Result of FASTA (ccds) for
pF1KE1080
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1080, 1258 aa
1>>>pF1KE1080 1258 - 1258 aa - 1258 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.1960+/-0.00114; mu= 9.9166+/- 0.069
mean_var=184.9853+/-35.658, 0's: 0 Z-trim(109.1): 45 B-trim: 3 in 1/50
Lambda= 0.094299
statistics sampled from 10654 (10670) to 10654 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.659), E-opt: 0.2 (0.328), width: 16
Scan time: 5.500
The best scores are: opt bits E(32554)
CCDS55323.1 ZCCHC6 gene_id:79670|Hs108|chr9 (1259) 8447 1162.9 0
CCDS35057.1 ZCCHC6 gene_id:79670|Hs108|chr9 (1495) 3101 435.7 4.4e-121
CCDS83383.1 ZCCHC6 gene_id:79670|Hs108|chr9 ( 784) 2871 404.2 7e-112
CCDS30716.1 ZCCHC11 gene_id:23318|Hs108|chr1 (1644) 1508 219.0 8.2e-56
CCDS30715.1 ZCCHC11 gene_id:23318|Hs108|chr1 (1645) 1496 217.3 2.5e-55
CCDS75266.1 PAPD4 gene_id:167153|Hs108|chr5 ( 480) 408 68.9 3.5e-11
CCDS4048.1 PAPD4 gene_id:167153|Hs108|chr5 ( 484) 408 68.9 3.5e-11
>>CCDS55323.1 ZCCHC6 gene_id:79670|Hs108|chr9 (1259 aa)
initn: 5514 init1: 5445 opt: 8447 Z-score: 6219.0 bits: 1162.9 E(32554): 0
Smith-Waterman score: 8447; 99.4% identity (99.8% similar) in 1259 aa overlap (1-1258:1-1259)
10 20 30 40 50 60
pF1KE1 MGDTAKPYFVKRTKDRGTMDDDDFRRGHPQQDYLIIDDHAKGHGGKMEKGLQKKKITPGN
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
CCDS55 MGDTAKPYFVKRTKDRGTMDDDDFRRGHPQQDYLIIDDHAKGHGSKMEKGLQKKKITPGN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 YGNTPRKGPCAVSSNPYAFKNPIYSQPAWMNDSHKDQSKRWLSDEHTGNSDNWREFKPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YGNTPRKGPCAVSSNPYAFKNPIYSQPAWMNDSHKDQSKRWLSDEHTGNSDNWREFKPGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RIPVINRQRKDSFQENEDGYRWQDTRGCRTVRRLFHKDLTSLETTSEMEAGSPENKKQRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RIPVINRQRKDSFQENEDGYRWQDTRGCRTVRRLFHKDLTSLETTSEMEAGSPENKKQRS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 RPRKPRKTRNEENEQDGDLEGPVIDESALSTKELLGLQQAEERLKRDCIDRLKRRPRNYP
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS55 RPRKPRKTRNEENEQDGDLEGPVIDESVLSTKELLGLQQAEERLKRDCIDRLKRRPRNYP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 TAKYTCRLCDVLIESIAFAHKHIKEKRHKKNIKEKQEEELLTTLPPPTPSQINAVGIAID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TAKYTCRLCDVLIESIAFAHKHIKEKRHKKNIKEKQEEELLTTLPPPTPSQINAVGIAID
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 KVVQEFGLHNESLEQRLEIKRIMENVFQHKLPDCSLRLYGSSCSRLGFKNSDVNIDIQFP
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KVVQEFGLHNENLEQRLEIKRIMENVFQHKLPDCSLRLYGSSCSRLGFKNSDVNIDIQFP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 AIIEGFSLSKLGNFNLQDIEKDVVIWEHTDSAAGDTGITKEEAPRETPIKRGQVSLILDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AIIEGFSLSKLGNFNLQDIEKDVVIWEHTDSAAGDTGITKEEAPRETPIKRGQVSLILDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 KHQPSVPVGQLWVELLRFYALEFNLADLVISIRVKELVSRELKDWPKKRIAIEDPYSVKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KHQPSVPVGQLWVELLRFYALEFNLADLVISIRVKELVSRELKDWPKKRIAIEDPYSVKR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 NVARTLNSQPVFEYILHCLRTTYKYFALPHKITKSSLLKPLNAITCISEHSKEVINHHPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NVARTLNSQPVFEYILHCLRTTYKYFALPHKITKSSLLKPLNAITCISEHSKEVINHHPD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE1 VQTKDDKLKNSVLAQGPGATSSAANTCKVQPLTLKETAESFGSPPKEEMGNEHISVHPEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VQTKDDKLKNSVLAQGPGATSSAANTCKVQPLTLKETAESFGSPPKEEMGNEHISVHPEN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE1 SDCIQADVNSDDYKGDKVYHPETGRKNEKEKVGRKGKHLLTVDQKRGEHVVCGSTRNNES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SDCIQADVNSDDYKGDKVYHPETGRKNEKEKVGRKGKHLLTVDQKRGEHVVCGSTRNNES
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE1 ESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTEELEDSLNHFTHSVQGQTSEMIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTEELEDSLNHFTHSVQGQTSEMIP
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE1 SDEEEEDDEEEEEEEEPRLTINQREDEDGMANEDELDNTYTGSGDEDALSEEDDELGEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SDEEEEDDEEEEEEEEPRLTINQREDEDGMANEDELDNTYTGSGDEDALSEEDDELGEAA
730 740 750 760 770 780
790 800 810 820 830
pF1KE1 KYEDVKECGKHVERALLVELNKISLKEENVCEE-NSPVDQSDFFYEFSKLIFTKGKGLDC
::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::
CCDS55 KYEDVKECGKHVERALLVELNKISLKEENVCEEKNSPVDQSDFFYEFSKLIFTKGKGLDC
790 800 810 820 830 840
840 850 860 870 880 890
pF1KE1 VRTIEELARVLRKHSGLRNILPITTAKMPIVKFFHLRSGLEVDISLYNTLALHNTRLLSA
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS55 VRTIEELARVLRKHSGLRNILPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSA
850 860 870 880 890 900
900 910 920 930 940 950
pF1KE1 YSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIY
910 920 930 940 950 960
960 970 980 990 1000 1010
pF1KE1 KGEEKPEIFVDGWNIYFFDQIDELPTYWSECGKNTESVGQLWLGLLRFYTEEFDFKEHVI
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KGEKKPEIFVDGWNIYFFDQIDELPTYWSECGKNTESVGQLWLGLLRFYTEEFDFKEHVI
970 980 990 1000 1010 1020
1020 1030 1040 1050 1060 1070
pF1KE1 SIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVK
1030 1040 1050 1060 1070 1080
1080 1090 1100 1110 1120 1130
pF1KE1 GFSKDYPSKMEYFFDPDVLTEGELAPNDRCCRICGKIGHFMKDCPMRRKVRRRRDQEDAL
:: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GFPKDYPSKMEYFFDPDVLTEGELAPNDRCCRICGKIGHFMKDCPMRRKVRRRRDQEDAL
1090 1100 1110 1120 1130 1140
1140 1150 1160 1170 1180 1190
pF1KE1 NQRYPENKEKRSKEDKEIHNKYTEREVSTKEDKPIQCTPQKAKPMRAAADLGREKILRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NQRYPENKEKRSKEDKEIHNKYTEREVSTKEDKPIQCTPQKAKPMRAAADLGREKILRPP
1150 1160 1170 1180 1190 1200
1200 1210 1220 1230 1240 1250
pF1KE1 VEKWKRQDDKDLREKRCFICGREGHIKKECPQFKGSSGSLSSKYMTQGKASAKRTQQES
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VEKWKRQDDKDLREKRCFICGREGHIKKECPQFKGSSGSLSSKYMTQGKASAKRTQQES
1210 1220 1230 1240 1250
>>CCDS35057.1 ZCCHC6 gene_id:79670|Hs108|chr9 (1495 aa)
initn: 8290 init1: 2966 opt: 3101 Z-score: 2287.3 bits: 435.7 E(32554): 4.4e-121
Smith-Waterman score: 6742; 81.7% identity (82.0% similar) in 1322 aa overlap (92-1176:92-1413)
70 80 90 100 110 120
pF1KE1 GNTPRKGPCAVSSNPYAFKNPIYSQPAWMNDSHKDQSKRWLSDEHTGNSDNWREFKPGPR
::::::::::::::::::::::::::::::
CCDS35 GNTPRKGPCAVSSNPYAFKNPIYSQPAWMNDSHKDQSKRWLSDEHTGNSDNWREFKPGPR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IPVINRQRKDSFQENEDGYRWQDTRGCRTVRRLFHKDLTSLETTSEMEAGSPENKKQRSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 IPVINRQRKDSFQENEDGYRWQDTRGCRTVRRLFHKDLTSLETTSEMEAGSPENKKQRSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 PRKPRKTRNEENEQDGDLEGPVIDESALSTKELLGLQQAEERLKRDCIDRLKRRPRNYPT
::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
CCDS35 PRKPRKTRNEENEQDGDLEGPVIDESVLSTKELLGLQQAEERLKRDCIDRLKRRPRNYPT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 AKYTCRLCDVLIESIAFAHKHIKEKRHKKNIKEKQEEELLTTLPPPTPSQINAVGIAIDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AKYTCRLCDVLIESIAFAHKHIKEKRHKKNIKEKQEEELLTTLPPPTPSQINAVGIAIDK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 VVQEFGLHNESLEQRLEIKRIMENVFQHKLPDCSLRLYGSSCSRLGFKNSDVNIDIQFPA
::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 VVQEFGLHNENLEQRLEIKRIMENVFQHKLPDCSLRLYGSSCSRLGFKNSDVNIDIQFPA
310 320 330 340 350 360
pF1KE1 I-----------------------------------------------------------
:
CCDS35 IMSQPDVLLLVQECLKNSDSFIDVDADFHARVPVVVCREKQSGLLCKVSAGNENACLTTK
370 380 390 400 410 420
pF1KE1 ------------------------------------------------------------
CCDS35 HLTALGKLEPKLVPLVIAFRYWAKLCSIDRPEEGGLPPYVFALMAIFFLQQRKEPLLPVY
430 440 450 460 470 480
370 380 390 400 410
pF1KE1 ----IEGFSLSKLGNFNLQDIEKDVVIWEHTDSAAGDTGITKEEAPRETPIKRGQVSLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LGSWIEGFSLSKLGNFNLQDIEKDVVIWEHTDSAAGDTGITKEEAPRETPIKRGQVSLIL
490 500 510 520 530 540
420 430 440 450 460 470
pF1KE1 DVKHQPSVPVGQLWVELLRFYALEFNLADLVISIRVKELVSRELKDWPKKRIAIEDPYSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DVKHQPSVPVGQLWVELLRFYALEFNLADLVISIRVKELVSRELKDWPKKRIAIEDPYSV
550 560 570 580 590 600
480 490 500 510 520 530
pF1KE1 KRNVARTLNSQPVFEYILHCLRTTYKYFALPHKITKSSLLKPLNAITCISEHSKEVINHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 KRNVARTLNSQPVFEYILHCLRTTYKYFALPHKITKSSLLKPLNAITCISEHSKEVINHH
610 620 630 640 650 660
540 550 560 570 580 590
pF1KE1 PDVQTKDDKLKNSVLAQGPGATSSAANTCKVQPLTLKETAESFGSPPKEEMGNEHISVHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 PDVQTKDDKLKNSVLAQGPGATSSAANTCKVQPLTLKETAESFGSPPKEEMGNEHISVHP
670 680 690 700 710 720
600 610 620 630 640 650
pF1KE1 ENSDCIQADVNSDDYKGDKVYHPETGRKNEKEKVGRKGKHLLTVDQKRGEHVVCGSTRNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 ENSDCIQADVNSDDYKGDKVYHPETGRKNEKEKVGRKGKHLLTVDQKRGEHVVCGSTRNN
730 740 750 760 770 780
660 670 680 690 700 710
pF1KE1 ESESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTEELEDSLNHFTHSVQGQTSEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 ESESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTEELEDSLNHFTHSVQGQTSEM
790 800 810 820 830 840
720 730 740 750 760 770
pF1KE1 IPSDEEEEDDEEEEEEEEPRLTINQREDEDGMANEDELDNTYTGSGDEDALSEEDDELGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 IPSDEEEEDDEEEEEEEEPRLTINQREDEDGMANEDELDNTYTGSGDEDALSEEDDELGE
850 860 870 880 890 900
780 790 800 810 820 830
pF1KE1 AAKYEDVKECGKHVERALLVELNKISLKEENVCEE-NSPVDQSDFFYEFSKLIFTKGK--
::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS35 AAKYEDVKECGKHVERALLVELNKISLKEENVCEEKNSPVDQSDFFYEFSKLIFTKGKSP
910 920 930 940 950 960
pF1KE1 ------------------------------------------------------------
CCDS35 TVVCSLCKREGHLKKDCPEDFKRIQLEPLPPLTPKFLNILDQVCIQCYKDFSPTIIEDQA
970 980 990 1000 1010 1020
840
pF1KE1 ---------------------------------------------------GLDCVRTIE
:::::::::
CCDS35 REHIRQNLESFIRQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEGLDCVRTIE
1030 1040 1050 1060 1070 1080
850 860 870 880 890 900
pF1KE1 ELARVLRKHSGLRNILPITTAKMPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAID
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
CCDS35 ELARVLRKHSGLRNILPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAID
1090 1100 1110 1120 1130 1140
910 920 930 940 950 960
pF1KE1 PRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
CCDS35 PRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEKK
1150 1160 1170 1180 1190 1200
970 980 990 1000 1010 1020
pF1KE1 PEIFVDGWNIYFFDQIDELPTYWSECGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 PEIFVDGWNIYFFDQIDELPTYWSECGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRK
1210 1220 1230 1240 1250 1260
1030 1040 1050 1060 1070 1080
pF1KE1 SLLTTFKKQWTSKYIVIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVKGFSKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
CCDS35 SLLTTFKKQWTSKYIVIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVKGFPKD
1270 1280 1290 1300 1310 1320
1090 1100 1110 1120 1130 1140
pF1KE1 YPSKMEYFFDPDVLTEGELAPNDRCCRICGKIGHFMKDCPMRRKVRRRRDQEDALNQRYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 YPSKMEYFFDPDVLTEGELAPNDRCCRICGKIGHFMKDCPMRRKVRRRRDQEDALNQRYP
1330 1340 1350 1360 1370 1380
1150 1160 1170 1180 1190 1200
pF1KE1 ENKEKRSKEDKEIHNKYTEREVSTKEDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWK
::::::::::::::::::::::::::::::::
CCDS35 ENKEKRSKEDKEIHNKYTEREVSTKEDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWK
1390 1400 1410 1420 1430 1440
1210 1220 1230 1240 1250
pF1KE1 RQDDKDLREKRCFICGREGHIKKECPQFKGSSGSLSSKYMTQGKASAKRTQQES
CCDS35 RQDDKDLREKRCFICGREGHIKKECPQFKGSSGSLSSKYMTQGKASAKRTQQES
1450 1460 1470 1480 1490
>--
initn: 649 init1: 649 opt: 649 Z-score: 484.5 bits: 102.1 E(32554): 1.1e-20
Smith-Waterman score: 649; 98.9% identity (100.0% similar) in 91 aa overlap (1-91:1-91)
10 20 30 40 50 60
pF1KE1 MGDTAKPYFVKRTKDRGTMDDDDFRRGHPQQDYLIIDDHAKGHGGKMEKGLQKKKITPGN
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
CCDS35 MGDTAKPYFVKRTKDRGTMDDDDFRRGHPQQDYLIIDDHAKGHGSKMEKGLQKKKITPGN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 YGNTPRKGPCAVSSNPYAFKNPIYSQPAWMNDSHKDQSKRWLSDEHTGNSDNWREFKPGP
:::::::::::::::::::::::::::::::
CCDS35 YGNTPRKGPCAVSSNPYAFKNPIYSQPAWMNDSHKDQSKRWLSDEHTGNSDNWREFKPGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RIPVINRQRKDSFQENEDGYRWQDTRGCRTVRRLFHKDLTSLETTSEMEAGSPENKKQRS
CCDS35 RIPVINRQRKDSFQENEDGYRWQDTRGCRTVRRLFHKDLTSLETTSEMEAGSPENKKQRS
130 140 150 160 170 180
>--
initn: 564 init1: 564 opt: 564 Z-score: 422.0 bits: 90.5 E(32554): 3.5e-17
Smith-Waterman score: 564; 100.0% identity (100.0% similar) in 82 aa overlap (1177-1258:1414-1495)
1150 1160 1170 1180 1190 1200
pF1KE1 KEKRSKEDKEIHNKYTEREVSTKEDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQ
::::::::::::::::::::::::::::::
CCDS35 KEKRSKEDKEIHNKYTEREVSTKEDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQ
1390 1400 1410 1420 1430 1440
1210 1220 1230 1240 1250
pF1KE1 DDKDLREKRCFICGREGHIKKECPQFKGSSGSLSSKYMTQGKASAKRTQQES
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DDKDLREKRCFICGREGHIKKECPQFKGSSGSLSSKYMTQGKASAKRTQQES
1450 1460 1470 1480 1490
>>CCDS83383.1 ZCCHC6 gene_id:79670|Hs108|chr9 (784 aa)
initn: 4407 init1: 2871 opt: 2871 Z-score: 2122.1 bits: 404.2 E(32554): 7e-112
Smith-Waterman score: 4256; 85.1% identity (85.3% similar) in 784 aa overlap (589-1258:1-784)
560 570 580 590 600 610
pF1KE1 ATSSAANTCKVQPLTLKETAESFGSPPKEEMGNEHISVHPENSDCIQADVNSDDYKGDKV
::::::::::::::::::::::::::::::
CCDS83 MGNEHISVHPENSDCIQADVNSDDYKGDKV
10 20 30
620 630 640 650 660 670
pF1KE1 YHPETGRKNEKEKVGRKGKHLLTVDQKRGEHVVCGSTRNNESESTLDLEGFQNPTAKECE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 YHPETGRKNEKEKVGRKGKHLLTVDQKRGEHVVCGSTRNNESESTLDLEGFQNPTAKECE
40 50 60 70 80 90
680 690 700 710 720 730
pF1KE1 GLATLDNKADLDGESTEGTEELEDSLNHFTHSVQGQTSEMIPSDEEEEDDEEEEEEEEPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 GLATLDNKADLDGESTEGTEELEDSLNHFTHSVQGQTSEMIPSDEEEEDDEEEEEEEEPR
100 110 120 130 140 150
740 750 760 770 780 790
pF1KE1 LTINQREDEDGMANEDELDNTYTGSGDEDALSEEDDELGEAAKYEDVKECGKHVERALLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 LTINQREDEDGMANEDELDNTYTGSGDEDALSEEDDELGEAAKYEDVKECGKHVERALLV
160 170 180 190 200 210
800 810 820 830
pF1KE1 ELNKISLKEENVCEE-NSPVDQSDFFYEFSKLIFTKGK----------------------
::::::::::::::: ::::::::::::::::::::::
CCDS83 ELNKISLKEENVCEEKNSPVDQSDFFYEFSKLIFTKGKSPTVVCSLCKREGHLKKDCPED
220 230 240 250 260 270
pF1KE1 ------------------------------------------------------------
CCDS83 FKRIQLEPLPPLTPKFLNILDQVCIQCYKDFSPTIIEDQAREHIRQNLESFIRQDFPGTK
280 290 300 310 320 330
840 850 860
pF1KE1 -------------------------------GLDCVRTIEELARVLRKHSGLRNILPITT
:::::::::::::::::::::::::::::
CCDS83 LSLFGSSKNGFGFKQSDLDVCMTINGLETAEGLDCVRTIEELARVLRKHSGLRNILPITT
340 350 360 370 380 390
870 880 890 900 910 920
pF1KE1 AKMPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIG
::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 AKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIG
400 410 420 430 440 450
930 940 950 960 970 980
pF1KE1 DASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEEKPEIFVDGWNIYFFDQIDELP
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS83 DASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQIDELP
460 470 480 490 500 510
990 1000 1010 1020 1030 1040
pF1KE1 TYWSECGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 TYWSECGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDP
520 530 540 550 560 570
1050 1060 1070 1080 1090 1100
pF1KE1 FDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVKGFSKDYPSKMEYFFDPDVLTEGELA
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS83 FDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVKGFPKDYPSKMEYFFDPDVLTEGELA
580 590 600 610 620 630
1110 1120 1130 1140 1150 1160
pF1KE1 PNDRCCRICGKIGHFMKDCPMRRKVRRRRDQEDALNQRYPENKEKRSKEDKEIHNKYTER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 PNDRCCRICGKIGHFMKDCPMRRKVRRRRDQEDALNQRYPENKEKRSKEDKEIHNKYTER
640 650 660 670 680 690
1170 1180 1190 1200 1210 1220
pF1KE1 EVSTKEDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGREGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 EVSTKEDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGREGH
700 710 720 730 740 750
1230 1240 1250
pF1KE1 IKKECPQFKGSSGSLSSKYMTQGKASAKRTQQES
::::::::::::::::::::::::::::::::::
CCDS83 IKKECPQFKGSSGSLSSKYMTQGKASAKRTQQES
760 770 780
>>CCDS30716.1 ZCCHC11 gene_id:23318|Hs108|chr1 (1644 aa)
initn: 2561 init1: 1240 opt: 1508 Z-score: 1115.5 bits: 219.0 E(32554): 8.2e-56
Smith-Waterman score: 2266; 38.6% identity (59.7% similar) in 1232 aa overlap (165-1233:225-1376)
140 150 160 170 180 190
pF1KE1 ENEDGYRWQDTRGCRTVRRLFHKDLTSLETTSEMEAGSPENKKQRSRPRKPRKTRNEENE
... .: . . . :. .. ...... .:
CCDS30 NIEAVGGEKCALQNSPRSQKQQTCTDNTGDSDDSASGIEDVSDDLSKMKNDESNKENSSE
200 210 220 230 240 250
200 210 220 230 240 250
pF1KE1 QDGDLEGPVIDESALSTKELLGLQQAEERLKRDCIDRLKRRPRNYPTAKYTCRLCDVLIE
.: .. :::::::. .. :::.::::::.:: : ::..: .: . .: :.:: . ::
CCDS30 MDYLENATVIDESALTPEQRLGLKQAEERLERDHIFRLEKRSPEYTNCRYLCKLCLIHIE
260 270 280 290 300 310
260 270 280 290 300 310
pF1KE1 SIAFAHKHIKEKRHKKNIKEKQEEELLTTLPPPTPSQINAVGIAIDKVVQEFGLHNESLE
.: :::::::::::::: ::::: : .::::.:... :...:. ....: :. ...:.
CCDS30 NIQGAHKHIKEKRHKKNILEKQEESELRSLPPPSPAHLAALSVAVIELAKEHGITDDDLR
320 330 340 350 360 370
320 330 340 350 360
pF1KE1 QRLEIKRIMENVFQHKLPDCSLRLYGSSCSRLGFKNSDVNIDIQFP--------------
: :: . : .:. ::.::::::::: .:...:.:::::::.::
CCDS30 VRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFPPKMNHPDLLIKVLG
380 390 400 410 420 430
pF1KE1 ------------------------------------------------------------
CCDS30 ILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIEPVFI
440 450 460 470 480 490
370
pF1KE1 -------------------------------------------------AIIEGFSLSKL
. ::::. ...
CCDS30 PLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPCLLGSWIEGFDPKRM
500 510 520 530 540 550
380 390 400 410 420
pF1KE1 GNFNLQDI-EKDVVIWEHTDSAAGDTGITKEE--APRETP---IKRGQV---SLILDVKH
.:.:. : :. : :: ..:.: . . :: : . : :. .. : . ::
CCDS30 DDFQLKGIVEEKFVKWECNSSSATEKNSIAEENKAKADQPKDDTKKTETDNQSNAMKEKH
560 570 580 590 600 610
430 440 450 460 470
pF1KE1 QPS---------VPVGQLWVELLRFYALEFNLADLVISIRVKELVSRELKDWPKKRIAIE
: : .::::.:::.::.:.: : . :: .:......:: :.:::.:::::
CCDS30 GKSPLALETPNRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKRRIAIE
620 630 640 650 660 670
480 490 500 510 520 530
pF1KE1 DPYSVKRNVARTLNSQPVFEYILHCLRTTYKYFALPHKITKSSLLKPLNAITCISEHSKE
::.::::::::.:::: :.::... .:..:.::: :. ::.. ... .... .
CCDS30 DPFSVKRNVARSLNSQLVYEYVVERFRAAYRYFACPQ--TKGG---NKSTVDFKKREKGK
680 690 700 710 720
540 550 560 570 580 590
pF1KE1 VINHHPDVQTKDDKLKNSVLAQGPGATSSAANTCKVQPLTLKE---TAESFGSPPKEEMG
. :..: :.... .. .: : :. :. . ::. : :.. .. .
CCDS30 ISNKKP-VKSNNMATNGCILL---GETTEKINAEREQPVQCDEMDCTSQRCIIDNNNLLV
730 740 750 760 770 780
600 610 620 630 640
pF1KE1 NE-HISVHPENSDCIQADVNSD-----DYKGDKVYHPETGRKNEKEKVGRKGKHLLTVDQ
:: .. : ..:. .... .:. : : : . :: :.: . . . :
CCDS30 NELDFADHGQDSSSLSTSKSSEIEPKLDKKQDDLAPSETCLKKELSQCNCIDLSK-SPDP
790 800 810 820 830 840
650 660 670 680 690 700
pF1KE1 KRGEHVVCGSTRNNESESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTEELEDSL
.. . : : : :.::. . .: :. :: : .::. ... :.:: .
CCDS30 DKSTGTDCRS--NLETESS-HQSVCTDTSATSCNCKATEDA-SDLNDDDNLPTQELYYVF
850 860 870 880 890 900
710 720 730 740 750 760
pF1KE1 NHFTHSVQGQTSEMIPSDEEEEDDEEEEEEEEPRLTINQREDEDGMANE--DELDNTYTG
..: . .:. .. : ... ... :. : :. . :.:. . :: .
CCDS30 DKFILT-SGKPPTIVCSICKKDGHSKNDCPEDFR-KIDLKP-LPPMTNRFREILDLVCKR
910 920 930 940 950
770 780 790 800 810
pF1KE1 SGDEDALSEEDDELGEAAKYEDVKECGKHVERALLVELNKISLKEEN----VCEENSPVD
:: :: .: .: .. .:. :.:. :: . .: .: .
CCDS30 CFDE--LSPPCSE--------------QHNREQILIGLEKFIQKEYDEKARLCLFGS--S
960 970 980 990
820 830 840 850 860 870
pF1KE1 QSDFFYEFSKL---IFTKG----KGLDCVRTIEELARVLRKHSGLRNILPITTAKMPIVK
.. : .. : : . .: . :.: . ::.::..:..: ::::::::::::.::::
CCDS30 KNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVK
1000 1010 1020 1030 1040 1050
880 890 900 910 920 930
pF1KE1 FFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSL
: : ::::: ::::::::: ::::.:..:.::::::.:: ::::::.: :::::::::::
CCDS30 FEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSL
1060 1070 1080 1090 1100 1110
940 950 960 970 980 990
pF1KE1 SSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEEKPEIFVDGWNIYFFDQIDELPTYWSECG
::::: ::::::::::.::::::::::. :.. :. .::::: .:::. .:: :
CCDS30 SSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLG
1120 1130 1140 1150 1160 1170
1000 1010 1020 1030 1040 1050
pF1KE1 KNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNL
:::::.:.:::::::::::::::::.:::::.:.:::::.:::::: :.:::::::::::
CCDS30 KNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNL
1180 1190 1200 1210 1220 1230
1060 1070 1080 1090 1100 1110
pF1KE1 GAGLSRKMTNFIMKAFINGRRVFGIPVKGFSKDYPSKMEYFFDPDVLTEGELAPNDRCCR
:::.::::::::::::::::..:: : : . ::::: :::.:::::::::::
CCDS30 GAGVSRKMTNFIMKAFINGRKLFGTP---FYPLIGREAEYFFDSRVLTDGELAPNDRCCR
1240 1250 1260 1270 1280 1290
1120 1130 1140 1150 1160 1170
pF1KE1 ICGKIGHFMKDCPMRRKVRRRRDQEDALNQRYPENKEKRSKEDKEIHNKYTEREVSTKED
.::::::.::::: :... : :.: :.:.:: ...:.
CCDS30 VCGKIGHYMKDCPKRKSLLFRL-------------KKKDSEEEKE----------GNEEE
1300 1310 1320 1330
1180 1190 1200 1210 1220 1230
pF1KE1 KPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGREGHIKKECPQ
: : . : : . .: .: :. :::::: ::...:::.
CCDS30 K----------DSRDVLD---------PRDLHDTRDFRDPRDLRCFICGDAGHVRRECPE
1340 1350 1360 1370
1240 1250
pF1KE1 FKGSSGSLSSKYMTQGKASAKRTQQES
:
CCDS30 VKLARQRNSSVAAAQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFP
1380 1390 1400 1410 1420 1430
>>CCDS30715.1 ZCCHC11 gene_id:23318|Hs108|chr1 (1645 aa)
initn: 2532 init1: 1240 opt: 1496 Z-score: 1106.7 bits: 217.3 E(32554): 2.5e-55
Smith-Waterman score: 2263; 38.6% identity (59.8% similar) in 1232 aa overlap (165-1233:225-1377)
140 150 160 170 180 190
pF1KE1 ENEDGYRWQDTRGCRTVRRLFHKDLTSLETTSEMEAGSPENKKQRSRPRKPRKTRNEENE
... .: . . . :. .. ...... .:
CCDS30 NIEAVGGEKCALQNSPRSQKQQTCTDNTGDSDDSASGIEDVSDDLSKMKNDESNKENSSE
200 210 220 230 240 250
200 210 220 230 240 250
pF1KE1 QDGDLEGPVIDESALSTKELLGLQQAEERLKRDCIDRLKRRPRNYPTAKYTCRLCDVLIE
.: .. :::::::. .. :::.::::::.:: : ::..: .: . .: :.:: . ::
CCDS30 MDYLENATVIDESALTPEQRLGLKQAEERLERDHIFRLEKRSPEYTNCRYLCKLCLIHIE
260 270 280 290 300 310
260 270 280 290 300 310
pF1KE1 SIAFAHKHIKEKRHKKNIKEKQEEELLTTLPPPTPSQINAVGIAIDKVVQEFGLHNESLE
.: :::::::::::::: ::::: : .::::.:... :...:. ....: :. ...:.
CCDS30 NIQGAHKHIKEKRHKKNILEKQEESELRSLPPPSPAHLAALSVAVIELAKEHGITDDDLR
320 330 340 350 360 370
320 330 340 350 360
pF1KE1 QRLEIKRIMENVFQHKLPDCSLRLYGSSCSRLGFKNSDVNIDIQFP--------------
: :: . : .:. ::.::::::::: .:...:.:::::::.::
CCDS30 VRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFPPKMNHPDLLIKVLG
380 390 400 410 420 430
pF1KE1 ------------------------------------------------------------
CCDS30 ILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIEPVFI
440 450 460 470 480 490
370
pF1KE1 -------------------------------------------------AIIEGFSLSKL
. ::::. ...
CCDS30 PLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPCLLGSWIEGFDPKRM
500 510 520 530 540 550
380 390 400 410 420
pF1KE1 GNFNLQDI-EKDVVIWEHTDSAAGDTGITKEE--APRETP---IKRGQV---SLILDVKH
.:.:. : :. : :: ..:.: . . :: : . : :. .. : . ::
CCDS30 DDFQLKGIVEEKFVKWECNSSSATEKNSIAEENKAKADQPKDDTKKTETDNQSNAMKEKH
560 570 580 590 600 610
430 440 450 460 470
pF1KE1 QPS---------VPVGQLWVELLRFYALEFNLADLVISIRVKELVSRELKDWPKKRIAIE
: : .::::.:::.::.:.: : . :: .:......:: :.:::.:::::
CCDS30 GKSPLALETPNRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKRRIAIE
620 630 640 650 660 670
480 490 500 510 520 530
pF1KE1 DPYSVKRNVARTLNSQPVFEYILHCLRTTYKYFALPHKITKSSLLKPLNAITCISEHSKE
::.::::::::.:::: :.::... .:..:.::: :. ::.. ... .... .
CCDS30 DPFSVKRNVARSLNSQLVYEYVVERFRAAYRYFACPQ--TKGG---NKSTVDFKKREKGK
680 690 700 710 720
540 550 560 570 580 590
pF1KE1 VINHHPDVQTKDDKLKNSVLAQGPGATSSAANTCKVQPLTLKE---TAESFGSPPKEEMG
. :..: :.... .. .: : :. :. . ::. : :.. .. .
CCDS30 ISNKKP-VKSNNMATNGCILL---GETTEKINAEREQPVQCDEMDCTSQRCIIDNNNLLV
730 740 750 760 770 780
600 610 620 630 640
pF1KE1 NE-HISVHPENSDCIQADVNSD-----DYKGDKVYHPETGRKNEKEKVGRKGKHLLTVDQ
:: .. : ..:. .... .:. : : : . :: :.: . . . :
CCDS30 NELDFADHGQDSSSLSTSKSSEIEPKLDKKQDDLAPSETCLKKELSQCNCIDLSK-SPDP
790 800 810 820 830 840
650 660 670 680 690 700
pF1KE1 KRGEHVVCGSTRNNESESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTEELEDSL
.. . : : : :.::. . .: :. :: : .::. ... :.:: .
CCDS30 DKSTGTDCRS--NLETESS-HQSVCTDTSATSCNCKATEDA-SDLNDDDNLPTQELYYVF
850 860 870 880 890 900
710 720 730 740 750 760
pF1KE1 NHFTHSVQGQTSEMIPSDEEEEDDEEEEEEEEPRLTINQREDEDGMANE--DELDNTYTG
..: . .:. .. : ... ... :. : :. . :.:. . :: .
CCDS30 DKFILT-SGKPPTIVCSICKKDGHSKNDCPEDFR-KIDLKP-LPPMTNRFREILDLVCKR
910 920 930 940 950
770 780 790 800 810
pF1KE1 SGDEDALSEEDDELGEAAKYEDVKECGKHVERALLVELNKISLKEEN----VCEENSPVD
:: :: .: .: .. .:. :.:. :: . .: .: .
CCDS30 CFDE--LSPPCSE--------------QHNREQILIGLEKFIQKEYDEKARLCLFGS--S
960 970 980 990
820 830 840 850 860 870
pF1KE1 QSDFFYEFSKL---IFTKG----KGLDCVRTIEELARVLRKHSGLRNILPITTAKMPIVK
.. : .. : : . .: . :.: . ::.::..:..: ::::::::::::.::::
CCDS30 KNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVK
1000 1010 1020 1030 1040 1050
880 890 900 910 920 930
pF1KE1 FFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSL
: : ::::: ::::::::: ::::.:..:.::::::.:: ::::::.: :::::::::::
CCDS30 FEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSL
1060 1070 1080 1090 1100 1110
940 950 960 970 980 990
pF1KE1 SSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEEKPEIFVDGWNIYFFDQIDELPTYWSECG
::::: ::::::::::.::::::::::. :.. :. .::::: .:::. .:: :
CCDS30 SSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLG
1120 1130 1140 1150 1160 1170
1000 1010 1020 1030 1040 1050
pF1KE1 KNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNL
:::::.:.:::::::::::::::::.:::::.:.:::::.:::::: :.:::::::::::
CCDS30 KNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNL
1180 1190 1200 1210 1220 1230
1060 1070 1080 1090 1100 1110
pF1KE1 GAGLSRKMTNFIMKAFINGRRVFGIPVKGFSKDYPSKMEYFFDPDVLTEGELAPNDRCCR
:::.::::::::::::::::..:: : : . ::::: :::.:::::::::::
CCDS30 GAGVSRKMTNFIMKAFINGRKLFGTP---FYPLIGREAEYFFDSRVLTDGELAPNDRCCR
1240 1250 1260 1270 1280 1290
1120 1130 1140 1150 1160 1170
pF1KE1 ICGKIGHFMKDCPMRRKVRRRRDQEDALNQRYPENKEKRSKEDKEIHNKYTEREVSTKED
.::::::.::::: :.. .: : :.: :.:.:: ...:.
CCDS30 VCGKIGHYMKDCPKRKS---------SLLFRL---KKKDSEEEKE----------GNEEE
1300 1310 1320 1330
1180 1190 1200 1210 1220 1230
pF1KE1 KPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGREGHIKKECPQ
: : . : : . .: .: :. :::::: ::...:::.
CCDS30 K----------DSRDVLD---------PRDLHDTRDFRDPRDLRCFICGDAGHVRRECPE
1340 1350 1360 1370
1240 1250
pF1KE1 FKGSSGSLSSKYMTQGKASAKRTQQES
:
CCDS30 VKLARQRNSSVAAAQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFP
1380 1390 1400 1410 1420 1430
>>CCDS75266.1 PAPD4 gene_id:167153|Hs108|chr5 (480 aa)
initn: 400 init1: 253 opt: 408 Z-score: 314.2 bits: 68.9 E(32554): 3.5e-11
Smith-Waterman score: 408; 36.4% identity (67.0% similar) in 206 aa overlap (865-1068:258-455)
840 850 860 870 880 890
pF1KE1 KGLDCVRTIEELARVLRKHSGLRNILPITTAKMPIVKFFHLRSGLEVDISLYNTLALHNT
::.::::: : .: :... : ....::
CCDS75 KTEARHILTLVHKHFCTRLSGYIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNT
230 240 250 260 270 280
900 910 920 930 940 950
pF1KE1 RLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPV
:: .:. .. ::. : ..: ... .:.:::::.::::. .::::..:: :..:
CCDS75 FLLRTYAYLENRVRPLVLVIKKWASHHQINDASRGTLSSYSLVLMVLHYLQTLPEPILPS
290 300 310 320 330 340
960 970 980 990 1000 1010
pF1KE1 LQEIYKGEEKPEIFVDGWNIYFFDQID-ELPTYWSECGKNTESVGQLWLGLLRFYTEEFD
::.:: :: : . .... : ..: : : :: ..:.: ::.:..:. :::
CCDS75 LQKIY-----PESFSPAIQLHLVHQAPCNVPPYLS---KNESNLGDLLLGFLKYYATEFD
350 360 370 380 390
1020 1030 1040 1050 1060 1070
pF1KE1 FKEHVISIRR-KSLLTTFKKQWTSKYIVIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRR
.. ..::.:. :.. .: .::: .:.::: ... : .. ..: :.
CCDS75 WNSQMISVREAKAIPRPDGIEWRNKYICVEEPFDGTNTARAVHEKQKFDMIKDQFLKSWH
400 410 420 430 440 450
1080 1090 1100 1110 1120 1130
pF1KE1 VFGIPVKGFSKDYPSKMEYFFDPDVLTEGELAPNDRCCRICGKIGHFMKDCPMRRKVRRR
CCDS75 RLKNKRDLNSILPVRAAVLKR
460 470 480
>>CCDS4048.1 PAPD4 gene_id:167153|Hs108|chr5 (484 aa)
initn: 400 init1: 253 opt: 408 Z-score: 314.1 bits: 68.9 E(32554): 3.5e-11
Smith-Waterman score: 408; 36.4% identity (67.0% similar) in 206 aa overlap (865-1068:262-459)
840 850 860 870 880 890
pF1KE1 KGLDCVRTIEELARVLRKHSGLRNILPITTAKMPIVKFFHLRSGLEVDISLYNTLALHNT
::.::::: : .: :... : ....::
CCDS40 KTEARHILTLVHKHFCTRLSGYIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNT
240 250 260 270 280 290
900 910 920 930 940 950
pF1KE1 RLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPV
:: .:. .. ::. : ..: ... .:.:::::.::::. .::::..:: :..:
CCDS40 FLLRTYAYLENRVRPLVLVIKKWASHHQINDASRGTLSSYSLVLMVLHYLQTLPEPILPS
300 310 320 330 340 350
960 970 980 990 1000 1010
pF1KE1 LQEIYKGEEKPEIFVDGWNIYFFDQID-ELPTYWSECGKNTESVGQLWLGLLRFYTEEFD
::.:: :: : . .... : ..: : : :: ..:.: ::.:..:. :::
CCDS40 LQKIY-----PESFSPAIQLHLVHQAPCNVPPYLS---KNESNLGDLLLGFLKYYATEFD
360 370 380 390 400
1020 1030 1040 1050 1060 1070
pF1KE1 FKEHVISIRR-KSLLTTFKKQWTSKYIVIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRR
.. ..::.:. :.. .: .::: .:.::: ... : .. ..: :.
CCDS40 WNSQMISVREAKAIPRPDGIEWRNKYICVEEPFDGTNTARAVHEKQKFDMIKDQFLKSWH
410 420 430 440 450 460
1080 1090 1100 1110 1120 1130
pF1KE1 VFGIPVKGFSKDYPSKMEYFFDPDVLTEGELAPNDRCCRICGKIGHFMKDCPMRRKVRRR
CCDS40 RLKNKRDLNSILPVRAAVLKR
470 480
1258 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 23:15:56 2016 done: Sat Nov 5 23:15:57 2016
Total Scan time: 5.500 Total Display time: 0.330
Function used was FASTA [36.3.4 Apr, 2011]