GENSCAN 1.0	Date run:  4-Nov-116	Time: 21:19:08

Sequence gi568815587r:120012417_120238031 : 225615 bp : 49.63% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    321    316    6                               1.05
 1.07 Term -    566    550   17  0  2  110   52    -1 0.010  -3.10
 1.06 Intr -   1255   1113  143  0  2   51   72    82 0.014   2.90
 1.05 Intr -   1743   1540  204  2  0   66   17   115 0.007   0.52
 1.04 Intr -   6051   5877  175  1  1   99   68    23 0.160   0.40
 1.03 Intr -  10584  10456  129  1  0   23   84    92 0.597   2.97
 1.02 Intr -  10942  10895   48  2  0   82  119     5 0.643   1.65
 1.01 Init -  13750  13675   76  1  1   76   56   132 0.934   8.12
 1.00 Prom -  21841  21802   40                              -3.46

 2.00 Prom +  40333  40372   40                              -4.06
 2.01 Init +  46207  46338  132  0  0   55   94    61 0.473   3.58
 2.02 Intr +  50558  50645   88  1  1  109   86    41 0.973   5.54
 2.03 Term +  53689  53843  155  2  2   93   52    90 0.897   3.98
 2.04 PlyA +  55848  55853    6                               1.05

 3.03 PlyA -  56317  56312    6                               1.05
 3.02 Term -  74662  74589   74  2  2  126   34    47 0.385   1.17
 3.01 Init -  78547  78496   52  1  1   75  109    21 0.503   4.23
 3.00 Prom -  82381  82342   40                              -1.96

 4.13 PlyA -  82627  82622    6                               1.05
 4.12 Term - 100060  99998   63  1  0  128   49   150 0.999  12.99
 4.11 Intr - 102998 102922   77  0  2  124   95    46 0.998   8.13
 4.10 Intr - 105905 105807   99  0  0   98  105   110 0.999  13.78
 4.09 Intr - 108249 108157   93  1  0  111  100   142 0.978  17.64
 4.08 Intr - 110023 109895  129  2  0   99   59    19 0.621   0.77
 4.07 Intr - 110639 110538  102  0  0  129  116   162 0.998  23.25
 4.06 Intr - 111804 111751   54  1  0   99   85    32 0.828   2.95
 4.05 Intr - 112016 111903  114  0  0    9   93    98 0.861   2.82
 4.04 Intr - 113473 113275  199  1  1   92   90   198 0.999  19.32
 4.03 Intr - 115153 114920  234  1  0   57   92   523 0.916  47.49
 4.02 Intr - 116079 115984   96  0  0  122  105   200 0.996  25.31
 4.01 Init - 125615 124812  804  2  0   64  107  1473 0.996 141.52
 4.00 Prom - 136739 136700   40                              -4.06

 5.02 PlyA - 137418 137413    6                               1.05
 5.01 Sngl - 138660 137776  885  0  0   62   48   161 0.621   5.56
 5.00 Prom - 143440 143401   40                              -5.46

 6.00 Prom + 145889 145928   40                              -5.16
 6.01 Init + 157397 157777  381  1  0   73   72   196 0.241  11.47
 6.02 Intr + 158043 158174  132  2  0   62   77    39 0.350   1.04
 6.03 Term + 163106 163285  180  1  0   91   47    96 0.489   3.41
 6.04 PlyA + 163780 163785    6                               1.05

 7.07 PlyA - 165066 165061    6                               1.05
 7.06 Term - 169454 169291  164  0  2   74   42    83 0.179   0.40
 7.05 Intr - 175230 175106  125  2  2   72   58    55 0.168   1.13
 7.04 Intr - 176757 176708   50  0  2   91   87    43 0.345   1.98
 7.03 Intr - 177586 177402  185  2  2   25   99    56 0.144  -0.09
 7.02 Intr - 180926 180877   50  1  2   69  113    12 0.169   0.12
 7.01 Init - 181200 181124   77  0  2   60   50    93 0.423   3.29
 7.00 Prom - 186136 186097   40                              -4.26

 8.00 Prom + 189676 189715   40                              -5.96
 8.01 Init + 198864 199094  231  2  0   60  100   708 0.999  65.46
 8.02 Intr + 213245 213379  135  1  0  105  111   204 0.993  25.16
 8.03 Intr + 214400 214580  181  1  1   38   82   273 0.993  21.14
 8.04 Term + 216452 216726  275  0  2  158   46   437 0.999  42.13
 8.05 PlyA + 217500 217505    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:120012417_120238031|GENSCAN_predicted_peptide_1|263_aa
MVGCKSRALPRGEAAKARREIERSAGIVSNCLLEVESQMDAVESCFPEVASSLSPIPNVG
LGETVGKGALLENTLKDKEPCFLPGSSNIKWIYLLKQIPYQDKGKSWIQWLPLSQGSTLW
CLSFPFISGILQALLIPSQVAELQVAPGRQIGSKRGHPLLAAPWSPSRVWGPFLSTLETW
GTAGRPDATDGSAAAGTLLVGVCEAHSGCPGLRQQAKQTALSSGCCSPGSIRAPAAAQLG
SRHSPGQEAPAGGLRGGLGPGLQ

>gi568815587r:120012417_120238031|GENSCAN_predicted_CDS_1|792_bp
atggtgggctgcaagtcccgagccctgccccgcggggaggcagctaaggcccggcgagaa
atcgagcgcagcgctggcattgtttcaaattgcctcctggaggtggagtctcagatggat
gccgtagagagctgcttcccagaagttgcatcttccctgtcgcccatcccaaatgtgggc
ttgggagagacagtgggcaagggagctctcctggaaaatacgctgaaggacaaagaacct
tgcttcctgccaggcagcagcaacatcaaatggatctatttgctcaagcaaatcccctat
caagacaaaggcaagtcttggattcagtggttgcctctgtcacaaggaagtaccttgtgg
tgcctcagtttccctttcatatcaggaattcttcaggccttgctcattccctcccaggtg
gcagagctgcaggttgctccaggtaggcagattggctccaagcggggccacccgctgctc
gcagcaccctggagcccatcccgagtgtggggtcccttcctctccactctggaaacctgg
ggcacagctggccgccctgatgccaccgacggctctgctgctgcagggactctgcttgtg
ggggtgtgcgaggcccactccggctgccctggcctccggcaacaggcaaaacagactgct
ctgagcagtggctgctgctccccggggtccatccgagcaccggcagcagcacaacttggc
agccggcacagccccgggcaggaagctcctgcagggggactccgcggaggcctggggcca
ggactccagtga

>gi568815587r:120012417_120238031|GENSCAN_predicted_peptide_2|124_aa
MLQTWGKALTRQNTEVMAQGAGAGPPSEKASRRKTLVAVVDLAQGFCKNQMRNSYGPNAG
GYPLLDTSVMKEGGPSRGIQGSSPPPMPDAVSGAQSTRIGVQRPQLWAQLLSWCYVTLVN
SLDD

>gi568815587r:120012417_120238031|GENSCAN_predicted_CDS_2|375_bp
atgctgcagacctgggggaaagctctgaccagacaaaacacggaggtgatggcccaaggt
gcaggagcaggtcctcccagtgagaaggcttccaggaggaagaccttggtagctgtggta
gaccttgcccagggtttttgtaagaatcaaatgaggaacagttatggcccaaatgctggc
ggttatcctctattagacacaagcgtcatgaaggaagggggaccttccagaggcatccag
ggcagctctccacccccaatgccagatgcagtatcaggtgcacagagcaccagaatagga
gtccagagacctcagctgtgggcccagctcctcagttggtgctatgtgaccttggtcaat
tcactggatgactga

>gi568815587r:120012417_120238031|GENSCAN_predicted_peptide_3|41_aa
MMDQMQYEVLHVCRPVPGSGDLIEDAAEFPSLAYGGAKRFS

>gi568815587r:120012417_120238031|GENSCAN_predicted_CDS_3|126_bp
atgatggatcagatgcaatatgaggtgcttcatgtctgcaggcctgtcccaggctctgga
gaccttatagaggatgctgctgaattccctagcttggcttatggaggagcaaaaagattc
agttga

>gi568815587r:120012417_120238031|GENSCAN_predicted_peptide_4|687_aa
MEAADASRSNGSSPEARDARSPSGPSGSLENGTKADGKDAKTTNGHGGEAAEGKSLGSAL
KPGEGRSALFAGNEWRRPIIQFVESGDDKNSNYFSMDSMEGKRSPYAGLQLGAAKKPPVT
FAEKGELRKSIFSESRKPTVSIMEPGETRRNSYPRADTGLFSRSKSGSEEVLCDSCIGNK
QKAVKSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEARKCPVHGKTMELFCQTDQ
TCICYLCMFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIK
SFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVKVIMDALDERAKVLHED
KQTREQLHSISDSVLFLQEFGALMSNYSLPPPLPTYHVLLEGEGLGQSLGNFKDDLLNVC
MRHVEKMCKADLSRNFIERNHMENVSHALSSEKLRLAVAAEVGLRSVIIIVPGVQTRQGS
PSGHNAGHGLCTGVALRPVRGGDHRYVNNYTNSFGGEWSAPDTMKRYSMYLTPKGPGQSQ
PARCRPSTDQCLPVLALWWPLTFLGASNKPQQYPLHKGGVRTSYQPSSPGRFTKETTQKN
FNNLYGTKGNYTSRVWEYSSSIQNSDNDLPVVQGSSSFSLKGYPSLMRSQSPKAQPQTWK
SGKQTMLSHYRPFYVNKGNGIGSNEAP

>gi568815587r:120012417_120238031|GENSCAN_predicted_CDS_4|2064_bp
atggaagctgcagatgcctccaggagcaacgggtcgagcccagaagccagggatgcccgg
agcccgtcgggccccagtggcagcctggagaatggcaccaaggctgacggcaaggatgcc
aagaccaccaacgggcacggcggggaggcagctgagggcaagagcctgggcagcgccctg
aagccaggggaaggtaggagcgccctgttcgcgggcaatgagtggcggcgacccatcatc
cagtttgtcgagtccggggacgacaagaactccaactacttcagcatggactctatggaa
ggcaagaggtcgccgtacgcagggctccagctgggggctgccaagaagccacccgttacc
tttgccgaaaagggcgagctgcgcaagtccattttctcggagtcccggaagcccacggtg
tccatcatggagcccggggagacccggcggaacagctacccccgggccgacacgggcctt
ttttcacggtccaagtccggctccgaggaggtgctgtgcgactcctgcatcggcaacaag
cagaaggcggtcaagtcctgcctggtgtgccaggcctccttctgcgagctgcatctcaag
ccccacctggagggcgccgccttccgagaccaccagctgctcgagcccatccgggacttt
gaggcccgcaagtgtcccgtgcatggcaagacgatggagctcttctgccagaccgaccag
acctgcatctgctacctttgcatgttccaggagcacaagaatcatagcaccgtgacagtg
gaggaggccaaggccgagaaggagacggagctgtcattgcaaaaggagcagctgcagctc
aagatcattgagattgaggatgaagctgagaagtggcagaaggagaaggaccgcatcaag
agcttcaccaccaatgagaaggccatcctggagcagaacttccgggacctggtgcgggac
ctggagaagcaaaaggaggaagtgagggctgcgctggagcagcgggagcaggatgctgtg
gaccaagtgaaggtgatcatggatgctctggatgagagagccaaggtgctgcatgaggac
aagcagacccgggagcagctgcatagcatcagcgactctgtgttgtttctgcaggaattt
ggtgcattgatgagcaattactctctccccccacccctgcccacctatcatgtcctgctg
gagggggagggcctgggacagtcactaggcaacttcaaggacgacctgctcaatgtatgc
atgcgccacgttgagaagatgtgcaaggcggacctgagccgtaacttcattgagaggaac
cacatggagaacgtctcccatgccctctcatctgagaagctgcggctggcggtggctgca
gaagtggggttgaggagtgtgataatcatcgtccctggggtacaaactcggcagggcagc
ccctccggtcacaatgctggccacggcctctgtacaggtgtggccctgcgtcctgtacga
ggtggtgaccatcgctatgtgaacaactacacgaacagcttcgggggtgagtggagtgca
ccggacaccatgaagagatactccatgtacctgacacccaaaggccctggacagtcccag
cctgcaaggtgccggcctagcacagaccagtgcctgcctgtccttgccctgtggtggcct
ctcacattcttgggcgccagcaacaaaccacagcaatacccgttacataagggtggggtc
cggacatcataccagccctcgtctcctggccgcttcaccaaggagaccacccagaagaat
ttcaacaatctctatggcaccaaaggtaactacacctcccgggtctgggagtactcctcc
agcattcagaactctgacaatgacctgcccgtcgtccaaggcagctcctccttctccctg
aaaggctatccctccctcatgcggagccaaagccccaaggcccagccccagacttggaaa
tctggcaagcagactatgctgtctcactaccggccattctacgtcaacaaaggcaacggg
attgggtccaacgaagccccatga

>gi568815587r:120012417_120238031|GENSCAN_predicted_peptide_5|294_aa
MEEYLPSKWKAQKAGFAILVFDKTDFQPKKVKRDKEGHYIMVKGSMQQEELTILNIYAPN
TGASSFIKQVLGDPQRDLDSHTIIVGDFNTPLSILDRLMRQKINKDIQDLNSALDQVDLI
DIYRTLHPKSTEYTFFSAPHHTYSKIDHIIGSKTLLSKCKRTEIITNSLSDHSAIKLELR
IEKFTQNHTTTWKLNNLPLNDYWVNNEIKAEINKFFETNENRDTMYQNLWDTAKAVFRGK
FIALNAHRRKQERSKINTLTSQLKELKKQEQTNSKASRRQEITKIRAELKETET

>gi568815587r:120012417_120238031|GENSCAN_predicted_CDS_5|885_bp
atggaggaatatttaccaagcaaatggaaagcacaaaaagcagggtttgcaatcctagtc
tttgataaaacagactttcagccaaaaaaggtcaaaagagacaaagaagggcattacata
atggtaaagggatcaatgcaacaagaagagctgactatcctaaatatatatgcacccaat
acaggagcatccagcttcataaagcaagttcttggagacccacaaagagacttagactcc
cacacaataatagtgggagactttaacaccccactgtcaatattagacagattaatgaga
cagaaaattaacaaggatattcaggacttgaactcagctctggaccaagtggacctaata
gatatctacagaactcttcaccccaaatcaacagaatatacattcttctcagcaccacat
cacacttattctaaaattgaccacataattggaagtaaaacactcctcagcaaatgcaaa
agaacagaaatcataacaaacagtctctcagaccacagtgcaattaaattagaactcagg
attgagaaattcactcaaaaccacacaactacatggaaattgaacaacctgcccctgaat
gactactgggtaaataatgaaattaaggcagaaataaataagttctttgaaacaaatgag
aacagagacacaatgtaccagaatctctgggacacagctaaagcagtgtttagagggaaa
tttatagcactaaatgcccacagaagaaagcaagaaagatctaaaatcaacactttaaca
tcgcaattgaaagaactaaagaagcaagagcaaacaaattcaaaagctagcagaaggcaa
gaaataactaagatcagagcagaactgaaggagacagagacatga

>gi568815587r:120012417_120238031|GENSCAN_predicted_peptide_6|230_aa
MDLESTGVPCPGSCSLWKAAGAGMPNGLNELLGDSLSLVNAEPTLTVRPNPTANNRAALG
GSGLPVPGTGSGRGGCRCGSSARSAKLLCLGGRGHWATCSRGCPQAGLPGFLTARLAGND
AALWHSEPAPTAHRNLQPPSLPQLSLCGPHYPTFCRAQLPYPLYRLSGAMVKMWKLKGPK
MGEEGTELKGRAGEQVQTEAKEPSLAYLLLWKQFRGKELGILEPPECQLG

>gi568815587r:120012417_120238031|GENSCAN_predicted_CDS_6|693_bp
atggatctggaatccacgggggtcccctgcccaggatcgtgcagcctgtggaaggcagca
ggcgccgggatgccgaatggattgaatgagcttctcggggattccctgagcttggtgaac
gcagagcccaccctgacggtcaggcctaaccccaccgccaataacagagcagccctaggt
ggaagtgggctgcctgtgcctggcactgggagcggcagaggcggctgccgctgtggaagt
agcgcccgcagtgccaagctcctgtgcctgggaggacgcgggcactgggcgacctgcagt
cggggctgcccccaggcagggctccctggctttctcacagcgcggctcgcgggaaacgac
gctgccctatggcacagtgaacctgccccaactgctcatcggaacctgcagcccccttcc
ctgccccaactgtccctctgcggaccccattaccctactttctgtcgagcccaactgccc
tatcctttatacaggctgtcgggggcaatggtgaagatgtggaagctgaaaggacccaag
atgggggaagagggtacagaactcaagggaagggctggggagcaggttcagacagaggca
aaagaacccagccttgcttacctgctcctctggaaacagtttcgtggcaaagaattagga
attctggagccgcccgaatgccagctgggatga

>gi568815587r:120012417_120238031|GENSCAN_predicted_peptide_7|216_aa
MWQPLLAKEAEVPLVEEDLGIGQQQPGGLAPACLWGRSGGSQVKEILQHKWLAQGPLACM
HHCPAHKPHGSPLANVESTFLNLYSRPAIIFFLPDWPSGPVPWQGVEWLAAQSMVILAAG
LSPLTVVPLFRSPSLKPHPHSLSYYQEQTPKYFCVSSGKILGASCLYRLPVQHRRLSAQW
LQMVPLYCVGKDQDFFVHSPGPGSEWALAVNYMSEC

>gi568815587r:120012417_120238031|GENSCAN_predicted_CDS_7|651_bp
atgtggcaacctttgctggccaaggaggcagaggtgcctctggtggaagaagaccttggg
atcggccagcagcagcccggaggactggcccctgcctgcctctggggccgctctggtggt
agtcaagtcaaggagattctgcagcataaatggctggcccagggaccactggcctgtatg
catcactgccctgctcataaacctcatggctccccactggcaaatgttgagtccaccttc
ctcaacctgtattcaaggcctgccatcatcttcttcctgccagactggccttcaggtcct
gtgccttggcagggtgtggagtggcttgcagcacagtccatggtcatccttgctgctggg
ctctcccctctgactgtggtccctctgtttcgaagccctagcctcaagcctcatccccac
tctctttcctactaccaagagcagacaccaaaatatttctgcgtttcctctggaaaaatc
ctgggagcatcctgcctgtaccgactcccagttcagcacaggcgactttcagcccagtgg
ctgcagatggttcctctctattgtgtgggcaaggaccaggacttctttgtccatagccca
ggacctggctcagagtgggctctggctgttaattacatgtccgaatgctga

>gi568815587r:120012417_120238031|GENSCAN_predicted_peptide_8|273_aa
MRLPGVPLARPALLLLLPLLAPLLGTGAPAELRVRVRLPDGQVTEESLQADSDADSISLE
LRKPDGTLVSFTADFKKDVKVFRALILGELEKGQSQFQALCFVTQLQHNEIIPSEAMAKL
RQKNPRAVRQAEEVRGLEHLHMDVAVNFSQGALLSPHLHNVCAEAVDAIYTRQEDVRFWL
EQGVDSSVFEALPKASEQAELPRCRQVGDHGKPCVCRYGLSLAWYPCMLKYCHSRDRPTP
YKCGIRSCQKSYSFDFYVPQRQLCLWDEDPYPG

>gi568815587r:120012417_120238031|GENSCAN_predicted_CDS_8|822_bp
atgcgccttcccggggtacccctggcgcgccctgcgctgctgctgctgctgccgctgctc
gcgccgctgctgggaacgggtgcgccggccgagctgcgggtccgcgtgcggctgccggac
ggccaggtgaccgaggagagcctgcaggcggacagcgacgcggacagcatcagcctcgag
ctgcgcaagcccgacggcaccctcgtctccttcaccgccgacttcaagaaggatgtgaag
gtcttccgggccctgatcctgggggagctggagaaggggcagagtcagttccaggccctc
tgctttgtcacccagctgcagcacaatgagatcatccccagtgaggccatggccaagctc
cggcagaaaaatccccgggcagtgcggcaggcggaggaggttcggggtctggagcatctg
cacatggatgtcgctgtcaacttcagccagggggccctgctgagcccccatctccacaac
gtgtgtgccgaggccgtggatgccatctacacccgccaggaggatgtccggttctggctg
gagcaaggtgtggacagttctgtgttcgaggctctgcccaaggcctcagagcaggcggag
ctgcctcgctgcaggcaggtgggggaccacgggaagccctgcgtctgccgctatggcctg
agcctggcctggtacccctgcatgctcaagtactgccacagccgcgaccggcccacgccc
tacaagtgtggcatccgcagctgccagaagagctacagcttcgacttctacgtgccccag
aggcagctgtgtctctgggatgaggatccctacccaggctag