GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:53:46

Sequence gi568815592f:142047288_142318640 : 271353 bp : 36.37% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2407   2444   38  0  2   95   72    31 0.298   1.76
 1.02 Term +  15448  15619  172  1  1   23   45   231 0.870   8.62
 1.03 PlyA +  16411  16416    6                               1.05

 2.05 PlyA -  16525  16520    6                               1.05
 2.04 Term -  25021  24875  147  1  0  103   36    71 0.402   0.32
 2.03 Intr -  28762  28457  306  1  0   75   74    95 0.497   2.52
 2.02 Intr -  31616  31268  349  1  1   64  115   231 0.277  17.83
 2.01 Init -  41371  40950  422  1  2   79  110   421 0.099  39.31
 2.00 Prom -  46350  46311   40                              -1.45

 3.03 PlyA -  46989  46984    6                               1.05
 3.02 Term -  48369  47287 1083  0  0  -33   38   456 0.524  19.61
 3.01 Init -  61882  61754  129  1  0   73   64   125 0.337   8.80
 3.00 Prom -  64028  63989   40                              -5.05

 4.00 Prom +  65941  65980   40                              -4.95
 4.01 Init +  68309  68375   67  1  1   73   74    89 0.682   7.29
 4.02 Intr +  81046  81245  200  2  2   66  107    41 0.034   1.95
 4.03 Intr +  86563  86745  183  0  0   39  108    51 0.003   1.26
 4.04 Intr +  97217  97313   97  1  1  116   51    63 0.005   4.06
 4.05 Intr +  99945 100112  168  1  0   49   74    80 0.003   1.70
 4.06 Intr + 118941 119035   95  1  2  106   87    48 0.290   5.26
 4.07 Intr + 122263 122390  128  0  2   57  108   144 0.995  11.86
 4.08 Intr + 123059 123134   76  2  1  107   81    50 0.956   4.80
 4.09 Intr + 142139 142247  109  1  1   54   80    71 0.417   1.84
 4.10 Intr + 151152 151328  177  1  0   45   75   181 0.967  11.47
 4.11 Intr + 156698 156778   81  0  0  111  110    49 0.986   8.09
 4.12 Intr + 159756 159863  108  1  0   25   13   153 0.550   0.84
 4.13 Term + 160040 160179  140  0  2   83   49   102 0.882   2.94
 4.14 PlyA + 160375 160380    6                               1.05

 5.04 PlyA - 163938 163933    6                               1.05
 5.03 Term - 166571 165834  738  2  0   54   32   326 0.154  16.07
 5.02 Intr - 173963 173709  255  2  0   75   75    88 0.005   2.92
 5.01 Init - 184015 183347  669  1  0   58   38   198 0.163   7.04
 5.00 Prom - 219265 219226   40                              -4.85

 6.03 PlyA - 220380 220375    6                               1.05
 6.02 Term - 221996 221809  188  0  2   80   41   150 0.849   6.17
 6.01 Init - 222796 222709   88  1  1   98   33    37 0.380   0.05
 6.00 Prom - 229625 229586   40                              -5.05

 7.00 Prom + 230876 230915   40                              -6.15
 7.01 Init + 231094 231260  167  0  2   90   94    96 0.881   9.55
 7.02 Intr + 232882 232919   38  1  2   56   83    19 0.367  -4.81
 7.03 Term + 234335 234987  653  0  2   68   43   222 0.765   8.91
 7.04 PlyA + 236355 236360    6                               1.05

 8.03 PlyA - 236548 236543    6                               1.05
 8.02 Term - 254622 254117  506  1  2   38   32   257 0.474   8.72
 8.01 Intr - 254958 254778  181  0  1   72   72   109 0.477   6.22

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 100081  99757  325  1  1   46   62   249 0.869  13.70
S.002 Term + 171211 171356  146  2  2  110   48   202 0.964  15.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:142047288_142318640|GENSCAN_predicted_peptide_1|69_aa
MGINQGVVTAGIGEDLGKDVEFEVVGDAPEKVGPKQAEDAAKSITKGSDDGAQPSTSTAQ
EQDDVLIVD

>gi568815592f:142047288_142318640|GENSCAN_predicted_CDS_1|210_bp
atgggcattaaccagggagtggttacagcaggcattggtgaagacctaggaaaggatgtt
gaatttgaagttgttggtgatgccccagaaaaagtggggcccaaacaagctgaagatgct
gccaaaagcataaccaaaggcagtgatgatggagctcagccctccacctccacagctcaa
gagcaagatgatgttctcatagttgattag

>gi568815592f:142047288_142318640|GENSCAN_predicted_peptide_2|407_aa
MPSKSLSNLSVTTGANESGSVPEGWERDFLPASDGTTTELVIRCVIPSLYLLIITVGLLG
NIMLVKIFITNSAMRSVPNIFISNLAAGDLLLLLTCVPVDASRYFFDEWMFGKVGCKLIP
VIQLTSVGVSVFTLTALSADRYRAIVNPMDMQTSGALLRTCVKAMGIWVVSVLLAVPEAV
FSEVARISSLDNSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLAIISIYYYHIAKTLI
KSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMYRSFNYNEIDPSL
GHMIVTLVARVLSFGNSCVNPFALYLLSESFRRHFNSQLCCGRKSYQERGTSYLLSSSAV
MPIPEVCLHSLGQLCVCGFASIALYWLLSWAGVKYLWLFQVHVASYL

>gi568815592f:142047288_142318640|GENSCAN_predicted_CDS_2|1224_bp
atgccctctaagtctctttccaacctctcggtgaccaccggcgcgaatgagagcggttcc
gttcccgaggggtgggaaagggatttcctgccggcctcggacgggaccaccacggagttg
gtgatccgctgtgtgatcccgtccctctacctgctcatcatcaccgtgggcttgctgggc
aacatcatgctggtgaagatcttcatcaccaacagcgccatgaggagcgtccccaacatc
ttcatctctaacctggcggccggggacttgctgctgctgctcacctgcgtcccggtggac
gcctcgcgctacttcttcgacgagtggatgtttggcaaggtgggctgcaaactgatccct
gtcatccagctcacttccgtgggggtttccgtgttcactctcactgccctcagcgccgac
aggtacagagccatcgttaaccccatggacatgcagacgtcaggggcattgctgcggacc
tgtgtgaaggccatgggtatctgggtggtctccgtgttgctggcagttcccgaagcggtg
ttttcagaagtggctcgcatcagtagcttggataatagcagcttcacagcatgtatccca
taccctcaaacagatgaattacatccaaagattcattcagtgctcattttcttggtctat
ttcctcataccacttgctattattagcatttattattatcatattgcaaagaccttaatt
aaaagcgcacacaatcttcctggagaatacaatgaacataccaaaaaacagatggaaaca
cggaaacgcctggctaaaattgtgcttgtctttgtgggctgtttcatcttctgttggttt
ccaaaccacatcctttacatgtatcggtctttcaactataatgagattgatccatctcta
ggccacatgattgtcaccttagttgcccgggttctcagttttggcaattcttgtgtcaac
ccatttgctctttacctactcagtgaaagcttcaggaggcatttcaacagccaactctgc
tgtgggaggaagtcctatcaagagagaggaaccagctacctactcagctcttcagcggtc
atgccgataccagaggtgtgcttacacagccttgggcagctctgcgtctgtggctttgcg
agtatagccctctactggctgctttcatgggctggtgttaagtatctgtggcttttccag
gtgcatgttgcaagctatttgtag

>gi568815592f:142047288_142318640|GENSCAN_predicted_peptide_3|403_aa
MCLKSLRLAMQAMKTAEAGSCTLQSHRVGAAQGCGSPPHASAEHHPDTKAWQRHKKKENF
RPISLRNINAKILNEILANRIQQHIKKLIHHDQVGFIPGMQGWFNICKSINIIQYINRTN
DKNHMIISIDAEKALDKIQQHFMLKSLNKLGIDGTYLQIIRAIYDKPTANIILNGQKPEA
FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLEN
PIVSAQNLLKRIGNSSKFSGYKINVQKSQAFLYTNNRQTENQIMSEFPFTIASKRIKYLG
IQLTRDVKDLFKENYKPLLNEIKEDTKKWKNIPCSWVGRINIVEMDILPKVIYRFNAIPI
KLPMTFFKELEKNSFKVHMEPKKSPHSQVNPKPKEQSCRHHLT

>gi568815592f:142047288_142318640|GENSCAN_predicted_CDS_3|1212_bp
atgtgcctgaaaagcctcagactcgcaatgcaagctatgaaaacagctgaagcagggagc
tgtaccctgcaaagccacagggttggagctgcccaaggctgtggaagcccacctcatgca
tcagctgagcatcatcctgataccaaagcctggcagagacacaagaaaaaagagaatttt
agaccaatatccctgaggaacatcaatgcaaaaatcctcaatgaaatactagcaaaccga
atccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatg
caaggctggttcaacatatgcaaatcaataaacataatccagtatataaacagaaccaat
gacaaaaaccacatgattatctcaatagatgcagaaaaggccttggacaaaattcaacaa
cacttcatgctaaaatctctcaataaattaggtattgatgggacgtatctccaaataatc
agagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaaccggaagca
ttccctttaaaaactggcacaagacagggatgccctctctcaccactcctattcaacata
gtgttggaagttctggccagggcaattaggcaggagaaggaaataaagggtattcaatta
ggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatctagaaaac
cccattgtctcagcccaaaatctccttaagcggataggcaactccagcaaattctcagga
tacaaaatcaatgtgcaaaaatcacaagcattcttatacaccaataacagacaaacagag
aaccaaatcatgagtgaattcccattcacaattgcttcaaagagaataaaatacctagga
atccagcttacaagggacgtgaaggacctcttcaaggagaactacaaaccactgctcaat
gaaataaaagaggatacaaagaaatggaagaacattccatgctcatgggtaggaagaatc
aatatcgtggaaatggacatactgcccaaggtaatttatagattcaatgccatccccatc
aagctaccaatgactttcttcaaagaattggaaaaaaactcctttaaagttcatatggaa
ccaaaaaagagcccgcatagccaagtcaatcctaagccaaaagaacaaagctgcaggcat
caccttacctga

>gi568815592f:142047288_142318640|GENSCAN_predicted_peptide_4|542_aa
MEKLLRLDLNYTSVEVVEMEKRAMHEQASTDIFLGPIALVMTSSTMLNISGKCGHPYFVL
DLRGKACSFFSIDYDVSSGLFIYGLYYVEVKPPTVIGQFHTLFFGSIRIFFLGVLGFAVY
GNEALHFICDPDKREVNLFCYNQFRPITPQLCPPLTCQGSSPVLEGDVRSFRNWSEMNGE
EEYGSGSAGGARVGSGEFGVEMAALAPLPPLPAQFKSIQHHLRTAQEHDKRDPVVAYYCR
LYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFL
YADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNG
ETPQAGPVGIEEDNDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAH
APANTPAEVPHSTGVASNTIQPTPQTIPAIDPALFNTISQENEKQIYSTEIDTSNNPEPK
YEDEIVPGATEKWKNSSSIMTACRENITEDQQRLLFPAPETSLCNLAKGDTKSEWLFSST
ML

>gi568815592f:142047288_142318640|GENSCAN_predicted_CDS_4|1629_bp
atggagaaacttttaaggctagacctgaactacactagtgtagaagtggtggaaatggag
aagagagcaatgcatgaacaggctagtacagatatctttttgggtccaattgctctggtt
atgacttctagtactatgttgaatataagtggcaaatgtgggcatccttactttgtactg
gatcttagaggaaaagcttgcagttttttttccattgattatgatgttagcagtgggctt
ttcatatatggcctttattatgttgaggttaaacctccaactgtgattggtcaattccac
acccttttctttggatcgatccgaatattcttcctcggggtgctaggctttgcagtttat
gggaatgaggccttgcacttcatttgcgatccagacaaaagagaagtaaacctcttctgt
tacaatcagttcaggccaatcactccacaactctgccctccccttacttgccaaggttct
agcccagtcctagagggtgatgtcagatccttcagaaactggtctgagatgaatggagaa
gaagaatacggaagcggaagtgccggtggagcgcgagtaggaagtggtgagttcggagta
gagatggccgcgcttgcaccgctgcccccgctccccgcacagttcaagagcatacagcat
catctgaggacggctcaggagcatgacaagcgagaccctgtggtggcttattactgtcgt
ttatacgcaatgcagactggaatgaagatcgatagtaaaactcctgaatgtcgcaaattt
ttatcaaagttaatggatcagttagaagctctaaagaagcagttgggtgataatgaagct
attactcaagaaatagtgggctgtgcccatttggagaattatgctttgaaaatgtttttg
tatgcagacaatgaagatcgtgctggacgatttcacaaaaacatgatcaagtccttctat
actgcaagtcttttgatagatgtcataacagtatttggagaactcactgatgaaaatgtg
aaacacaggaagtatgccagatggaaggcaacatacatccataattgtttaaagaatggg
gagactcctcaagcaggccctgttggaattgaagaagataatgatattgaagaaaatgaa
gatgctggagcagcctctctgcccactcagccaactcagccatcatcatcttcaacttat
gacccaagcaacatgccatcaggcaactatactggaatacagattcctccgggtgcacac
gctccagctaatacaccagcagaagtgcctcacagcacaggtgtagcaagtaatactatc
caacctactccacagactatacctgccattgatcccgcacttttcaatacaatttcccag
gaaaacgaaaaacaaatatacagcactgagattgacaccagcaacaacccagagcccaag
tatgaggatgaaatagttcctggggccacagagaagtggaaaaactccagtagcatcatg
actgcctgcagggaaaatatcactgaagaccagcagagactattattcccagccccagaa
acttcactgtgcaacttggccaaaggagacaccaaatcagaatggctgttcagcagtacc
atgctgtag

>gi568815592f:142047288_142318640|GENSCAN_predicted_peptide_5|553_aa
MIVYLENPIVSAPNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSGCPFTITA
KRIKYLGIQLTRDVKDLFKENYKPVLNKIKEDTNKWKSISCSWIGRINIMKRAILPKVTY
TFNAIPIKLPLTSFTELEKTTLKFIWNQKRARIAKTILSKKNKAGGITLPDFKLYYKCTV
TKTAWCQYQNRYIDQWNRTEASEITPHIYNHLIFDKPDKNKQWHLSLFNTEVPIVWSPEL
SSKFAGDADAGRPETPLRTGLRRISFLRLAIFLIWVELNHSNFRDHLKCLLKLRRLGPIP
RVSDWVGQVGDLEGKNGSMSQIQGQLLCVALGHGTPAAPAPAIAKRDQGVAWAMATPRCG
VGPMGAQKARGEVWESLPRFQRMYGNAQMSRQKCAALVEPSWNTSTRAVQRRYGGLEPPC
SMPTGALPSGAVRRGPPSSRPQNGRPTDSLHHAPGKVTGTQHQPVKAAKGAVPCRATGVE
LPKALGAHPLHWHDLEVRHGVKGDYFGALQLNDFPGGLQTCMGPVAPLFWPISPIKNGSI
YPVPAPSLYLRSN

>gi568815592f:142047288_142318640|GENSCAN_predicted_CDS_5|1662_bp
atgattgtatatttggaaaaccccatcgtctcagccccaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaacgtgcaaaaatcacaagcattcctatac
accaataatagacaaacagagagccaaatcatgagtgggtgcccattcacaattactgca
aagagaataaaatacctaggaatacaacttacaagggatgtgaaggacctcttcaaggag
aactacaaaccagtgctcaacaaaataaaagaggacacaaacaaatggaagagcatttca
tgctcatggataggaagaatcaatatcatgaaaagggccatactgcccaaggtaacttat
acattcaatgctatccccatcaagctaccactgacttccttcacagaattggaaaaaact
actttaaagttcatatggaaccaaaaaagagcacgcatagccaagacaattctaagcaaa
aagaacaaagctggaggcatcacactacctgacttcaaactatactacaagtgtacagta
accaaaacagcatggtgccagtaccaaaacagatatatagaccaatggaacagaacagag
gcctcagaaataacaccacacatctacaaccatctgatctttgacaaacctgacaaaaac
aaacaatggcatttatcactatttaatacagaagttcccatagtgtggtccccagaactt
tctagcaagttcgcaggtgatgctgatgccggtcgtccagagacacctttgagaaccggt
ttgaggagaatctcttttctcagacttgcaatatttctgatttgggtagagctaaaccac
tcgaactttagggaccaccttaagtgtctcttaaaactcagaaggctgggacccatccct
agagtttctgattgggtaggacaggttggagatctagaaggaaaaaatggttccatgagc
cagatacagggccagctgctctgtgtagccttgggacatggcaccccagctgctccagct
ccagccatagctaaaagggaccaaggtgtggcttgggccatggccacaccaaggtgtggt
gttgggcctatgggtgcgcagaaggcaagaggtgaggtttgggaatctctgcctagattt
caaagaatgtatggaaatgcccagatgtctaggcagaagtgtgctgcactggtggagccc
tcatggaacacctctacaagagcagtgcagagaagatatggggggttggagcccccatgc
agcatgcccactggggcactgcctagtggagctgtgagaagagggccaccatcctctaga
cctcagaatggtagacctactgacagcttacatcatgcacctggaaaagtcacaggcact
caacatcagcctgtgaaagcagccaagggggctgtaccctgcagagccacaggggtggag
ctgcccaaggccttgggagcccaccccttgcattggcatgacctggaagtgagacatgga
gtcaaaggagattattttggagctttacaattgaatgactttcctggtgggcttcagact
tgcatggggcctgtagcccctttgttttggccaatttctcccattaagaatgggagcatt
tatccagtgcctgcaccctcactgtatctcagaagtaactaa

>gi568815592f:142047288_142318640|GENSCAN_predicted_peptide_6|91_aa
MVEGERQVLHSSRQERMRAKQKSYKTIRSCDKHAEPHLALPLLSEVTGEAKWMIHHLDNF
LSNWSQRMPFYPSCSDTRGATGRVCGQGKGP

>gi568815592f:142047288_142318640|GENSCAN_predicted_CDS_6|276_bp
atggtggaaggtgaaagacaagtcttgcatagcagcagacaagagagaatgagagccaag
caaaaatcttataaaaccatcagatcttgtgacaagcatgctgagccacatctagcacta
cctctcctcagtgaagtgactggggaagccaaatggatgatccaccacctggacaacttc
ttgagcaactggtctcagagaatgccattttacccatcgtgttccgacactaggggagcc
acgggaagagtttgtggccaaggaaaaggcccatag

>gi568815592f:142047288_142318640|GENSCAN_predicted_peptide_7|285_aa
MIQLPPIRSLPRYVGIMGATIQDEIWVGIQPNPIRGCIFSSSGVIHDFDFSQELQSRKQE
CFLVPINCVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAPNLLKLI
SNFSKVSGYKIDVQKSQAFLYTNNRQTESQIMSELPFTITTNRIKYLGIQLTRDVKELFK
EHYKPLLNEIKEDTNKWKNIPCSWIGRINIMKMAILPKVTYTFNAIPIKLPQTFFTELEK
TTLKFIWNQKRACIAKTILSKKNKVGGIKLPDFKLYYKATVTKTP

>gi568815592f:142047288_142318640|GENSCAN_predicted_CDS_7|858_bp
atgattcaattacctcccatccggtctctcccacgatatgtgggaattatgggagctaca
attcaagatgagatttgggtggggatccagccaaaccctatcagaggttgtatcttcagt
agctctggggtaattcacgactttgatttctctcaggaacttcagagtagaaagcaagaa
tgtttcctcgttcctatcaactgtgtgttggaagtcctggctagggcaatcaggcaagag
aaagaaataaagggtattcaattaggaaaagaggaagtcaaattgtctctgtttgcagat
gacatgattgtatatttagaaaaccccattgtctcagccccaaatctccttaagctgata
agcaatttcagcaaagtctcaggatacaaaatcgatgtgcaaaaatcacaagcattccta
tacaccaataatagacaaacagagagccaaatcatgagtgaactcccattcacaattact
acaaacagaataaaatacctaggaatacaacttacaagggatgtgaaagaactcttcaag
gagcactacaaaccactgctcaatgaaataaaagaggacacaaacaaatggaagaacatt
ccatgctcatggataggaagaatcaatatcatgaaaatggccatactgcccaaggtaact
tatacattcaatgctatccccatcaagctaccacagactttcttcacagaattggaaaaa
actactttaaagttcatatggaaccaaaaaagagcctgcatagccaagacaattctaagc
aaaaagaacaaagttggaggcatcaagctacctgacttcaaactatactacaaggctaca
gtaaccaaaacaccatga

>gi568815592f:142047288_142318640|GENSCAN_predicted_peptide_8|228_aa
GEPRRPSPAPRRDPPLRRFWRVHGLSRRRKVNPGRGSVQRRACGRGSRLAAGPSSQGSWQ
GDSPRTRALRPRFRRDWSWAQVRRPRRRAAYDPTPAALVWALRGWGCPEGAAAPHRIFNP
RAEREKSPRGAGQALLERAAKGEWPGSAMGAEPGSAPQLGGDRADPEVAETPGALNPRDP
RREKGEAGKAGAPVASPQRLQPTRVPARVPPPRSRAVALLHFSATFFT

>gi568815592f:142047288_142318640|GENSCAN_predicted_CDS_8|687_bp
ggggaacccaggcgccccagccctgcgccgcggcgggaccctcctttacgccgtttctgg
agagttcatgggctttcccgacggcgcaaggtgaaccctgggcgcggcagcgttcagcgc
agggcctgcggacgaggaagcaggctggcggcaggtccctcctcgcagggaagttggcag
ggcgactctccccggacccgtgcgctccgcccgcgcttccggcgtgactggagctgggct
caggtgcggcggccccggcggcgtgcggcgtatgacccgactccggctgccctggtctgg
gcgctccgcggctggggctgtcccgaaggcgcagctgccccacacaggatcttcaacccc
agggccgaaagggagaagtcgccccgcggggcgggacaggcgcttttggagcgagcagcg
aagggagagtggccggggtcggcgatgggcgcagagccgggctcagctccccagctggga
ggggacagggcggacccggaggtcgccgaaacgccgggagcgctgaaccccagagaccct
cggcgagagaaaggagaagctgggaaggcaggcgctcctgtggcatctccccagcgtttg
cagcctacccgagtccccgcgcgggtccccccgccacgctcccgggctgttgctttgctt
cacttttctgccactttctttacttaa