GENSCAN 1.0	Date run:  5-Nov-116	Time: 01:31:04

Sequence gi568815575r:41575760_41776494 : 200735 bp : 39.36% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   1956   2062  107  1  2   89   48   136 0.800   7.29
 1.02 PlyA +   2147   2152    6                              -1.75

 2.09 PlyA -   2338   2333    6                              -0.45
 2.08 Term -   2414   2400   15  2  0  108   47     5 0.512  -4.34
 2.07 Intr -   2769   2581  189  0  0   52  115   167 0.442  14.66
 2.06 Intr -  11228  11148   81  2  0   99  115    19 0.955   4.62
 2.05 Intr -  13833  13756   78  0  0   84  107    54 0.975   5.73
 2.04 Intr -  34266  34145  122  1  2  109   95    39 0.951   5.99
 2.03 Intr -  50944  50845  100  1  1  107   91    73 0.924   8.26
 2.02 Intr -  60902  60819   84  2  0   65   94   100 0.964   7.40
 2.01 Init -  68452  67598  855  1  0   43   25   390 0.012  22.87
 2.00 Prom -  71684  71645   40                              -7.75

 3.00 Prom +  71842  71881   40                              -3.05
 3.01 Init +  79682  80046  365  1  2   39  116   314 0.585  25.87
 3.02 Term +  81103  81157   55  1  1   97   41    34 0.598  -4.35
 3.03 PlyA +  81417  81422    6                               1.05

 4.04 PlyA -  84360  84355    6                               1.05
 4.03 Term -  84802  84626  177  1  0  110   48   140 0.867   8.90
 4.02 Intr -  89693  89518  176  0  2   36   90   114 0.962   5.14
 4.01 Init -  91362  91239  124  0  1   77   82    77 0.985   6.38
 4.00 Prom -  97450  97411   40                              -6.15

 5.02 PlyA -  98116  98111    6                               1.05
 5.01 Sngl - 100735  99998  738  1  0   82   41   695 0.879  60.16
 5.00 Prom - 116506 116467   40                              -5.75

 6.00 Prom + 116570 116609   40                              -6.15
 6.01 Sngl + 119896 121020 1125  0  0   75   51   141 0.527   5.50
 6.02 PlyA + 121493 121498    6                               1.05

 7.00 Prom + 123835 123874   40                              -4.15
 7.01 Init + 131539 131602   64  0  1   65   94    43 0.132   3.99
 7.02 Intr + 136119 136229  111  1  0   54   87    41 0.010   0.03
 7.03 Intr + 139180 139342  163  2  1   83  116   138 0.069  14.21
 7.04 Intr + 143538 143574   37  0  1   60   67    54 0.757  -2.15
 7.05 Term + 143831 144079  249  1  0   74   49   245 0.926  13.92
 7.06 PlyA + 144235 144240    6                               1.05

 8.05 PlyA - 144270 144265    6                               1.05
 8.04 Term - 146611 146462  150  1  0   38   47   134 0.008   1.23
 8.03 Intr - 163697 163625   73  1  1   82  115    54 0.882   5.99
 8.02 Intr - 169842 169765   78  2  0   69   91   108 0.172   6.95
 8.01 Intr - 172979 172869  111  1  0  118   78     9 0.040   1.48

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  68452  67523  930  1  0   43   39   412 0.849  27.98


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:41575760_41776494|GENSCAN_predicted_peptide_1|35_aa
XNIKEPFLDLLSLREFYENGGKVQHQFSSSSTPKH

>gi568815575r:41575760_41776494|GENSCAN_predicted_CDS_1|108_bp
nttaacatcaaggagcctttccttgatcttctcagtctacgagaattctatgagaatgga
ggcaaggttcagcatcaattctcttccagctctactcccaagcactga

>gi568815575r:41575760_41776494|GENSCAN_predicted_peptide_2|507_aa
MNINAKILNKILVNRIQQHIKKLIHHDQVSFIPGMQGWFNICKSINIIHHINRTNNKNHM
ITSIDAEKAFDKIQQRFMLKTLNKLGIDGTYLKIVRAIYDKPTANIILNGQKLEAFPLKT
GTRQECPLSPLLFNIVLEVLARAIRQEKEIKGIRLGKEEVKLSLFADDMIVYLENPIISA
QNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQIESQIMSELPFTIASKRIKYLGIQLTK
DVKDLFKESYKPLLNEINEDTNKWKNIPCLWIGRINIMKMAILPKERDRYAYKIHLPETV
EQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSEDPTSSGAVSQVLDSLEEIH
ALTDCSEKDLDFLHSVFQDQHLHTLLDLYDKINTKSSPQIRNPPSDAVQRAKEVLEEISC
YPENNDAKELKRILTQPHFMALLQTHDVVAHEVYSDEALRVTPPPTSPYLNGDSPESANG
DMDMENVTRVRLVQFQKNTDEPMNCSA

>gi568815575r:41575760_41776494|GENSCAN_predicted_CDS_2|1524_bp
atgaacatcaatgcaaaaatcctcaataaaatactggtaaaccgaatacagcagcacatc
aaaaagcttatccaccacgatcaagtcagcttcatccctgggatgcaaggctggttcaac
atatgcaaatcaataaacataatccatcatataaacagaaccaacaacaaaaaccacatg
attacctcaatagatgcagaaaaggcctttgacaaaattcaacagcgcttcatgctaaaa
actctcaataaactaggtattgatggaacttatctcaaaatagtaagagctatttatgac
aaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaact
ggcacaagacaggaatgccctctctcaccactcctattcaacatagtgttggaagttctg
gccagggcaatcaggcaagagaaagaaataaaaggtattcgattaggaaaagaggaagtc
aaattgtccctgtttgcagatgacatgattgtatatttagaaaaccccatcatctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaaatcacaagcattcctatacaccaataacagacaaatagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaaag
gatgtgaaggacctcttcaaggagagctacaaaccactgctcaatgaaataaatgaggac
acaaacaaatggaagaatattccatgcttatggataggaagaatcaatatcatgaaaatg
gccatactgcccaaagagcgggatcgttacgcctacaagattcatcttccagaaacagta
gagcagctgaggaaattcaatgcaaggaggaaactaaagggtgcagtactagccgctgtg
tcaagtcacaaattcaactcattctatggggatccccctgaagagttaccagatttctcc
gaagaccctacctcctcaggagcagtctcacaggtgctggacagcctggaagagattcat
gcgcttacagactgcagtgaaaaggacctagattttctacacagtgttttccaggatcag
catcttcacacactactagatctgtatgacaaaattaacacaaagtcttcaccacaaatc
aggaatcctccaagcgatgcagtacagagagccaaagaggtattggaagaaatttcatgt
taccctgagaataacgacgcaaaggaactaaagcgtattttaacacaacctcatttcatg
gccttacttcagactcacgacgtagtggcacatgaagtttacagtgatgaagcattgagg
gtcacacctcctcccacctctccctatttaaacggcgattctccagaaagtgctaacgga
gacatggatatggagaatgtgaccagagttcggctggtacagtttcaaaagaacacagat
gaaccaatgaattgttctgcctga

>gi568815575r:41575760_41776494|GENSCAN_predicted_peptide_3|139_aa
MTEGHKMILTPEIPMLSHMMSEKHSNGDGSAQNSSIIKWKWFMQEHPLREVQGGNILKQG
ASFPLGLTLELCEELWDSTDTWTGPREQLSTDQRRAAWCVDDSSKVNRQHPVWKDATLDQ
RSGSRTRAITTSVRTRDDS

>gi568815575r:41575760_41776494|GENSCAN_predicted_CDS_3|420_bp
atgactgaaggacataaaatgatcttgacacctgaaatacccatgctttctcacatgatg
tcagagaaacattcaaatggggatggcagcgcccagaatagttccataataaaatggaaa
tggtttatgcaggaacatcctctccgggaagtgcaaggaggaaacatcctcaagcaggga
gcctcttttcccctaggactgactctggaactgtgtgaggaactgtgggattctactgac
acttggacagggccccgtgaacagctctcaactgaccaacgaagagctgcttggtgtgtg
gatgacagttccaaggtgaatcgacagcatcctgtttggaaggatgccactcttgatcaa
agaagtggttctaggaccagagccataactaccagtgttagaaccagggatgattcctaa

>gi568815575r:41575760_41776494|GENSCAN_predicted_peptide_4|158_aa
MAGTGHGRSDYSQVKAPILSGLAQEVVGVKLSFKASSKLSAGRVGTPHFMAPEVVKREPY
GKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRM
LMLDPAERITVYEALNHPWLKVHEHSQVTFYTLSEHFQ

>gi568815575r:41575760_41776494|GENSCAN_predicted_CDS_4|477_bp
atggctgggactggccatggtcgctctgattattcccaagttaaggcccccattttgagt
ggcttggcccaggaagtggtaggagtcaagttgagtttcaaagcatcatccaaactgtca
gcaggacgtgttggaacacctcattttatggcaccagaagtggtcaaaagagagccttac
ggaaagcctgtagacgtctgggggtgcggtgtgatcctttttatcctgctcagtggttgt
ttgcctttttacggaaccaaggaaagattgtttgaaggcattattaaaggaaaatataag
atgaatccaaggcagtggagccatatctctgaaagtgccaaagacctagtacgtcgcatg
ctgatgctggatccagctgaaaggatcactgtttatgaagcactgaatcacccatggctt
aaggtacatgagcattcacaggtcaccttctacactttgtctgaacacttccagtga

>gi568815575r:41575760_41776494|GENSCAN_predicted_peptide_5|245_aa
MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVLGARRSSWR
VVSSIEQKTEGAEKKQQMAREYREKVDTELRDICNDVLFLLEKFLIPSASQAESKVFSLK
MKGDYYHYLAEVATGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRPGLALNFSVFYYE
ILNSPEKACSLAKTAFDEAIAELDTLIEESYKDSMLIMQLLRDNLTLWTSDTQGDEAEAG
EGGEN

>gi568815575r:41575760_41776494|GENSCAN_predicted_CDS_5|738_bp
atggataaaaatgagctggttcagaaggccaaactggccgagcaggctgagcgatatgat
gacatggcagcctgcatgaagtctgtaactgagcaaggagctgaattatccaatgaggag
aggaatcttctctcagttgcttataaaaatgttttaggagcccgtaggtcatcttggagg
gtcgtctcaagtattgaacaaaagacggaaggtgctgagaaaaaacagcagatggctcga
gaatacagagagaaagttgatacggagctaagagatatctgcaatgatgtactgtttctt
ttggaaaagttcttgatccccagtgcttcacaagcagagagcaaagtcttctctttgaaa
atgaaaggagattactaccattacttggcagaggttgccactggtgatgacaagaaaggg
attgtggatcagtcacaacaagcataccaagaagcttttgaaatcagcaaaaaggaaatg
caaccaacacatcctatcagaccaggtctggcccttaacttctctgtgttctattatgag
attctgaactccccagagaaagcctgctctcttgcaaagacagcttttgatgaagccatt
gctgaacttgatacattaattgaagagtcatacaaagacagcatgctaataatgcaatta
ctgagagacaacttgacattgtggacatcagatacccaaggagacgaagctgaagcagga
gaaggaggggaaaattaa

>gi568815575r:41575760_41776494|GENSCAN_predicted_peptide_6|374_aa
MTTTSVSSWPYSSHRMRFITNHSDQPPQNFSATPNVTTCPMDEKLLSTVLTTSYSVIFIV
GLVGNIIALYVFLGIHRKRNSIQIYLLNVAIADLLLIFCLPFRIMYHINQNKWTLGVILC
KVVGTLFYMNMYISIILLGFISLDRYIKINRSIQQRKAITTKQSIYVCCIVWMLALGGFL
TMIILTLKKGGHNSTMCFHYRDKHNAKGEAIFNFILVVMFWLIFLLIILSYIKIGKNLLR
ISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQLNVSSCYWKEIVHK
TNEIMLVLSSFNSCLDPVMYFLMSSNIRKIMCQLLFRRFQGEPSRSESTSEFKPGYSLHD
TSVAVKIQSSSKST

>gi568815575r:41575760_41776494|GENSCAN_predicted_CDS_6|1125_bp
atgacgacaacttcagtcagcagctggccttactcctcccacagaatgcgctttataacc
aatcatagcgaccaaccgccacaaaacttctcagcaacaccaaatgttactacctgtccc
atggatgaaaaattgctatctactgtgttaaccacatcctactctgttattttcatcgtg
ggactggttgggaacataatcgccctctatgtatttctgggtattcaccgtaaaagaaat
tccattcaaatttatctacttaacgtagccattgcagacctcctactcatcttctgcctc
cctttccgaataatgtatcatattaaccaaaacaagtggacactaggtgtgattctgtgc
aaggttgtgggaacactgttttatatgaacatgtacattagcattattttgcttggattc
atcagtttggatcgctatataaaaattaatcggtctatacagcaacggaaggcaataaca
accaaacaaagtatttatgtctgttgtatagtatggatgcttgctcttggtggattccta
actatgattattttaacacttaagaaaggagggcataattccacaatgtgtttccattac
agagataagcataacgcaaaaggagaagccatttttaacttcattcttgtggtaatgttc
tggctaattttcttactaataatcctttcatatattaagattgggaagaatctattgagg
atttctaaaaggaggtcaaaatttcctaattctggtaaatatgccactacagctcgtaac
tcctttattgtacttatcatttttactatatgttttgttccctatcatgcctttcgattc
atctacatttcttcacagctaaatgtatcatcttgctactggaaagaaattgttcacaaa
accaatgagatcatgctggttctctcatctttcaatagttgcttagatccagtcatgtat
ttcctgatgtccagtaacattcgcaaaataatgtgccaacttctttttagacgatttcaa
ggtgaaccaagtaggagtgaaagcacttcagaatttaaaccaggatactccctgcatgat
acatctgtggcagtgaaaatacagtctagttctaaaagtacttga

>gi568815575r:41575760_41776494|GENSCAN_predicted_peptide_7|207_aa
MKDHMERGAQPAQLFQVMLQTPVLLLNKILPYPSSPFKLSAYPHSSWIRTGAWELLNAGL
TLELCEELRDSTETWTGPRKQLSTDQQRVAWCVNDSSKVNNLVWKDATLDQRSLEQQLCC
NRLLKKGYTRQQFCHKSTLNKGDRVIYKLTCPPYCCVRFPLAGTGPRILYLSRLASNLEL
LKKGKGRGEQKKEEVTCGMLRKVKTCK

>gi568815575r:41575760_41776494|GENSCAN_predicted_CDS_7|624_bp
atgaaagatcacatggagagaggggcacagcctgctcaactcttccaggtgatgctccag
acacctgttctgctgctcaataaaattcttccctacccatcctcacccttcaaattgtca
gcgtatcctcattcttcgtggataaggacaggagcttgggaactgctgaacgcaggactg
actctggaactgtgtgaggaactgcgggattctactgagacttggacagggccccgtaaa
cagctctcaactgaccaacaaagagttgcttggtgtgtaaatgacagttccaaggtgaac
aatcttgtttggaaggatgccactcttgatcaaagaagtttggagcagcagctgtgctgc
aatcggttactgaagaaagggtacactcgccagcagttttgccacaagagtacactgaac
aaaggagacagggtcatttataagctgacgtgtccaccctactgctgtgtccggtttcca
ttggctggaacgggacctcgcattctgtatctgtcccgattggctagcaacttagaactt
cttaaaaaaggcaaaggcagaggagaacaaaagaaggaggaagtaacttgtggaatgctg
agaaaagtaaaaacctgcaaataa

>gi568815575r:41575760_41776494|GENSCAN_predicted_peptide_8|137_aa
XLRLFPHPFWVPPESPLALRTSPKFFLETPESIEAFYFMDGADLCFEIVKRADAGFVYSE
AVASHYMRQILEALRYCHDNNIIHRDVKPLKSTVSLLQYSIGHTEPALHQCGTGKYQEVM
ITGSHLGNWLSQMSINR

>gi568815575r:41575760_41776494|GENSCAN_predicted_CDS_8|414_bp
nngctccgtcttttccctcatcccttctgggtccctccagaaagtcctctagctctcaga
acatctcccaaattctttttggaaacaccagagtccattgaggcattttattttatggat
ggagcagatctgtgttttgaaatcgtaaagcgagctgacgctggttttgtgtacagtgaa
gctgtagccagccattatatgagacagatactggaagctctacgctactgccatgataat
aacataattcacagggatgtgaagcctctgaagtcaacagtgtcacttctgcagtattct
attggtcacacagagccagccctgcatcagtgtgggacgggtaaatatcaggaggtgatg
atcactgggagccatcttggaaactggctatcacagatgtcaatcaaccgttga