GENSCAN 1.0	Date run:  5-Nov-116	Time: 02:02:25

Sequence gi568815576r:22414005_22615630 : 201626 bp : 43.85% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  13541  13586   46  1  1  109   91    24 0.885   3.65
 1.02 Intr +  13709  14005  297  0  0  108    3   158 0.477   6.15
 1.03 Intr +  18155  18522  368  0  2  112   84   199 0.720  16.77
 1.04 Term +  21976  22110  135  0  0   90   50    70 0.549   1.42
 1.05 PlyA +  22895  22900    6                               1.05

 2.05 PlyA -  24692  24687    6                               1.05
 2.04 Term -  27180  26890  291  0  0   33   45   131 0.041  -1.36
 2.03 Intr -  34290  34225   66  0  0  108   92    29 0.151   4.40
 2.02 Intr -  34739  34627  113  0  2   58   95    22 0.006  -0.00
 2.01 Init -  41580  41556   25  0  1   81   89    41 0.181   3.23
 2.00 Prom -  44502  44463   40                              -2.26

 3.03 PlyA -  46467  46462    6                               1.05
 3.02 Term -  48599  48327  273  2  0   88   43   131 0.227   4.07
 3.01 Init -  75394  73832 1563  1  0   49   48   422 0.072  26.78
 3.00 Prom -  75460  75421   40                              -3.86

 4.00 Prom +  86365  86404   40                              -4.06
 4.01 Init +  88752  88816   65  2  2   93   29    38 0.116  -0.98
 4.02 Intr +  93568  93691  124  1  1   99  -38    94 0.403  -1.51
 4.03 Term +  94515  94871  357  2  0   99   48   235 0.605  15.11
 4.04 PlyA +  95417  95422    6                               1.05

 5.02 PlyA -  95430  95425    6                               1.05
 5.01 Sngl - 101626  99998 1629  1  0   51   48   356 0.668  23.22
 5.00 Prom - 113346 113307   40                              -2.66

 6.07 PlyA - 113685 113680    6                               1.05
 6.06 Term - 134639 134063  577  1  1   96   37   291 0.896  18.74
 6.05 Intr - 136330 135722  609  0  0  131   94   515 0.985  47.93
 6.04 Intr - 137085 136763  323  0  2   95  110   321 0.976  29.66
 6.03 Intr - 143576 143541   36  2  0  113  111     5 0.541   3.76
 6.02 Intr - 145400 145264  137  0  2   98   54     9 0.021  -1.21
 6.01 Init - 156757 156625  133  1  1   78   47   103 0.849   5.50
 6.00 Prom - 167995 167956   40                              -6.36

 7.00 Prom + 168958 168997   40                              -7.26
 7.01 Init + 174209 174254   46  1  1  109   61   101 0.970   8.35
 7.02 Intr + 174377 174636  260  0  2   98    4   102 0.804  -0.02
 7.03 Intr + 180781 181077  297  0  0   70   50   227 0.296  14.17
 7.04 Term + 186983 187078   96  1  0  100   37    85 0.416   2.57
 7.05 PlyA + 191912 191917    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  75394  73763 1632  1  0   49   31   403 0.910  26.02
S.002 Init + 165838 165883   46  0  1  109   66    93 0.951   8.05


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576r:22414005_22615630|GENSCAN_predicted_peptide_1|281_aa
MAWTPLLLLLLSHCTGSLSQPVLTQPPSSSASPGESARLTCTLPSDINVGSYNIYWYQQK
PGSPPRYLLYYYSDSDKGQGSGVPSRFSGSKDASANTGILLISGLQSEDEADYYWSWAQS
VLTQPPSVSEAPRQRVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDR
FSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPTVLQAQGEQRQEPPSFSARRYNV
DYGFERVGFSYHKVCLFYVNFAKAFNHEVMLDFAKCFFCMH

>gi568815576r:22414005_22615630|GENSCAN_predicted_CDS_1|846_bp
atggcctggactcctcttcttctcttgctcctctctcactgcacaggttccctctcccag
cctgtgctgactcagccaccttcctcctccgcatctcctggagaatccgccagactcacc
tgcaccttgcccagtgacatcaatgttggtagctacaacatatactggtaccagcagaag
ccagggagccctcccaggtatctcctgtactactactcagactcagataagggccagggc
tctggagtccccagccgcttctctggatccaaagatgcttcagccaatacagggatttta
ctcatctccgggctccagtctgaggatgaggctgactattactggtcctgggcccagtct
gtgctgactcagccaccctcggtgtctgaagcccccaggcagagggtcaccatctcctgt
tctggaagcagctccaacatcggaaataatgctgtaaactggtaccagcagctcccagga
aaggctcccaaactcctcatctattatgatgatctgctgccctcaggggtctctgaccga
ttctctggctccaagtctggcacctcagcctccctggccatcagtgggctccagtctgag
gatgaggctgattattactgtgcagcatgggatgacagcctgaatggtcccacagtgctc
caggcccagggggaacagagacaagaacccccttccttttctgccaggaggtataatgtt
gactatgggtttgaaagagtgggcttttcttaccataaggtatgtctcttctatgtcaat
tttgcaaaggcttttaaccatgaagtgatgctggattttgccaagtgctttttctgcatg
cattga

>gi568815576r:22414005_22615630|GENSCAN_predicted_peptide_2|164_aa
MDTLFIRGGGMESVSTEENVFKYVSYLDKIIHSLENTVRLQVPAGKKIQDISQSVLYHSI
PAHVTHRATCSTIYLVLERNKYLVFTRVQGPLNQTYSRGHLCEGVGELKRPSWVQLWTLL
QVIVAVDVDFFVDVDWDGTIPATLDSDMGKGSRENRGMDQNQKQ

>gi568815576r:22414005_22615630|GENSCAN_predicted_CDS_2|495_bp
atggatacgctcttcatccgtggtggtggcatggagtcagtgtccacagaagaaaatgtc
tttaaatatgttagttacctggacaagattattcactccttagaaaatacagtaagatta
caagtcccagctggcaagaaaatacaagacatcagccagagtgtgctctaccacagcatc
ccagcccatgtcactcacagggcaacctgctccactatatacctggtgttagagaggaat
aaataccttgtgttcaccagggtccaggggccactcaaccagacctacagtagaggtcac
ctgtgtgaaggggtgggggagctgaagaggccctcttgggtacaactgtggactctgctt
caagtcatagtagctgtagatgtagacttctttgtagatgttgactgggatggaaccatc
cctgccactctggactcagacatgggcaaggggtccagggaaaacagaggcatggaccag
aatcagaagcaataa

>gi568815576r:22414005_22615630|GENSCAN_predicted_peptide_3|611_aa
MEQSCEEEKEPEPQKNIQETKQVDDEDAELIFVGVEHVNEDAELIFVGVTSNSKPVVSNI
LNRVTPGSWSRRKKYDHLRKDTARKLQPKSHETVTSEAVTVLPASQLESRSTDSPIIIEP
LSKPDYRNSSPQVVPNNSSELPSPLITFTDSLHHPVSTALSVGGINESPRVSKQLSTFEV
NSINPKRAKLRDGIIEGNSSASFPSDTFHTMNTQQSTPSNNVHTSLSHVQNGAPFPAAFP
KDNIHFKPINTNLDRANELAKTDILSLTSQNKTFDPKKENPIVLLSDFYYGQHKGEGQPE
QKTHTTFKCLSCVKVLKNVKFMNHVKHHLEFEKQRNDSWENHTTCQHCHRQFPTPFQLQC
HIENVHTAQEPSTVCKICELSFETDQVLLQHMKDHHKPGEMPYVCQVCHYRSSVFADVET
HFRTCHENTKNLLCPFCLKIFKTATPYMCHYRGHWGKSAHQCSKCRLQFLTFKEKMEHKT
QCHQMFKKPKQLEGLPPETKVTIQVSLEPLQPGSVDVASITKLTQLAEAQPQEIEPPLFN
PGNLVLVKTLTSLSFPKPSCEGPYTVLFQPPWQQKLQVSTSEYITLKSKPECLREQPLTA
QRNVLNIKVEK

>gi568815576r:22414005_22615630|GENSCAN_predicted_CDS_3|1836_bp
atggaacaatcatgtgaggaagagaaagagcctgaaccacagaagaacatacaagaaacc
aaacaagtagatgacgaagatgctgagctcatctttgttggtgtggaacatgtaaatgaa
gatgctgagctaatctttgttggggtgacttcaaattcaaaaccagtcgtttcaaacatt
ttgaacagagtcaccccgggttcatggtcaaggagaaaaaagtatgatcaccttagaaaa
gatactgctcgcaaattgcagcctaaaagtcatgagaccgttacatcagaagcagtgacc
gtcctgccagcttcccaacttgaatcgagatcaacagatagtcctattattattgagcct
ttgtctaaacctgattatagaaatagttcaccacaagttgtgcctaataactcttcagaa
ttaccttctcctttgattacattcacagattcattgcatcatccagtaagtacagcactt
tcagtaggaggtataaatgaaagtcctcgtgtatcaaagcaactttccactttcgaagta
aacagcataaatcccaaaagggctaaactcagggatggaattatagaaggaaattcttca
gcttcattcccttcagatacctttcatacaatgaatactcagcaaagtacaccctcaaat
aatgttcatacctcattaagccatgttcagaatggagcaccttttccagcagcttttcca
aaggacaatatccatttcaagcctataaatacaaatcttgatagggcaaatgaattggca
aaaacagacattttgagtctaacaagtcaaaacaagacctttgatcccaagaaagaaaat
cccattgtgttacttagtgacttttactatggacagcataaaggagaagggcagccggaa
cagaagactcacaccacctttaaatgcctcagctgcgtgaaagttctaaaaaatgttaag
tttatgaatcacgtgaagcatcatttggaatttgagaagcagaggaacgacagctgggaa
aaccacaccacctgccagcactgccaccggcagtttcccactcccttccagctacagtgt
cacatcgaaaatgtccacactgcccaggagccctctactgtctgtaaaatctgtgaattg
tcatttgaaacagatcaggtcctcttacaacacatgaaggaccatcataagcctggcgaa
atgccctatgtgtgccaggtttgccattatagatcgtcggtctttgctgatgtagaaaca
cattttagaacgtgccatgaaaacacaaagaatttgctttgtcccttttgtctcaaaatt
ttcaaaacagcaacaccatacatgtgtcattataggggccactggggaaagagtgcacac
cagtgttccaagtgccggctacagtttttaactttcaaggagaaaatggagcacaagacc
cagtgtcatcaaatgtttaagaagcctaagcaactagaaggattacctcctgaaacaaaa
gttactattcaagtgtcgctggaacctcttcagccaggatcagtggatgtagcatccata
actaaattgacacaactggcagaagcccagccccaggaaatagaaccacctttatttaac
ccaggaaatttggtactagtgaaaactctcacctctctctccttccctaagccaagctgc
gaagggccctacactgttctctttcaacccccttggcagcaaaagttacaggtgtcaact
tctgaatacatcacactcaagtcaaagcctgaatgcctgagggagcaacccctgacagcc
cagaggaacgtcctgaatatcaaagtggagaaatag

>gi568815576r:22414005_22615630|GENSCAN_predicted_peptide_4|181_aa
MGSMKKNERNIAGLKNGPQNIRDVVKECHYHPLLSQQSNLEGSRMTYINNWPELIKHIIQ
IPSKAAVLQRPLRQRTAKRGVATRRAAARHEIPQVSPQGTLKPRHAPVLTSPDQLLFASC
RPRTSPGGAPGAQPAATTPPQAPGAADAHASTRARPVETCDWLPGAGARSARLRARSMRA
L

>gi568815576r:22414005_22615630|GENSCAN_predicted_CDS_4|546_bp
atgggctcgatgaagaagaatgaaaggaatatagcaggtttgaaaaatggcccccaaaat
atcagagatgtggtaaaagaatgccactaccaccctctcctttctcaacaaagcaattta
gagggttcccgaatgacctacatcaacaattggcctgaactaatcaaacacatcattcag
attccctcaaaagcggctgtattgcaaaggccgctccggcagcgcacggccaagcgcggt
gtcgcgacccgcagggctgcggctcgccatgaaatccctcaagtctcccctcagggaacg
ctgaagccgcgccacgcccccgtccttaccagtccggatcagctgctgttcgcgagctgc
cggccacgcaccagccccggaggcgctcccggggcacagccggcggcgactacgcctcct
caggcccccggcgccgccgacgcgcacgcctccacacgcgcgcgtccagtggagacctgc
gattggctgccaggtgccggcgcgagatcggcgcggctccgagctaggagcatgcgcgcg
ctctga

>gi568815576r:22414005_22615630|GENSCAN_predicted_peptide_5|542_aa
MGDIFLCKKVESPKKNLRESKQREEDDEDPDLIYVGVEHVHRDAEVLFVGMISNSKPVVS
NILNRVTPGSNSRRKKGHFRQYPAHVSQPANHVTSMAKAIMPVSLSEGRSTDSPVTMKSS
SEPGYKMSSPQVVSPSSSDSLPPGTQCLVGAMVSGGGRNESSPDSKRLSTSDINSRDSKR
VKLRDGIPGVPSLAVVPSDMSSTISTNTPSQGICNSSNHVQNGVTFPWPDANGKAHFNLT
DPERASESALAMTDISSLASQNKTFDPKKENPIVLLSDFYYGQHKGDGQPEQKTHTTFKC
LSCVKVLKNIKFMNHMKHHLEFEKQRNDSWEDHTTCQHCHRQFPTPFQLQCHIDSVHIAM
GPSAVCKICELSFETDQVLLQHMKDHHKPGEMPYVCQVCHYRSSVFADVETHFRTCHENT
KNLLCLFCLKLFKTAIPYMNHCWRHSRRRVLQCSKCRLQFLTLKEEIEHKTKDHQTFKKP
EQLQGLPSETKVIIQTSVQPGSSGMASVIVSNTDPQSSPVKTKKKTAMNTRDSRLPCSKD
SS

>gi568815576r:22414005_22615630|GENSCAN_predicted_CDS_5|1629_bp
atgggagatatctttttgtgtaagaaagtggaatcaccaaagaagaatttgagagaatcc
aaacaaagggaggaggatgatgaagatccagatctgatctatgttggggtggagcatgta
catagagatgctgaagttctctttgtcgggatgatttcaaattcaaaaccagtcgtttca
aacattttgaacagagtcaccccaggctcaaattcaagaagaaagaaaggccacttccgt
caatatcctgctcacgtgtcgcagcctgcaaatcatgtgacctctatggcaaaagccatc
atgccggtttctctgtctgaggggcgatcgacagatagtcctgtcactatgaagtcttca
tctgaacctggttataaaatgagctcaccacaagttgtttctcccagttcctcagactcg
ctccccccagggactcagtgtctagttggagctatggtctctggaggaggcagaaatgag
agttctcctgattcaaagcgactttccacttcagatataaacagcagagattccaaaagg
gttaaactcagggatggaatcccaggggtaccttctttagctgtggtcccttcagatatg
tcttctacaataagcacaaatacaccctcacaggggatctgcaactcatcaaaccatgtt
cagaatggagtaacatttccttggcctgatgctaatggaaaggcacatttcaatcttaca
gatccagagagagcaagtgagtctgccctggcaatgacagacatttcaagtctagcaagt
caaaacaagacctttgatcccaagaaagaaaatcccatcgtgttacttagcgacttttac
tatggacagcataaaggagatgggcagccggaacagaagactcacaccacctttaaatgc
ctcagctgcgtgaaagttctaaaaaatattaagtttatgaatcacatgaagcatcatttg
gaatttgagaagcagaggaacgacagctgggaagaccacaccacctgccagcactgccac
cggcagtttcccactcccttccagctacagtgtcacattgatagtgtacacatcgccatg
gggccctctgctgtctgtaaaatctgtgaattgtcatttgaaacagatcaggtcctctta
caacacatgaaggaccatcataagcctggcgaaatgccttatgtgtgccaggtttgccat
tacagatcgtcggtctttgctgatgtggaaacacattttagaacgtgccatgaaaacaca
aagaatttgctttgtctgttttgtctcaaacttttcaaaactgcaataccatacatgaat
cattgttggaggcacagcagaaggagggtccttcagtgttccaagtgccggctacagttt
ttgacgttgaaggaggaaatagagcacaaaaccaaggaccatcaaacatttaaaaagccg
gagcaactgcaagggttgcctagtgaaacaaaagttattattcaaacttcagttcagcca
ggatcaagtggtatggcttccgttattgttagcaacactgaccctcagtcttctcctgta
aaaactaaaaagaagacggctatgaacactagagattccagactcccttgcagcaaggat
tctagctga

>gi568815576r:22414005_22615630|GENSCAN_predicted_peptide_6|604_aa
MEHYAAIKIDEFMSFVGTWMKLETIILSKLSQGRKTKHRMFSLIGKDPPHLCRSLTIPLE
GLGGSGFCIQSLLTLVPPAGPRREFRRGFRQLRGVVNSLRKNGSIQSRYISMSVWTSPRR
LVELAGQSLLKDEALAIAALELLPRELFPPLFMAAFDGRHSQTLKAMVQAWPFTCLPLGV
LMKGQHLHLETFKAVLDGLDVLLAQEVRPRRWKLQVLDLRKNSHQDFWTVWSGNRASLYS
FPEPEAAQPMTKKRKVDGLSTEAEQPFIPVEVLVDLFLKEGACDELFSYLIEKVKRKKNV
LRLCCKKLKIFAMPMQDIKMILKMVQLDSIEDLEVTCTWKLPTLAKFSPYLGQMINLRRL
LLSHIHASSYISPEKEEQYIAQFTSQFLSLQCLQALYVDSLFFLRGRLDQLLRHVMNPLE
TLSITNCRLSEGDVMHLSQSPSVSQLSVLSLSGVMLTDVSPEPLQALLERASATLQDLVF
DECGITDDQLLALLPSLSHCSQLTTLSFYGNSISISALQSLLQHLIGLSNLTHVLYPVPL
ESYEDIHGTLHLERLAYLHARLRELLCELGRPSMVWLSANPCPHCGDRTFYDPEPILCPC
FMPN

>gi568815576r:22414005_22615630|GENSCAN_predicted_CDS_6|1815_bp
atggaacactatgcagccataaaaattgatgagttcatgtcctttgtagggacatggatg
aagctggaaaccatcattctcagcaaactgtcacaaggacgaaaaaccaaacaccgcatg
ttctcactcataggaaaggatcctccccatctctgcagaagcctgaccatccccctagag
ggcctgggaggaagtgggttttgcatacagtccctgttgactctagtgccccctgctggc
cccagacgcgagttccggcgaggcttcaggcaacttcgcggtgtggtgaactctctgagg
aaaaacggttccattcagagccgatacatcagcatgagtgtgtggacaagcccacggaga
cttgtggagctggcagggcagagcctgctgaaggatgaggccctggccattgccgccctg
gagttgctgcccagggagctcttcccgccactcttcatggcagcctttgacgggagacac
agccagaccctgaaggcaatggtgcaggcctggcccttcacctgcctccctctgggagtg
ctgatgaagggacaacatcttcacctggagaccttcaaagctgtgcttgatggacttgat
gtgctccttgcccaggaggttcgccccaggaggtggaaacttcaagtgctggatttacgg
aagaactctcatcaggacttctggactgtatggtctggaaacagggccagtctgtactca
tttccagagccagaagcagctcagcccatgacaaagaagcgaaaagtagatggtttgagc
acagaggcagagcagcccttcattccagtagaggtgctcgtagacctgttcctcaaggaa
ggtgcctgtgatgaattgttctcctacctcattgagaaagtgaagcgaaagaaaaatgta
ctacgcctgtgctgtaagaagctgaagatttttgcaatgcccatgcaggatatcaagatg
atcctgaaaatggtgcagctggactctattgaagatttggaagtgacttgtacctggaag
ctacccaccttggcgaaattttctccttacctgggccagatgattaatctgcgtagactc
ctcctctcccacatccatgcatcttcctacatttccccggagaaggaagagcagtatatc
gcccagttcacctctcagttcctcagtctgcagtgcctgcaggctctctatgtggactct
ttatttttccttagaggccgcctggatcagttgctcaggcacgtgatgaaccccttggaa
accctctcaataactaactgccggctttcggaaggggatgtgatgcatctgtcccagagt
cccagcgtcagtcagctaagtgtcctgagtctaagtggggtcatgctgaccgatgtaagt
cccgagcccctccaagctctgctggagagagcctctgccaccctccaggacctggtcttt
gatgagtgtgggatcacggatgatcagctccttgccctcctgccttccctgagccactgc
tcccagcttacgaccttaagcttctacgggaattccatctccatatctgccctgcagagt
ctcctgcagcacctcatcgggctgagcaatctgacccacgtgctgtatcctgtccccctg
gagagttatgaggacatccatggtaccctccacctggagaggcttgcctatctgcatgcc
aggctcagggagttgctgtgtgagttggggcggcccagcatggtctggcttagtgccaac
ccctgtcctcactgtggggacagaaccttctatgacccggagcccatcctgtgcccctgt
ttcatgcctaattag

>gi568815576r:22414005_22615630|GENSCAN_predicted_peptide_7|232_aa
MAWALLLLTLLTQGTGSWAQSALTQPPFVSGAPGQSVTISCTGTSSDVGDYDHVFWYQKR
LSTTSRLLIYNVNTRPSGISDLFSGSKSGNMASLTISGLKSEVPAVSVALGQMARITCQG
DSMEGSYEHWYQQKPGQAPVLVIYDSSDRPSRIPERFSGSKSGNTTTLTITGAQAEDEAD
YYYQLIDNHATQLTVTQADGKWYQYGPHDGSSIPANLGLHTADCGWSQNPKC

>gi568815576r:22414005_22615630|GENSCAN_predicted_CDS_7|699_bp
atggcctgggctctgctcctcctcaccctcctcactcagggcacagggtcctgggcccaa
tctgccctgactcagcctccttttgtgtccggggctcctggacagtcggtcaccatctcc
tgcactggaaccagcagtgacgttggggattatgatcatgtcttctggtaccaaaagcgt
ctcagcactacctccagactcctgatttacaatgtcaatactcggccttcagggatctct
gacctcttctcaggctccaagtctggcaacatggcttccctgaccatctctgggctcaag
tccgaggtgcctgcagtgtctgtggccttgggacaaatggccaggatcacctgccaggga
gacagcatggaaggctcttatgaacactggtaccagcagaagccaggccaggcccccgtg
ctggtcatctatgatagcagtgaccggccctcaaggatccctgagcgattctctggctcc
aaatcaggcaacacaaccaccctgaccatcactggggcccaggctgaggatgaggctgat
tattactatcagttgatagacaaccatgctactcaactcacagtgacacaggcagatgga
aaatggtaccagtacggtcctcatgacggttcatctatacctgccaatctaggcctccac
actgccgactgtggatggtcacagaacccaaaatgctaa