Result of FASTA (ccds) for pF1KE0340
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0340, 507 aa
  1>>>pF1KE0340 507 - 507 aa - 507 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3951+/-0.000823; mu= 18.4953+/- 0.049
 mean_var=76.5985+/-15.244, 0's: 0 Z-trim(107.4): 14  B-trim: 0 in 0/54
 Lambda= 0.146543
 statistics sampled from 9567 (9576) to 9567 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.665), E-opt: 0.2 (0.294), width:  16
 Scan time:  3.250

The best scores are:                                      opt bits E(32554)
CCDS14007.1 XPNPEP3 gene_id:63929|Hs108|chr22      ( 507) 3450 738.9  3e-213
CCDS42544.1 PEPD gene_id:5184|Hs108|chr19          ( 493)  464 107.6 3.2e-23
CCDS54244.1 PEPD gene_id:5184|Hs108|chr19          ( 429)  376 89.0 1.1e-17
CCDS54245.1 PEPD gene_id:5184|Hs108|chr19          ( 452)  316 76.3 7.9e-14


>>CCDS14007.1 XPNPEP3 gene_id:63929|Hs108|chr22           (507 aa)
 initn: 3450 init1: 3450 opt: 3450  Z-score: 3941.9  bits: 738.9 E(32554): 3e-213
Smith-Waterman score: 3450; 100.0% identity (100.0% similar) in 507 aa overlap (1-507:1-507)

               10        20        30        40        50        60
pF1KE0 MPWLLSAPKLVPAVANVRGLSGCMLCSQRRYSLQPVPERRIPNRYLGQPSPFTHPHLLRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MPWLLSAPKLVPAVANVRGLSGCMLCSQRRYSLQPVPERRIPNRYLGQPSPFTHPHLLRP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 GEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLSNPTYYMSNDIPYTFHQDNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLSNPTYYMSNDIPYTFHQDNN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 FLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPSRELWDGPRSGTDGAIALTGVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPSRELWDGPRSGTDGAIALTGVD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 EAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYMQPLTEAKAKSKNKVRGVQQLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYMQPLTEAKAKSKNKVRGVQQLI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 QRLRLIKSPAEIERMQIAGKLTSQAFIETMFTSKAPVEEAFLYAKFEFECRARGADILAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QRLRLIKSPAEIERMQIAGKLTSQAFIETMFTSKAPVEEAFLYAKFEFECRARGADILAY
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 PPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQAEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 PPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQAEL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 YEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMKNIKENNAFKAARKYCPH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 YEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMKNIKENNAFKAARKYCPH
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 HVGHYLGMDVHDTPDMPRSLPLQPGMVITIEPGIYIPEDDKDAPEKFRGLGVRIEDDVVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HVGHYLGMDVHDTPDMPRSLPLQPGMVITIEPGIYIPEDDKDAPEKFRGLGVRIEDDVVV
              430       440       450       460       470       480

              490       500       
pF1KE0 TQDSPLILSADCPKEMNDIEQICSQAS
       :::::::::::::::::::::::::::
CCDS14 TQDSPLILSADCPKEMNDIEQICSQAS
              490       500       

>>CCDS42544.1 PEPD gene_id:5184|Hs108|chr19               (493 aa)
 initn: 383 init1: 130 opt: 464  Z-score: 530.3  bits: 107.6 E(32554): 3.2e-23
Smith-Waterman score: 572; 29.3% identity (57.1% similar) in 468 aa overlap (72-500:23-476)

              50        60        70        80        90       100 
pF1KE0 PNRYLGQPSPFTHPHLLRPGEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLS
                                     .:: :..:   ..:.   :.:.   .:::.
CCDS42         MAAATGPSFWLGNETLKVPLALFALNRQRLCERLRKNPAVQAGS---IVVLQ
                       10        20        30        40            

               110       120       130       140       150         
pF1KE0 N--PTYYMSNDIPYTFHQDNNFLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPS
       .   :  . .:    :.:.. : .  :  ::    :..   ::      . :::::   :
CCDS42 GGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDTGK------STLFVPRLPAS
      50        60        70        80        90             100   

     160       170       180       190       200       210         
pF1KE0 RELWDGPRSGTDGAIALTGVDEAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYM
       .  : :   . .      .::..  ..:.  .: ..:  . ..    .:  ...  :   
CCDS42 HATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQKPSVLLT----LRGVNTDSGSVCR
           110       120       130       140           150         

     220       230       240       250       260       270         
pF1KE0 QPLTEAKAKSKNKVRGVQQLIQRLRLIKSPAEIERMQIAGKLTSQAFIETMFTSKAPVEE
       .   .. .: . .   ..  : . :..:.  :.: .. ..:..:.:  :.: . :. ..:
CCDS42 EASFDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKE
     160       170       180       190       200       210         

     280       290        300       310           320       330    
pF1KE0 AFLYAKFEFECRARGA-DILAYPPVVAGGNRSNTLHY----VKNNQLIKDGEMVLLDGGC
         : . ::  : .::.    .:  . ..:. : .:::    . :.. :..:.: :.: : 
CCDS42 YELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGG
     220       230       240       250       260       270         

          340       350       360       370       380       390    
pF1KE0 ESSCYVSDITRTWPVNGRFTAPQAELYEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQ
       :  :..:::: ..:.::.::: :  .:::::. .:  ..   ::.   ... .   .  .
CCDS42 EYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLE
     280       290       300       310       320       330         

          400        410       420       430                  440  
pF1KE0 KLKDLGIMK-NIKENNAFKAARKYCPHHVGHYLGMDVHDTPDMP-----------RSL--
       .:  .::.. ..      . .  . :: .::.::.::::.  .:           :::  
CCDS42 ELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRT
     340       350       360       370       380       390         

                450                      460       470        480  
pF1KE0 --PLQPGMVITIEPGIYIPED---------------DKDAPEKFRGLG-VRIEDDVVVTQ
          ::::::.:.:::::. .                .... ..:::.: ::::.::::: 
CCDS42 ARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVT-
     400       410       420       430       440       450         

            490       500                 
pF1KE0 DSPLILSADCPKEMNDIEQICSQAS          
       :: . : .  :. ...::                 
CCDS42 DSGIELLTCVPRTVEEIEACMAGCDKAFTPFSGPK
      460       470       480       490   

>>CCDS54244.1 PEPD gene_id:5184|Hs108|chr19               (429 aa)
 initn: 339 init1: 130 opt: 376  Z-score: 430.7  bits: 89.0 E(32554): 1.1e-17
Smith-Waterman score: 484; 33.7% identity (61.6% similar) in 294 aa overlap (244-500:120-412)

           220       230       240       250       260       270   
pF1KE0 LHSDYMQPLTEAKAKSKNKVRGVQQLIQRLRLIKSPAEIERMQIAGKLTSQAFIETMFTS
                                     :..:.  :.: .. ..:..:.:  :.: . 
CCDS54 SGSVCREASFDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAV
      90       100       110       120       130       140         

           280       290        300       310           320        
pF1KE0 KAPVEEAFLYAKFEFECRARGA-DILAYPPVVAGGNRSNTLHY----VKNNQLIKDGEMV
       :. ..:  : . ::  : .::.    .:  . ..:. : .:::    . :.. :..:.: 
CCDS54 KVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMC
     150       160       170       180       190       200         

      330       340       350       360       370       380        
pF1KE0 LLDGGCESSCYVSDITRTWPVNGRFTAPQAELYEAVLEIQRDCLALCFPGTSLENIYSMM
       :.: : :  :..:::: ..:.::.::: :  .:::::. .:  ..   ::.   ... . 
CCDS54 LFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLA
     210       220       230       240       250       260         

      390       400        410       420       430                 
pF1KE0 LTLIGQKLKDLGIMK-NIKENNAFKAARKYCPHHVGHYLGMDVHDTPDMP----------
         .  ..:  .::.. ..      . .  . :: .::.::.::::.  .:          
CCDS54 DRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPG
     270       280       290       300       310       320         

        440           450                      460       470       
pF1KE0 -RSL----PLQPGMVITIEPGIYIPED---------------DKDAPEKFRGLG-VRIED
        :::     ::::::.:.:::::. .                .... ..:::.: ::::.
CCDS54 LRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEE
     330       340       350       360       370       380         

        480       490       500                 
pF1KE0 DVVVTQDSPLILSADCPKEMNDIEQICSQAS          
       ::::: :: . : .  :. ...::                 
CCDS54 DVVVT-DSGIELLTCVPRTVEEIEACMAGCDKAFTPFSGPK
     390        400       410       420         

>>CCDS54245.1 PEPD gene_id:5184|Hs108|chr19               (452 aa)
 initn: 383 init1: 130 opt: 316  Z-score: 361.8  bits: 76.3 E(32554): 7.9e-14
Smith-Waterman score: 453; 27.6% identity (51.5% similar) in 468 aa overlap (72-500:23-435)

              50        60        70        80        90       100 
pF1KE0 PNRYLGQPSPFTHPHLLRPGEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLS
                                     .:: :..:   ..:.   :.:.   .:::.
CCDS54         MAAATGPSFWLGNETLKVPLALFALNRQRLCERLRKNPAVQAGS---IVVLQ
                       10        20        30        40            

               110       120       130       140       150         
pF1KE0 N--PTYYMSNDIPYTFHQDNNFLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPS
       .   :  . .:    :.:.. : .  :  ::    :..   ::      . :::::   :
CCDS54 GGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDTGK------STLFVPRLPAS
      50        60        70        80        90             100   

     160       170       180       190       200       210         
pF1KE0 RELWDGPRSGTDGAIALTGVDEAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYM
       .  : :   . .      .::..  ..:.  .: ..:            ::        .
CCDS54 HATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQK------------PS-------VL
           110       120       130       140                       

     220       230       240       250       260       270         
pF1KE0 QPLTEAKAKSKNKVRGVQQLIQRLRLIKSPAEIERMQIAGKLTSQAFIETMFTSKAPVEE
         :  ... : .  : .           :   : .... . .    ..: .         
CCDS54 LTLRGVNTDSGSVCREA-----------SFDGISKFEVNNTILHPEIVECL---------
          150       160                  170       180             

     280       290        300       310           320       330    
pF1KE0 AFLYAKFEFECRARGA-DILAYPPVVAGGNRSNTLHY----VKNNQLIKDGEMVLLDGGC
             ::  : .::.    .:  . ..:. : .:::    . :.. :..:.: :.: : 
CCDS54 ------FEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGG
                190       200       210       220       230        

          340       350       360       370       380       390    
pF1KE0 ESSCYVSDITRTWPVNGRFTAPQAELYEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQ
       :  :..:::: ..:.::.::: :  .:::::. .:  ..   ::.   ... .   .  .
CCDS54 EYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLE
      240       250       260       270       280       290        

          400        410       420       430                  440  
pF1KE0 KLKDLGIMK-NIKENNAFKAARKYCPHHVGHYLGMDVHDTPDMP-----------RSL--
       .:  .::.. ..      . .  . :: .::.::.::::.  .:           :::  
CCDS54 ELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRT
      300       310       320       330       340       350        

                450                      460       470        480  
pF1KE0 --PLQPGMVITIEPGIYIPED---------------DKDAPEKFRGLG-VRIEDDVVVTQ
          ::::::.:.:::::. .                .... ..:::.: ::::.::::: 
CCDS54 ARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVT-
      360       370       380       390       400       410        

            490       500                 
pF1KE0 DSPLILSADCPKEMNDIEQICSQAS          
       :: . : .  :. ...::                 
CCDS54 DSGIELLTCVPRTVEEIEACMAGCDKAFTPFSGPK
       420       430       440       450  




507 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 15:13:11 2016 done: Thu Nov  3 15:13:11 2016
 Total Scan time:  3.250 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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