatcttcgtccagaacagcggttggctttattgcatgaaggtactggtcctcgtgtt
atttctgcttttgtggagattatttttgataattcagacaaccggttaccaatcgataaa
gaggaagtttcacttcgaagagttattggtgccaaaaaggatcagtatttcttagacaag
aagatggtcacgaaaaatgatgtgatgaacctccttgaaagcgctggtttttctcgaagc
aatccttattatattgttaaacaaggaaagatcaaccagatggcaacagcaccagattct
cagagattaaagctattaagagaagtagctggtactagagtgtatgacgaacgaaaggaa
gaaagcatctccttaatgaaagaaacagagggcaaacgggaaaaaatcaatgagttgtta
aaatacattgaagagagattacatactctagaggaagaaaaggaagaactagctcagtat
cagaagtgggataaaatgagacgagccctggaatataccatttacaatcaggaacttaac
gagactcgtgccaaacttgatgagctttctgctaagcgagagactagtggagaaaaatcc
agacaattaagagatgctcagcaggatgcaagagataaaatggaggatatcgaacgccaa
gttagagaattgaaaacaaaaatttcagctatgaaagaagaaaaagaacagcttagtgct
gaaagacaagagcagattaagcagaggactaagttggagcttaaagccaaggatttacaa
gatgaactagcaggcaatagtgaacaaaggaaacgtttattaaaagagaggcagaagctg
cttgaaaaaatagaagaaaagcagaaagaactggcagaaacagaacccaaattcaacagt
gtgaaagagaaagaagaacgaggaattgctagattggctcaagctacccaggaaagaacg
gatctttatgcaaagcagggtcgaggaagccagtttacatcaaaagaagaaagggataag
tggattaaaaaggaactcaagtctttagatcaggctattaatgacaagaaaagacagatt
gctgctatacataaggatttggaagacactgaagcaaataaagagaaaaatctggagcag
tataataaactggaccaggatcttaatgaagtcaaagctcgagtagaagaactggacaga
aaatattacgaagtaaaaaataagaaagatgaactacaaactacttgtggagagaagaga
atgcagaacagcaagcacttgctgctaaaagagaagatcttgaaaagaagcaacaacttc
ttagagcagcaacaggaaaggttattttatcacattgttgattcagatgaagtcagcacg
aagattttaatggagtttaataaaatgaatcttcctggagaggttacttttctgcctctt
aacaagttagatgtcagggatacagcctatcctgaaaccaatgatgctattcctatgatc
agcaaactgaggtacaatcccagatttgacaaagctttcaaacatgtgtttggaaagact
cttatttgtcgtagcatggaagtttcaacccagctggcccgtgctttcactatggactgt
attactttggaaggtgaccaagtcagccatcggggtgctctaactgggggttattatgac
acaaggaagtctcgacttgaattgcaaaaagatgttagaaaagcagaagaagaactaggt
gaacttgaagcaaagctcaatgaaaacctgcgcagaaatattgaaaatatctttttgttt
tgtgcatag

>gi568815588f:110398122_110610423|GENSCAN_predicted_peptide_6|409_aa
MKMLKEKRQQSEKTFMPKSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDE
IRQLQQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQK
SMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQT
LSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMN
VLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGKQGE
MREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELAVHA
QFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEMAKDFVEDDTTHG

>gi568815588f:110398122_110610423|GENSCAN_predicted_CDS_6|1230_bp
atgaagatgctaaaagagaagaggcagcagtcagagaaaaccttcatgcctaagagtttg
gaggcaagcttgcatgctatggagtctaccagagagtcattgaaagcagaactgggaact
gatttgctttctcaactgagtttggaagatcagaagagagtagatgcactgaatgatgag
attcgtcaacttcagcaggaacttaatgagctgagagagacagaagggggtactgttctc
acagccacaacatcagaacttgaagccatcaataaaagagtaaaagacactatggcacga
tcagaagatttggacaattccattgataaaacagaagctggaattaaggagcttcagaag
agtatggagcgctggaaaaatatggaaaaagaacatatggatgctataaatcatgatact
aaagaactggaaaagatgacaaatcggcaaggcatgctattgaagaagaaagaagagtgt
atgaagaaaattcgagaacttggatcacttccccaggaagcatttgaaaagtaccagaca
ctgagcctcaaacagttgtttcgaaaacttgagcagtgcaacacagaattaaagaagtac
agccatgttaacaaaaaggctttggatcagtttgtaaatttctccgagcagaaagaaaag
ttaataaagcgtcaagaagagttagataggggttacaaatcaatcatggaactgatgaat
gtacttgaacttcggaaatatgaagctattcagttaactttcaaacaggtatctaagaac
ttcagtgaagtattccagaagttagtacctggtggcaaagctactttggtgatgaagaaa
ggagatgtggagggcagtcagtctcaagatgaaggagaagggagtggaaaacaaggtgaa
atgagagaaatgcaacagctttcaggtggacagaaatccttggtagcccttgctctgatt
tttgccattcagaaatgtgacccggctccattttacttgtttgatgaaattgaccaggct
ctggatgctcagcacagaaaggctgtgtcagatatgattatggaacttgctgtacatgct
cagtttattacaactacttttaggcctgaactgcttgagtcagctgacaaattctatggt
gtaaagttcagaaataaggttagtcatattgatgtgatcacagcagagatggccaaagac
tttgtagaagatgataccacacatggttaa