GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:11:38

Sequence gi568815597r:206668639_206872435 : 203797 bp : 45.40% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  16592  16870  279  1  0  101   56   586 0.688  51.71
 1.02 Intr +  25275  25422  148  2  1   82   70    50 0.063   2.41
 1.03 Intr +  37661  37789  129  0  0   96   43    42 0.001   1.17
 1.04 Intr +  37928  37976   49  0  1   96   74    23 0.000  -0.56
 1.05 Intr +  58415  58511   97  2  1  113   65    49 0.220   5.11
 1.06 Intr +  60072  60211  140  2  2   52  103   247 0.410  21.86
 1.07 Intr +  60397  60461   65  1  2   44   60    56 0.943  -3.24
 1.08 Intr +  60758  60837   80  0  2  119   45   110 0.695   9.07
 1.09 Intr +  61334  61460  127  1  1   91  106   135 0.999  15.85
 1.10 Intr +  62050  62125   76  2  1   79   76    92 0.988   5.67
 1.11 Intr +  62500  62624  125  1  2   85  116   170 0.998  19.73
 1.12 Intr +  63002  63087   86  0  2  108  103   114 0.999  14.44
 1.13 Intr +  63201  63281   81  2  0  100  100    50 0.991   7.23
 1.14 Term +  63937  64080  144  0  0  101   52   227 0.998  18.31
 1.15 PlyA +  69259  69264    6                               1.05

 2.05 PlyA -  71721  71716    6                               1.05
 2.04 Term -  72727  72657   71  2  2  103   46    76 0.806   3.00
 2.03 Intr -  86173  86017  157  1  1   43  100    56 0.165   1.88
 2.02 Intr -  87831  87766   66  0  0   35  115    47 0.197   1.20
 2.01 Init -  90412  90356   57  1  0   50  101    51 0.237   3.91
 2.00 Prom -  97371  97332   40                              -3.86

 3.06 PlyA -  98987  98982    6                               1.05
 3.05 Term - 100090  99998   93  1  0   78   53   172 0.999  10.53
 3.04 Intr - 101256 101191   66  0  0  113  105    72 0.991  10.50
 3.03 Intr - 102421 102269  153  1  0   98   75   169 0.999  16.87
 3.02 Intr - 102777 102718   60  0  0  105  100    72 0.998   9.03
 3.01 Init - 103797 103633  165  0  0   69   59   165 0.982   9.33
 3.00 Prom - 103891 103852   40                              -2.96

 4.00 Prom + 104266 104305   40                             -10.35
 4.01 Init + 105340 105450  111  0  0   98   38    58 0.860   2.01
 4.02 Intr + 108873 109040  168  2  0   55  100    82 0.898   6.24
 4.03 Intr + 116337 116582  246  2  0   56   74   149 0.174   7.96
 4.04 Intr + 128471 128609  139  1  1   66   34    50 0.032  -2.56
 4.05 Intr + 130223 130368  146  0  2  125   98     0 0.091   4.70
 4.06 Intr + 140790 140870   81  2  0  130   58     6 0.032   1.63
 4.07 Intr + 168320 168385   66  1  0  103   67    54 0.912   3.90
 4.08 Intr + 171212 171364  153  1  0   66   56   205 0.848  15.37
 4.09 Intr + 172366 172440   75  0  0   37  110    34 0.326   0.21
 4.10 Intr + 175189 175298  110  0  2  122   75     2 0.484   1.38
 4.11 Intr + 178630 178695   66  1  0   58   96    43 0.031   0.12
 4.12 Intr + 185925 186031  107  0  2   68   80    26 0.029  -0.34
 4.13 Intr + 196909 197048  140  2  2   60   83    53 0.505   2.18
 4.14 Intr + 197185 197373  189  0  0   73   76    58 0.599   2.88
 4.15 Intr + 197661 197726   66  2  0   77   95    21 0.633   0.80
 4.16 Intr + 197846 197998  153  1  0  107   56    94 0.848   8.37
 4.17 Term + 199849 199926   78  0  0   95   49    35 0.461  -1.94
 4.18 PlyA + 200563 200568    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  38495  38317  179  2  2   41   94   135 0.932   8.13
S.002 Init + 153576 153718  143  2  2   86   68   107 0.805   8.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:206668639_206872435|GENSCAN_predicted_peptide_1|541_aa
MLSNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAII
DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKLSHMQNVTECMGFFYLLTAVLMCVHGG
VASSSTPQGSWRLVEQDEERGSATETQSHSDGGGAKPVPLIIASLLVEKGQMLLCSYPDH
PAGRLGSKPLPRTSELTEAGMGMSLGHPSPLNVQSSWSVDCVGLILTSHEDAKSMLQDCP
KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT
EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS
LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI
RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS
RVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPLLLKRRKKARALEAAALA
H

>gi568815597r:206668639_206872435|GENSCAN_predicted_CDS_1|1626_bp
atgctgtccaactcccagggccagagcccgccggtgccgttccccgccccggccccgccg
ccgcagccccccacccctgccctgccgcaccccccggcgcagccgccgccgccgcccccg
cagcagttcccgcagttccacgtcaagtccggcctgcagatcaagaagaacgccatcatc
gatgactacaaggtcaccagccaggtcctggggctgggcatcaacggcaaagttttgcag
atcttcaacaagaggacccaggagaaattcgccctcaaactcagccacatgcagaatgtc
accgagtgcatgggtttcttctacctcttgactgcagtattgatgtgtgtccatggaggt
gtggcctcttcctctactccccagggatcctggagacttgtggagcaagatgaggaaagg
ggctcagccacagagacccagagtcactcagatgggggaggagcaaagccagtccctctg
atcattgcctctttgttagtggagaaagggcagatgctgctctgcagttatcccgaccac
cctgcaggacgtctggggagcaagcccttgccaagaacctctgagctcaccgaggcgggt
atgggcatgtctcttggacaccccagccctctgaatgtccaaagcagttggagtgtggac
tgtgtagggctcatcttgacttcccatgaagatgctaaatctatgcttcaggactgcccc
aaggcccgcagggaggtggagctgcactggcgggcctcccagtgcccgcacatcgtacgg
atcgtggatgtgtacgagaatctgtacgcagggaggaagtgcctgctgattgtcatggaa
tgtttggacggtggagaactctttagccgaatccaggatcgaggagaccaggcattcaca
gaaagagaagcatccgaaatcatgaagagcatcggtgaggccatccagtatctgcattca
atcaacattgcccatcgggatgtcaagcctgagaatctcttatacacctccaaaaggccc
aacgccatcctgaaactcactgactttggctttgccaaggaaaccaccagccacaactct
ttgaccactccttgttatacaccgtactatgtggctccagaagtgctgggtccagagaag
tatgacaagtcctgtgacatgtggtccctgggtgtcatcatgtacatcctgctgtgtggg
tatccccccttctactccaaccacggccttgccatctctccgggcatgaagactcgcatc
cgaatgggccagtatgaatttcccaacccagaatggtcagaagtatcagaggaagtgaag
atgctcattcggaatctgctgaaaacagagcccacccagagaatgaccatcaccgagttt
atgaaccacccttggatcatgcaatcaacaaaggtccctcaaaccccactgcacaccagc
cgggtcctgaaggaggacaaggagcggtgggaggatgtcaaggaggagatgaccagtgcc
ttggccacaatgcgcgttgactacgagcagatcaagataaaaaagattgaagatgcatcc
aaccctctgctgctgaagaggcggaagaaagctcgggccctggaggctgcggctctggcc
cactga

>gi568815597r:206668639_206872435|GENSCAN_predicted_peptide_2|116_aa
MDIKIESGDHYVGVIDTKMPVNVKEKFLKEIKSDTPLNTQMAKCYQTASHATEKSVVKES
INPANFTAVYFKKLLQPPQPSATTTLISSHQHQGICMPVREAGSPVKIKHQEAKQG

>gi568815597r:206668639_206872435|GENSCAN_predicted_CDS_2|351_bp
atggacatcaagattgagtctggagatcactatgtgggggtcattgatacaaagatgcca
gtaaatgtgaaggaaaagtttctgaaggaaattaaaagtgatactccactgaatacacag
atggcaaaatgctatcaaacagcgtcacatgctacagagaaatctgttgtgaaagagtca
atcaatccagcaaacttcactgctgtctattttaagaaattgctacaaccacctcagcct
tcagcaaccaccaccttaatcagcagccatcaacatcaaggcatttgcatgccagtcaga
gaagcaggtagcccggtcaagatcaaacaccaggaggccaaacaaggctga

>gi568815597r:206668639_206872435|GENSCAN_predicted_peptide_3|178_aa
MHSSALLCCLVLLTGVRASPGQGTQSENSCTHFPGNLPNMLRDLRDAFSRVKTFFQMKDQ
LDNLLLKESLLEDFKGYLGCQALSEMIQFYLEEVMPQAENQDPDIKAHVNSLGENLKTLR
LRLRRCHRFLPCENKSKAVEQVKNAFNKLQEKGIYKAMSEFDIFINYIEAYMTMKIRN

>gi568815597r:206668639_206872435|GENSCAN_predicted_CDS_3|537_bp
atgcacagctcagcactgctctgttgcctggtcctcctgactggggtgagggccagccca
ggccagggcacccagtctgagaacagctgcacccacttcccaggcaacctgcctaacatg
cttcgagatctccgagatgccttcagcagagtgaagactttctttcaaatgaaggatcag
ctggacaacttgttgttaaaggagtccttgctggaggactttaagggttacctgggttgc
caagccttgtctgagatgatccagttttacctggaggaggtgatgccccaagctgagaac
caagacccagacatcaaggcgcatgtgaactccctgggggagaacctgaagaccctcagg
ctgaggctacggcgctgtcatcgatttcttccctgtgaaaacaagagcaaggccgtggag
caggtgaagaatgcctttaataagctccaagagaaaggcatctacaaagccatgagtgag
tttgacatcttcatcaactacatagaagcctacatgacaatgaagatacgaaactga

>gi568815597r:206668639_206872435|GENSCAN_predicted_peptide_4|697_aa
MDPDGGHFQCSASSSPFCISNGTTPVAAGSELAALEKLKPKSGEQASSLVRVALELQREG
SGIRACWTLGLDSLLGNTVSRQRAGRLTMQAEKSTVRPVWVLVQSQELPAATGFEVLKSP
NASIVSHGKRRAGREEWPVLETGYLTPVKTTVDEYSGHAGSGSADSWILEGGSMQCRDFA
AGQDVNILGFCMVKLSHLSGVIVTQSLPNLFISPGPHGILPKRCLHTLTGVQECALRERF
RTDLRVPYHSHMCTHISMCVCQCFGALFHGVFTLAQLQGKTLLANWVEYFSAQPTVLQAK
DTFPNVTILSTLETLQIIKPLDVCCVTKNLLAFYVDRVFKDHQEPNPKILRKISSIANSF
LYMQKTLRQCQEQRQCHCRQEATNATRVIHDNYDQAHCDPAIVVCSVFRKHTRHVLTIQC
MHFVYMHTHKLRTWLLDGISEPALGNSGAHSHEGSASPDGSLPCPGNGSCSFCMANQAPG
SLPGSPCYSGLTCWALTAEPGWGQNKGATTCATNSHSDSELRPEIFSSREAWQFFLLLWS
PDFRPKMKASSLAFSLLSAAFYLLWTPSTGLKTLNLGSCVIATNLQEIRNGFSEIRGSVQ
AKDGNIDIRILRRTESLQDTKPANRCCLLRHLLRLYLDRVFKNYQTPDHYTLRKISSLAN
SFLTIKKDLRLCLEPQAAVVKALGELDILLQWMEETE

>gi568815597r:206668639_206872435|GENSCAN_predicted_CDS_4|2094_bp
atggacccagatggagggcatttccagtgttctgctagttcttcacctttctgcatcagc
aatgggacaactccagtggcagcaggttctgagcttgctgcactagagaagctcaaaccc
aagagtggggagcaggctagcagccttgtgagggtggctctggagctgcagagggaaggt
tcagggatccgggcttgctggactctgggtttagacagcttgttgggcaacacggtcagc
cggcagagagcaggcaggttgacgatgcaggcagagaagagcacagtgaggccagtctgg
gtgctggttcagtcccaggagttgccagctgctacgggctttgaagtattaaagtccccc
aatgcctccattgtatcccatgggaaaaggcgagcaggcagggaggaatggccagtgcta
gaaacaggatatctgacccctgtgaaaaccactgtggatgaatactcgggtcatgcaggc
tctggatcagcagattcttggatccttgaaggagggtccatgcagtgtagagactttgct
gcgggacaggatgtgaacatccttggcttttgcatggtcaagttaagtcacttgtccggg
gtcatagtgacacaatcattgccaaacctgttcatttcaccagggccccatgggattttg
ccaaagcggtgcttgcacacactgacaggagtccaagaatgtgcactgagggagcgtttc
cgcacagatctgcgtgttccttaccactcacacatgtgcacacacatatccatgtgtgtg
tgccagtgctttggggctctgttccacggggtcttcactttagctcagcttcaagggaag
actctgttggccaactgggtagaatatttctctgcccagcccacagttctgcaagctaag
gacaccttcccaaatgtcactatcctgtccacattggagactctgcagatcattaagccc
ttagatgtgtgctgcgtgaccaagaacctcctggcgttctacgtggacagggtgttcaag
gatcatcaggagccaaaccccaaaatcttgagaaaaatcagcagcattgccaactctttc
ctctacatgcagaaaactctgcggcaatgtcaggaacagaggcagtgtcactgcaggcag
gaagccaccaatgccaccagagtcatccatgacaactatgatcaggctcactgtgaccca
gccatagttgtttgctctgtgtttcgcaaacacaccaggcatgttctcaccatacagtgt
atgcactttgtgtacatgcacactcataaactgaggacttggctcttggatggcatttct
gaacctgccctggggaacagtggagcccacagccatgaagggtctgcatctccagatggc
tctctgccatgtcctggcaatggctcttgtagtttctgcatggccaaccaggctccaggt
agccttcctggttctccctgctactcaggccttacctgctgggcactaacggcggagcca
ggatggggacagaataaaggagccacgacctgtgccaccaactcgcactcagactctgaa
ctcagacctgaaatcttctcttcacgggaggcttggcagtttttcttactcctgtggtct
ccagatttcaggcctaagatgaaagcctctagtcttgccttcagccttctctctgctgcg
ttttatctcctatggactccttccactggactgaagacactcaatttgggaagctgtgtg
atcgccacaaaccttcaggaaatacgaaatggattttctgagatacggggcagtgtgcaa
gccaaagatggaaacattgacatcagaatcttaaggaggactgagtctttgcaagacaca
aagcctgcgaatcgatgctgcctcctgcgccatttgctaagactctatctggacagggta
tttaaaaactaccagacccctgaccattatactctccggaagatcagcagcctcgccaat
tcctttcttaccatcaagaaggacctccggctctgtctggaacctcaggcagcagttgtg
aaggctttgggggaactagacattcttctgcaatggatggaggagacagaatag