GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:18:03

Sequence gi568815578f:50631787_50850485 : 218699 bp : 48.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    595    648   54  0  0   75   99    38 0.382   3.93
 1.02 Intr +   4958   5080  123  1  0   74   83    62 0.621   5.08
 1.03 Intr +  13885  14000  116  0  2   73   68    38 0.002  -0.45
 1.04 Intr +  28080  28214  135  0  0   83   19    90 0.171   1.28
 1.05 Intr +  30235  30363  129  1  0   79   37   111 0.061   4.91
 1.06 Intr +  41156  41322  167  2  2   47  115    35 0.048   1.70
 1.07 Intr +  50060  50188  129  0  0   75   69    34 0.014   0.87
 1.08 Intr +  60655  60744   90  2  0   95   53    36 0.003   0.77
 1.09 Intr +  71837  72041  205  0  1  102  105    -4 0.014   0.96
 1.10 Intr +  72970  73093  124  1  1   24   76   104 0.035   3.39
 1.11 Term +  82204  82278   75  0  0   85   50    40 0.380  -2.26
 1.12 PlyA +  83357  83362    6                               1.05

 2.00 Prom +  91424  91463   40                              -1.06
 2.01 Init +  99369  99420   52  2  1   44   58    94 0.669   1.33
 2.02 Intr +  99879 100066  188  1  2   82   91    97 0.701   8.81
 2.03 Intr + 106071 106293  223  2  1   60  110   131 0.996  10.20
 2.04 Term + 117873 118702  830  1  2   72   47   565 0.940  44.01
 2.05 PlyA + 119507 119512    6                               1.05

 3.00 Prom + 122832 122871   40                              -1.36
 3.01 Init + 163208 163387  180  1  0   71   75   220 0.427  16.47
 3.02 Intr + 186425 186496   72  1  0   96  105    82 0.008  10.30
 3.03 Intr + 198493 198594  102  0  0  113   94   127 0.062  16.17
 3.04 Intr + 209980 210114  135  0  0   96   92    89 0.143  10.86
 3.05 Intr + 213815 213907   93  1  0   98   22    81 0.053   2.66
 3.06 Term + 217041 217211  171  2  0  102   48    70 0.065   2.23
 3.07 PlyA + 218195 218200    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 189405 189232  174  0  0   35   97    91 0.941   4.84
S.002 Term + 198493 198621  129  0  0  113   54   177 0.856  14.98


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:50631787_50850485|GENSCAN_predicted_peptide_1|448_aa
MSEELAVSVQLAKTPALQVWLEEAESTPAKSVRSLLAKAALRLLPTASQREPAISPHLEI
LPVLHFLKHPEPRTAESTLWNAHNSPQASRPWDSRTATWRRHVTHMVWPLMTEQAMDTGP
RRDHSLTGHEHEFRYMPQKDEPGWFCNQQPLQTSLGGSKELTPDEEKDQPQTHSSSSHFQ
THGRRGAWRFGGKPSDAEYVGCPSWVATNPSIECAESWTGGCPHCPEAGPGEGSYLLCRG
QGEAVPQRCGTSQTRSPFKAFGHSSPVLDVSQDLGQIPPIQVAKTSVEKKPEINSTKEQE
RTPLPIKAHTQTLKGPDKEMPRPEGRLRLPEDPPSVRKSHRFQDKGQKSVFQGACCLNHY
KQRPSKQASWNPCMCQCCLSHQRNSPSTVHCSGVTVLAATPPSRNAPHLDLSAMVAVTCK
VFPPLLGEVTVSNLGKLRQLPQSQPERS

>gi568815578f:50631787_50850485|GENSCAN_predicted_CDS_1|1347_bp
atgtcggaagagctggctgtctctgtgcaattggctaagaccccagctctgcaggtgtgg
ctggaggaagcagagtctactcccgctaagtctgtccgctcactgctggccaaagctgcc
ctgcgtctcctccccaccgccagccagagggaacctgcaatttcacctcatttagagatc
cttcctgtcttgcatttcctcaagcatccggagcccaggactgctgagtcaaccctctgg
aatgcccacaactccccacaggccagccggccttgggactcccgcacagccacgtggagg
aggcacgtgacccacatggtctggccactgatgactgaacaagctatggacaccggaccc
cggagagaccattcactcactggccacgaacatgagttcagatacatgccccaaaaggat
gagcctggctggttctgcaatcagcagcccctccagacatccctgggaggctccaaggag
ctgactcctgatgaggaaaaggatcagccgcagactcactcctcctccagccacttccag
acccacgggaggcgtggcgcatggagatttgggggtaaacccagtgatgctgagtatgtg
ggctgcccaagctgggtggcaaccaaccccagcattgaatgtgctgagagctggaccggt
ggatgtccccactgccctgaggcaggtccaggagaaggctcctacctgctgtgcagaggg
caaggagaagctgtgccacaaagatgtgggacgtcacaaacacgcagcccattcaaggct
tttggacattccagccccgtccttgatgtcagtcaagatctagggcaaattccacccatt
caggtggcaaaaactagtgtggaaaagaaaccagaaataaacagcaccaaagaacaggaa
cggacacccctccccattaaagcacacacacagactctgaagggcccagacaaagagatg
ccaagaccagaggggaggctcaggctcccagaggatcctccatctgtaagaaagagccac
aggtttcaggacaaggggcagaagagcgtattccagggagcttgctgcctgaatcactac
aagcagcgtcccagtaaacaggcctcctggaacccgtgcatgtgccagtgctgcctctct
catcaaaggaattcaccaagcactgttcactgctctggagtaacagtcctggcagcaact
ccacccagccgcaatgccccacacctggatctttctgcaatggtcgctgtcacctgcaaa
gtgtttccacctttgcttggtgaggttactgtgtccaacctgggcaaactgaggcagctg
ccccaatcacagccagagcggagctga

>gi568815578f:50631787_50850485|GENSCAN_predicted_peptide_2|430_aa
MRLLALRPEAGRRAMASGACEEAPGPQPLSEIPSRALAPRAPEGPPGRRRPSRGSAFSMN
RSHRHGAGSGCLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGY
ADIHGDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYSAFGTDTLIKKKNVLTNVLRP
DNHRKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGSSVRVT
PHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNL
IITVRPANQRNNVVRNSRTSGSSGQSTDNSLLGYPQQIEPSFEPEDEDSEEDDIIIEDNG
VPQQIPKAVPNTESLESLTQIELSFESGQNGFIPSNEVSLAAIASSSNTEFETHAPDQKL
LEEDGTIITL

>gi568815578f:50631787_50850485|GENSCAN_predicted_CDS_2|1293_bp
atgcgccttctggctctccggcctgaagcggggcggagggccatggcttcaggtgcctgt
gaggaggcgcccgggccgcaaccgctttccgagatccccagtcgcgcactcgctccccgc
gctcctgaggggccgcccggccggaggaggccgtcgcggggctcggcgttcagcatgaac
cgcagccaccggcacggggcgggcagcggctgcctgggcactatggaggtgaagagcaag
tttggagctgaatttcgtcggttttcgctggaaagatcaaaacctggaaaatttgaggag
ttttatggattactacaacatgttcataagatccccaatgttgacgttttggtaggctat
gcagacatccatggagacttactacctataaataatgatgataattatcacaaagctgtt
tcaacggccaatccactgcttaggatatttatacaaaagaaggaagaagcagactacagt
gcctttggtacagacacgctaataaagaagaagaatgttttaaccaacgtattgcgtcct
gacaaccatagaaaaaagccacatatagtcattagtatgccccaagactttagacctgtg
tcttctattatagacgtggatattctcccagaaacgcatcgtagggtacgtctttacaaa
tacggcacggagaaacccctaggattctacatccgggatggctccagtgtcagggtaaca
ccacatggcttagaaaaggttccagggatctttatatccaggcttgtcccaggaggtctg
gctcaaagtacaggactattagctgttaatgatgaagttttagaagttaatggcatagaa
gtttcagggaagagccttgatcaagtaacagacatgatgattgcaaatagccgtaacctc
atcataacagtgagaccggcaaaccagaggaataatgttgtgaggaacagtcggacttct
ggcagttccggtcagtctactgataacagccttcttggctacccacagcagattgaacca
agctttgagccagaggatgaagacagcgaagaagatgacattatcattgaagacaatgga
gtgccacagcagattccaaaagctgttcctaatactgagagcctggagtcattaacacag
atagagctaagctttgagtctggacagaatggctttattccctctaatgaagtgagctta
gcagccatagcaagcagctcaaacacggaatttgaaacacatgctccagatcaaaaactc
ttagaagaagatggaacaatcataacattatga

>gi568815578f:50631787_50850485|GENSCAN_predicted_peptide_3|250_aa
MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAE
AKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPVLKAKLTEMRGIYAKVDRLEAF
VKMVGHHVAFLEADVLQAERDHGAFPQALRRWLGSAGLPSFRNDPTAPLRQVFEASPDPR
LARTVTIQTQQPVRVSGPLSGQRKEKSLQKGAQVFQTNVPETLLEGAAISPAPACGGPLT
SGDGFRHVRK

>gi568815578f:50631787_50850485|GENSCAN_predicted_CDS_3|753_bp
atgcagcggaccgggggcggggctccgaggcccgggcgcaaccacgggctcccaggcagc
ctccgccagccggaccccgtcgccctcctgatgctgctcgtggacgctgatcagccggag
cccatgcgcagcggggcgcgcgagctcgcgctcttcctgacccccgagcctggggccgag
gcgaaggaggtggaggagaccatcgagggcatgctcctcaggctggaagagttttgcagc
ctggctgacctgatcaggagtgatacttcacagatcctggaggaaaacatcccagtcctt
aaggccaaactgacagaaatgcgtggcatctatgccaaagtggaccggctagaggccttc
gtcaagatggttggacaccacgtcgccttcctggaagcagacgtgcttcaggctgagcgg
gaccatggggccttccctcaggccctgcggaggtggctgggatccgcagggctcccctcc
ttcaggaacgaccccactgcccccctgaggcaggtgtttgaggcctcccccgaccccagg
ctggcccgaacagtgaccatccagacgcagcagccagtcagggtctcagggcccttgtcc
ggtcagaggaaagaaaagagtctccagaaaggggcccaggtcttccagacaaatgtccct
gagaccctgctagagggggcagccatcagcccagcgcctgcttgcggagggcccctcaca
tctggagatggtttcaggcatgtgcggaagtga