GENSCAN 1.0	Date run:  4-Nov-116	Time: 23:03:07

Sequence gi568815592r:89229682_89443757 : 214076 bp : 43.02% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.14 PlyA -    289    284    6                               1.05
 1.13 Term -   4949   4689  261  2  0   78   36   194 0.687   8.73
 1.12 Intr -  20617  20479  139  0  1  107   50    39 0.106   2.47
 1.11 Intr -  28300  28050  251  1  2   76  -17   162 0.141   0.74
 1.10 Intr -  34927  34731  197  2  2   24  100   531 0.948  47.03
 1.09 Intr -  35479  35405   75  2  0   55  100    34 0.631   0.79
 1.08 Intr -  36084  35932  153  1  0   87   33   117 0.983   6.14
 1.07 Intr -  38138  37998  141  0  0   83   30   153 0.997   9.32
 1.06 Intr -  38415  38333   83  2  2   31   87    80 0.853   1.48
 1.05 Intr -  39553  39330  224  1  2   77   55   348 0.858  27.33
 1.04 Intr -  42041  41974   68  0  2  110   68   148 0.956  13.62
 1.03 Intr -  49417  49246  172  1  1   62   77    63 0.773   2.12
 1.02 Intr -  51582  51463  120  0  0   63   80    85 0.886   5.89
 1.01 Init -  52365  52312   54  0  0   88   71    14 0.672   0.98
 1.00 Prom -  52931  52892   40                              -7.96

 2.00 Prom +  53868  53907   40                              -3.66
 2.01 Init +  58692  58835  144  2  0   67   44   107 0.544   4.33
 2.02 Intr +  60983  61192  210  1  0   22   93    85 0.619   1.51
 2.03 Intr +  72147  72274  128  2  2  -15   44   264 0.951  11.18
 2.04 Intr +  72357  72485  129  0  0   68    6   164 0.721   6.01
 2.05 Intr +  72528  72618   91  0  1  -37   33   174 0.662  -0.60
 2.06 Intr +  72959  73270  312  1  0   53   48   553 0.825  44.18
 2.07 Term +  73284  73433  150  2  0  -28   48   358 0.968  18.11
 2.08 PlyA +  73714  73719    6                               1.05

 3.08 PlyA -  77830  77825    6                               1.05
 3.07 Term -  79368  79337   32  1  2  139   41     8 0.262  -0.78
 3.06 Intr - 100221 100102  120  1  0   38   64    80 0.087   1.07
 3.05 Intr - 108862 108778   85  1  1   87   86    58 0.591   4.89
 3.04 Intr - 112774 112643  132  1  0   70  107    36 0.897   4.54
 3.03 Intr - 114075 114002   74  1  2   54   88    41 0.704  -0.17
 3.02 Intr - 122595 122548   48  1  0   95   60    38 0.313   0.35
 3.01 Init - 122888 122858   31  2  1  113   88    65 0.749   8.90
 3.00 Prom - 135742 135703   40                              -4.36

 4.08 PlyA - 138215 138210    6                               1.05
 4.07 Term - 138526 138375  152  2  2  119   43   104 0.977   7.07
 4.06 Intr - 142904 142756  149  1  2   61   88    83 0.998   5.48
 4.05 Intr - 148132 147990  143  1  2   75  106    62 0.998   5.85
 4.04 Intr - 149657 149543  115  1  1   88   89    50 0.984   5.55
 4.03 Intr - 150686 150487  200  2  2   68   94   151 0.987  11.85
 4.02 Intr - 157909 157614  296  2  2   73  103   275 0.989  24.23
 4.01 Init - 182312 182165  148  2  1   93   83   348 0.999  35.05
 4.00 Prom - 207248 207209   40                              -2.16


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 159388 159379   10  1  1   50  105     5 0.854  -0.80
S.002 Term + 176703 176830  128  1  2   84   42   168 0.959  10.24


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:89229682_89443757|GENSCAN_predicted_peptide_1|645_aa
MEGGGWTDELKLSDCPHQSQLLLSTDFKLLEEGTAAYASPYCELQSAQGLVWWTQSGQPM
HRAWRFLGLIIHFLVLVILGTGPYCEPQQTEAPQPLESWLGKPGVGNSGARFLSPGPAIP
VGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDV
FFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELES
YAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLR
RHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLDPEFQSESLQHVIVNLDNIRLG
FEKGITTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQE
RKERKLREKFPCMCGMLHSKTMMLDGSYSESEANSLAGYPRSHILTEEERQDKIVVHLGL
SGEANAARKKGLLKGQTGFRIFQNTHAIDKYSRKHRCSTSARKLAAAASTSPTLSWCLLY
HGIGEAVEWHLATDLSHPPGRAWDLQPAMPEPLQPSVGSCVARASPTSTAPCSTAPSPIN
HPRAEEYGHTVQDWQAAPPAALVQDPLGEASWAPESGGEVENLYV

>gi568815592r:89229682_89443757|GENSCAN_predicted_CDS_1|1938_bp
atggagggaggtggctggacggatgagttgaagctgagtgactgcccccaccagagtcag
ttgctcctctccacggattttaagctcctggaggaaggaactgcggcctatgcatctcca
tattgcgaattgcagtctgctcagggcttggtctggtggacacagtcaggacagcccatg
cacagggcatggcggtttctcgggcttatcatccacttcttggtattggtcattcttggt
actggcccatactgtgagccacagcaaacagaggcccctcaaccactggagagctggctg
gggaagccaggagtaggaaattcaggggcccgcttcctgagtccaggccctgccatcccg
gtgggcgtggacgtacaggtggagagcctggacagcatctccgaggtggacatggacttc
actatgaccctgtacctgcggcattactggaaggatgagaggctagctttctccagcgcc
agcaacaagagcatgaccttcgatggccggctggtgaagaagatctgggtccctgatgtc
ttctttgttcactccaaaagatcgttcactcatgacaccaccactgacaacatcatgctg
agggtgttcccagatggacacgtgctgtacagcatgaggattacggtcactgccatgtgc
aacatggacttcagccactttcccctggactcccagacctgttctttggagctggagagc
tatgcctatacagatgaagatctaatgctgtactggaagaatggggatgaatccctaaaa
acagatgagaagatctccttgtctcagtttctgattcagaaatttcacacaacttccagg
ctggccttctacagcagcactggctggtacaaccgtctgtacattaacttcacgttgcgt
cgccacatcttcttcttcttgctccaaacatatttccctgccactctgatggtcatgctg
tcctgggtgtccttctggatcgaccgcagagctgtgcctgccagagtttcactggaccct
gaattccagagtgaaagtttacaacatgtcattgtaaatttagacaacattaggttgggc
tttgagaaaggtatcacgacggtgctgaccatgaccaccatcatcacgggcgtgaatgcc
tccatgccgcgcgtctcctacgtcaaggccgtggacatctacctctgggtcagctttgtg
ttcgtgttcctctcggtgctggagtatgcggctgtcaactacctgaccaccgtgcaggag
cgcaaggaacggaagctgcgggagaagttcccgtgcatgtgtggaatgcttcattcaaaa
accatgatgctggatggaagctacagtgagtctgaggccaacagcctggctgggtacccc
agaagccatatcctgacagaagaagaaaggcaagacaaaatagtggtccacctgggcctg
agtggtgaagccaacgctgccagaaagaaggggcttctgaagggccagacgggttttcgt
atcttccagaatacccatgccattgacaaatactctagaaagcaccgctgttccacctcc
gctaggaagctggcagctgctgcctccacatctccaactctttcctggtgtctgctctac
catggcattggagaggctgtagagtggcacctagccacagacctttctcatcctcctggc
agggcttgggacctgcagcccgccatgcctgagcctctccagccctccgtgggctcctgt
gtggcccgagcctccccaacgagcaccgccccctgctccacggcgcccagtcccatcaac
cacccaagggctgaggagtatgggcacacggtgcaggactggcaggcagctccacctgca
gccctggtgcaggatccactgggtgaagccagctgggctcctgagtctggtggggaggtg
gagaacctttatgtctag

>gi568815592r:89229682_89443757|GENSCAN_predicted_peptide_2|387_aa
MPGCLRSPSFGVFSPGTRHKHENTFECFHKHENTHQLPPSDYNCMRAPVLALHLLLGSAN
ESASRYQKAGGIGREEEDEGNGFSCIALGPATGCILLLKATAPIGRLFPRATALFQAQIG
AKFWEVISDEHGIDPSGNYVGNSDLELEQISIYYNEASSHKPDNLIFGQSGAGNNWARGH
YTEGAELVDSLLDVRKKCENCDGLSGMGTLLISKMHEEYPNCIMNTFSVVPSPKMFDAKN
MMAARDRHHGCYLAVATVFRGCLSMKEVDEQMLSIQSKNSSYFVEWIPNNMKVDVCDIPP
PSLKMSSTLISNSTGIQELFKHLRAVHGHVPAQGLPTLGMDEMEITEAKSNMNDLVSEYQ
QYQDSMAQEEGEMFADEEEELEAQGPK

>gi568815592r:89229682_89443757|GENSCAN_predicted_CDS_2|1164_bp
atgccaggatgcctgaggagccccagctttggggtcttcagcccaggcaccagacacaag
catgaaaacaccttcgagtgttttcacaagcatgaaaacacccatcagctgccaccatct
gactacaactgcatgagagccccagtccttgccctccacctcctgcttggttctgccaat
gaaagtgccagtcggtatcagaaggcaggaggtatcggaagggaggaggaggatgagggg
aatggcttctcctgcatcgctcttggcccagctacgggctgcatccttcttttgaaggcc
acagctcccatcgggcggctttttccaagagctacagctcttttccaggctcagatcggg
gccaagttctgggaagtcatcagtgatgagcatggcatagaccccagcggcaactacgtg
gggaactcggacttggagctggagcagatcagcatctactacaacgaggcctcttctcat
aagcctgacaatttaatctttggtcagagtggggccggcaataactgggccaggggtcac
tacacggagggtgcggagctggtggattccctcctggatgtgcggaagaagtgtgagaac
tgcgacggtctctcgggtatgggcacgctgctcatcagcaagatgcatgaggagtatccc
aactgcatcatgaacaccttcagcgtagtgccctcgcccaagatgtttgatgccaagaac
atgatggctgcccgcgaccggcaccacggctgctacctggcagtggccaccgtgttccgg
ggctgcctgtccatgaaggaggtggacgagcagatgctgtccatccagagcaagaacagc
agctacttcgtggagtggatccccaacaacatgaaggtggacgtgtgtgacatcccaccc
cccagcctcaagatgtcttccaccctcatcagcaacagcacgggcatccaggagctgttc
aagcatctcagagcagttcacggacatgttccagcacaaggccttcctacactgggcatg
gacgagatggagatcaccgaggccaagagcaacatgaatgacctggtgtccgagtaccag
cagtaccaggactccatggcccaggaggagggtgagatgttcgcagatgaggaggaggaa
ttggaggcccagggccccaagtga

>gi568815592r:89229682_89443757|GENSCAN_predicted_peptide_3|173_aa
METRYNLKSPELGQKLIPENRCKGDVAVKRLMKEAAELKDPTDHYHAQPLEDNLFEWHFT
VRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQP
SWSTKNTSMSPRQRRAQQQSQRRLSTSPDVIQGHQPRDNHTDHGLRRITSHLI

>gi568815592r:89229682_89443757|GENSCAN_predicted_CDS_3|522_bp
atggagacccgctacaacctgaagagtccggagctgggtcagaaactcatccctgagaac
aggtgtaaaggtgatgtcgctgttaaacgtttaatgaaagaagcggcagaattgaaagat
ccaacagatcattaccatgcgcagcctttagaggataacctttttgaatggcacttcacg
gttagagggcccccagactccgattttgatggaggagtttatcacgggcggatagtactg
ccaccagagtatcccatgaaaccaccaagcattattctcctaacggctaatggtcgattt
gaagtgggcaagaaaatctgtttgagcatctcaggccatcatcctgaaacttggcagcct
tcgtggagtactaagaatacctccatgagccctcgacagcgccgggcccagcagcagagt
cagagaaggttgtctacttcaccagatgtaatccagggccaccagccaagagacaaccac
actgatcatggactcagaagaatcaccagtcacctcatctaa

>gi568815592r:89229682_89443757|GENSCAN_predicted_peptide_4|400_aa
MSQVLGKPQPQDEDDAEEEEEEDELVGLADYGDGPDSSDADPDSGTEEGVLDFSDPFSTE
VKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKICREDVSNSSFVNFQIWDFPG
QIDFFDPTFDYEMIFRGTGALIFVIDSQDDYMEALARLHLTVTRAYKVNTDINFEVFIHK
VDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTSIYDHSIFEAFSKVVQKLIPQ
LPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYELCCDMIDVVIDISCIY
GLKEDGAGTPYDKESTAIIKLNNTTVLYLKEVTKFLALVCFVREESFERKGLIDYNFHCF
RKAIHEVFEVRMKVVKSRKVQNRLQKKKRATPNGTPRVLL

>gi568815592r:89229682_89443757|GENSCAN_predicted_CDS_4|1203_bp
atgagccaggtgctggggaagccgcagccgcaggacgaggacgacgcggaggaggaggag
gaggaggatgagctggtggggctagcggactacggagacgggcccgactcctccgacgcc
gatccggacagcggcacagaggagggagttctggacttcagtgaccccttcagcactgaa
gtgaagccgagaatcctgctcatgggcctgaggagaagcggcaagtcgtctattcagaaa
gttgtctttcacaaaatgtctcccaacgaaactctgttcttggagagcactaataagata
tgccgggaagatgtttccaacagctcctttgtcaattttcagatttgggacttcccagga
cagattgacttttttgaccctacatttgactatgagatgatcttccggggaacaggagca
ctgatatttgtcattgactcacaggatgattacatggaagccctggccaggctccacctc
acggtgaccagggcctacaaagtgaatactgacatcaacttcgaggtgtttattcataaa
gtggatggtctgtcagatgaccacaaaattgaaacccaaagagatattcaccagagggca
aacgatgaccttgcagatgctggattagaaaaaattcacctcagcttttatctgacaagc
atatatgatcattcaatatttgaagcttttagcaaagttgttcagaaactgattccacaa
ctcccaactctggagaatttgctgaacatctttatctcaaattctggaattgaaaaggca
tttctatttgatgtggtcagtaaaatttatattgcaactgatagtactccggtggatatg
caaacctatgagctctgctgtgatatgatagatgtggttattgacatctcttgtatttat
ggtctcaaagaagatggagcaggaaccccctatgacaaggaatccacagccatcataaag
cttaataatacaaccgtgctttatttaaaagaggtgacaaagttcctggctctcgtttgc
tttgtcagagaggaaagctttgaaagaaaagggctaattgactataattttcattgcttc
cggaaggccattcatgaagtttttgaggtgagaatgaaagtagtaaaatctcgaaaggtt
cagaatcggctgcagaagaaaaagagagccacccctaatgggacccctagagtgctgctg
tag