GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:08:14

Sequence gi568815596f:161079663_161335515 : 255853 bp : 37.11% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   7756   7795   40                              -1.75
 1.01 Init +  10292  10344   53  1  2   60   94     6 0.170  -0.92
 1.02 Intr +  10841  10944  104  2  2  113  109    13 0.293   4.80
 1.03 Term +  34469  34614  146  0  2   97   51   126 0.949   6.89
 1.04 PlyA +  36553  36558    6                               1.05

 2.03 PlyA -  36658  36653    6                               1.05
 2.02 Term -  46138  46047   92  2  2   13   55   144 0.032   0.50
 2.01 Init -  64090  63982  109  1  1   48   81   101 0.652   5.83
 2.00 Prom -  65343  65304   40                              -6.15

 3.00 Prom +  68479  68518   40                              -3.85
 3.01 Init +  81656  81750   95  1  2   72   54   119 0.038   6.80
 3.02 Intr +  99952 100099  148  1  1   84   93   176 0.609  17.02
 3.03 Intr + 123825 123933  109  2  1   31   95   140 0.102   7.94
 3.04 Intr + 125013 125131  119  1  2   86   69    70 0.364   4.16
 3.05 Intr + 140062 140117   56  0  2   89   95   -21 0.054  -4.44
 3.06 Intr + 144969 145084  116  0  2   82   99    50 0.542   4.67
 3.07 Intr + 151309 151889  581  2  2  128   93   363 0.975  32.29
 3.08 Term + 155680 155856  177  0  0   90   47   146 0.979   7.40
 3.09 PlyA + 156319 156324    6                               1.05

 4.07 PlyA - 156668 156663    6                               1.05
 4.06 Term - 157927 157808  120  1  0   73   43   100 0.339   1.49
 4.05 Intr - 159587 159435  153  2  0   77  -12   170 0.464   5.25
 4.04 Intr - 175018 174923   96  1  0  100   75    52 0.420   4.39
 4.03 Intr - 201330 201169  162  0  0  -25   34   209 0.194   3.45
 4.02 Intr - 201646 201552   95  2  2   14   59   151 0.754   3.56
 4.01 Init - 202214 202076  139  2  1   69  105   223 0.993  22.45
 4.00 Prom - 202346 202307   40                             -16.85

 5.00 Prom + 202521 202560   40                             -14.71
 5.01 Init + 202667 203038  372  1  0  104   33   293 0.843  22.41
 5.02 Intr + 207351 207513  163  2  1   78   71    58 0.483   1.73
 5.03 Intr + 208626 210083 1458  1  0   -1   72   481 0.015  26.33
 5.04 Term + 210439 211061  623  2  2   11   49   319 0.454  13.89
 5.05 PlyA + 211436 211441    6                               1.05

 6.00 Prom + 212192 212231   40                              -3.65
 6.01 Init + 212369 212496  128  1  2   83   60    46 0.105   0.98
 6.02 Intr + 224840 224870   31  2  1   73   70    38 0.072  -2.29
 6.03 Term + 228535 228753  219  0  0   64   40   160 0.109   4.86
 6.04 PlyA + 229691 229696    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  19214  18918  297  2  0   62   49   167 0.826   5.69
S.002 Init +  33064  33139   76  0  1   68   81    32 0.860   1.80
S.003 Intr -  87820  87720  101  1  2  102  110    59 0.825   7.49
S.004 Term + 109274 109384  111  1  0   99   32    97 0.880   2.78


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:161079663_161335515|GENSCAN_predicted_peptide_1|100_aa
MPYAPLRKNMLITKEEMSWCVNIDKALRKEKKIKKKLYSFFTQQHIARKCWLERSTCQAT
EELRLPSDSTACGCEPTLHISPYCQKLYQQSSELETAVTE

>gi568815596f:161079663_161335515|GENSCAN_predicted_CDS_1|303_bp
atgccatatgctcctctaagaaaaaatatgctaattaccaaggaagaaatgagctggtgt
gtgaatatagataaagctttaaggaaagagaaaaaaataaaaaagaaactatacagcttt
ttcacccaacaacacattgccaggaaatgctggctcgaaaggagcacgtgccaagcgacc
gaagagttgaggctaccttctgactctacagcttgtggttgtgaaccaacattacacatc
tccccatactgtcagaaactgtatcagcagtcctcagagctggaaacagcagtcacagaa
tga

>gi568815596f:161079663_161335515|GENSCAN_predicted_peptide_2|66_aa
MNISAKILNKVLANRIQKHIKKLIHQDQVSFIPGTQVHVGQGWEADFRDTCEIHREAVNR
NATATR

>gi568815596f:161079663_161335515|GENSCAN_predicted_CDS_2|201_bp
atgaacatcagtgcaaaaatcctcaataaagtactggcaaaccgaatccaaaagcacatc
aaaaagcttatccaccaagatcaagtcagcttcatccctgggacgcaagtgcacgtgggc
caaggctgggaagctgactttcgggacacctgtgagattcatcgggaagctgtcaatagg
aatgccactgcaactcgatga

>gi568815596f:161079663_161335515|GENSCAN_predicted_peptide_3|466_aa
MVVKEVKKRREIEGKENDLPSYRGWNTHPNERPVIYSILYSDATGRRGMDKNIGEQLNKA
YEAFRQACMDRDSAVKELQQKTENYEQRIREQQEQLSLQQTIIDKLKSQLLLVNSTQDNN
YGCVPLLEDSETRKNNLTLDQPQDKVISGIAREKLPKLYPVLDFTITSFVSVYVDWGNIE
KTFWDLKEEFHKICMLAKAQKDHLSKLNIPDTATETQCSVPIQCTDKTDKQEALFKPQAK
DDINRGAPSITSVTPRGLCRDEEDTSFESLSKFNVKFPPMDNDSTFLHSTPERPGILSPA
TSEAVCQEKFNMEFRDNPGNFVKTEETLFEIQGIDPIASAIQNLKTTDKTKPSNLVNTCI
RTTLDRAACLPPGDHNALYVNSFPLLDPSDAPFPSLDSPGKAIRGPQQPIWKPFPNQDSD
SVVLSGTDSELHIPRVCEFCQAVFPPSITSRGDFLRHLNSHFNGET

>gi568815596f:161079663_161335515|GENSCAN_predicted_CDS_3|1401_bp
atggtagtaaaggaagtgaagaagcgacgtgaaattgaaggaaaagaaaatgacctgcct
tcttaccgcggttggaatacacacccaaacgagagacctgtcatttactccatcctttat
agtgatgctacaggacgaagaggaatggataaaaacattggcgagcaactcaataaagcg
tatgaagccttccggcaggcatgcatggatagagattctgcagtaaaagaattacagcaa
aagactgagaactatgagcagagaatacgtgaacaacaggaacagctgtcacttcaacag
actattattgacaagctaaaatctcagttacttcttgtgaattccactcaagataacaat
tatggctgtgttcctctgcttgaagacagtgaaacaagaaagaataatttgactcttgat
cagccacaagataaagtgatttcaggaatagcaagagaaaaactaccaaagctgtatcca
gtgcttgacttcactataacatcttttgtctcagtatatgtagactggggtaatatagag
aagactttctgggatctgaaagaagaatttcataaaatatgcatgctagcaaaagcacag
aaagaccacttaagcaaacttaatataccagacactgcaactgaaacacagtgctctgtg
cctatacagtgtacggataaaacagataaacaagaagcgctgtttaagcctcaggctaaa
gatgatataaatagaggtgcaccatccatcacatctgtcacaccaagaggactgtgcaga
gatgaggaagacacctcttttgaatcactttctaaattcaatgtcaagtttccacctatg
gacaatgactcaactttcttacatagcactccagagagacccggcatccttagtcctgcc
acgtctgaggcagtgtgccaagagaaatttaatatggagttcagagacaacccagggaac
tttgttaaaacagaagaaactttatttgaaattcagggaattgaccccatagcttcagct
atacaaaaccttaaaacaactgacaaaacaaagccctcaaatctcgtaaacacttgtatc
aggacaactctggatagagctgcgtgtttgccacctggagaccataatgcattatatgta
aatagcttcccacttctggacccatctgatgcaccttttccctcactcgattccccggga
aaagcaatccgaggaccacagcagcccatttggaagccctttcctaatcaagacagtgac
tcggtggtactaagtggcacagactcagaactgcatatacctcgagtatgtgaattctgt
caagcagttttcccaccatccattacatccaggggggatttccttcggcatcttaattca
cacttcaatggagagacttaa

>gi568815596f:161079663_161335515|GENSCAN_predicted_peptide_4|254_aa
MWYIIDERGDSEESSEEDTGEPNGFIDCPSRRGQGNGSLWDTGDDRVARRCELQVHAESA
KRSGRCSALRRSEYRPARWFCGSHVVVLTPAASLQPSNPGDPQICVVTSPPPDPDAWQFK
NYPCKRKDFEEELLATTILLDASMNLTTLGTSDEWNYAVFVLLCPFLNSPGLPVALAGRR
GRFTRQRVGVRTQALRPLPQYVDPGARVLAPPPRGLFYLGAVLTRPRLADAKSQTLHDSV
MRQRERPGGCPLHL

>gi568815596f:161079663_161335515|GENSCAN_predicted_CDS_4|765_bp
atgtggtatattattgatgaacgtggtgactctgaagaatcctcagaggaggacacggga
gagcccaatggcttcattgattgcccatcacggagaggacagggaaatgggagcttgtgg
gatactggtgatgacagagtcgcaagacgctgtgagctccaagtccacgcagagtccgcc
aaacgctccggccgctgctccgctctgcgaagatctgagtacaggcctgccaggtggttc
tgtggttcccacgttgtggttttgacaccagcagcatccttgcaaccctcaaaccccgga
gatccacagatctgtgttgtaacaagccctccccctgaccctgatgcatggcagtttaag
aattacccgtgtaagcgaaaagactttgaagaagagctcctggcaaccaccattctactt
gatgcctctatgaatctgactactctaggtacctcagatgagtggaattatgcagtattt
gtccttttgtgtccctttctgaattcgcctggactcccagtcgcgctcgctggccgacgc
ggtcgattcaccagacagcgagtgggcgtgagaacgcaggctcttcggccgcttccccag
tacgtggatcccggagcgcgggtcctcgccccaccgccccggggacttttttacctggga
gctgttcttacccggccacgcttagcagatgccaaaagccagaccctgcacgactcagtc
atgagacagagggagagacctggcgggtgcccactccacctttag

>gi568815596f:161079663_161335515|GENSCAN_predicted_peptide_5|871_aa
MMQLPGHFSTFLVRAPHPAAEKPLLHSILTHRPVHPLATVTLLPAEEAPVMADITAQSIL
TPQLCSGTLLLAHVAARAHAGTTLQHVGVPAGHTTGDMASMTLLPGSDTADVNPISTKNT
KISWPLLVIPRQTGSGVDLQQTPTGLQLRVLTVRRKTNKQKEHPHQNPICTLPSSKTKGS
NSRITILTLNVNGPNAPIKRHRLANRIKTQDPSVCCIQETHLTGRDTHRLKIKGWRKIYQ
ANGKQNKTKQQKKQGLQILVSDKRDFKPTKIKRDKEGHYIMVKGPIQQEEQTILNIHAPN
TGEPRFIKKVLRDLQRDLDSHTIIMGDFNMPLSTLDRSTRHKVNKDIQELNSALHQVDLI
DIYRTLHPKSTAYTFFSAPHCTYSKIDHRVGSKALLSKCKRTEIITNCLSDHSAIKLELR
IKKLTQNRSTTWKLNNLLLNNYWVHKEMKAEIKMFFEINEDKDKTYQNLWDTFKAVCRGK
FIALNAHKRRQERSKIDTLTLQLKELEKQEQTHSKASRRQEITKIRAELKETETQKTLQK
PNESRSWFFEKINKIDRPLARLIKKKREKNQIDAIKNDKGDITTDPTEIQTTIRDYYKHL
YTNKLENLEEMDKFLDTYTLPRLNQEEVEPLNRLIIGSEIEAIINSLPTKKVQDQTDSQP
NFTRDAEKAFDKIQQPFRLKPLNKLSIDGTYLKIIRAIYDKSTANIILNGQKLQAFPLKT
GTRQGCPLSPLLFNIALEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMTVYLENPIVSA
QNLLKLISNFSKVSGYKINVQKSQALLYTNNRQTESQIMSELPFTTASKRIKYLGIQLTR
DVKDLFKENYKPLLNDIKEDTNKWKNIHAHG

>gi568815596f:161079663_161335515|GENSCAN_predicted_CDS_5|2616_bp
atgatgcagctacctggccatttctccacatttctggtgagggccccacacccagccgca
gaaaagcccctcctgcattccatcctcacacacaggcctgtccatccacttgctactgtc
acactcttgccagcagaagaggcccctgtaatggccgatatcaccgcccagtctatcctc
accccacagctatgcagcgggaccctcctgctggcccacgtggctgccagagcccatgct
ggcactacactccagcatgtcggcgtccctgcgggccacactaccggtgacatggctagc
atgaccctccttcctggcagtgacactgctgatgtgaaccccatctctactaaaaataca
aaaattagctggcctctgctggtgatacccaggcaaacagggtctggagtggacctccag
caaactccaacaggcttgcagctgagggtcctgactgttagaaggaaaactaacaaacag
aaagaacatccacaccaaaaccccatctgtacattaccatcatcaaagaccaaaggatca
aattcacgtataacaatattaaccttaaatgtaaatggaccaaatgctccaattaaaaga
cacagactggcaaatcggataaagactcaagacccatcagtgtgctgcattcaggaaacc
catctcacgggcagagacacacataggctcaaaataaagggatggaggaagatctaccaa
gcaaatggaaaacaaaacaaaacaaaacaacaaaaaaagcaggggttgcaaatcctagtc
tctgataaaagagactttaaaccaacaaagatcaaaagagacaaagaaggccattacata
atggtaaagggaccaattcaacaagaagagcaaactatcctaaatatacatgcacccaat
acaggagaacccagattcataaagaaagtccttagagacctacaaagagacttagactcc
cacacaataataatgggagactttaacatgccactgtcaacattagacagatcaacgaga
cataaagttaacaaggatatccaggaattgaactcagctctgcaccaagtggacctaata
gacatctacagaactctccaccccaaatcaacagcatatacattcttctcagcaccacat
tgcacttattccaaaattgaccacagagttggaagtaaagctctcctcagcaaatgtaaa
agaacagaaattataacgaactgtctctcagaccacagtgcaatcaaactagaactcagg
attaagaaactcactcaaaaccgctcaactacatggaaactgaacaacctgcttctgaat
aactactgggtacataaagaaatgaaggcagaaataaagatgttctttgaaatcaatgag
gacaaggacaaaacataccagaatctctgggacacatttaaagcagtgtgtagagggaaa
tttatagcactaaatgcccacaagagaaggcaggaaagatctaaaattgacaccctaaca
ttacagttaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaa
gaaattactaagatcagagcagaactgaaggagacagagacacaaaaaacccttcaaaaa
cccaatgaatccaggagctggttttttgaaaagatcaacaaaattgatagaccgctagca
agactaataaagaagaaaagagagaagaatcaaatagacgcaataaaaaatgataaaggg
gatatcaccactgatcccacagaaatacaaactaccatcagagactactataaacacctc
tacacaaataaactagaaaatctagaagaaatggataaattcctggacacatacaccctc
ccaagattaaaccaggaagaagttgaacccctgaatagactaataataggctctgaaatt
gaggcaataattaatagcctaccaaccaaaaaagtccaggaccagacggattcacagccg
aattttaccagagatgcagaaaaggcctttgacaaaattcaacagcccttcaggctaaaa
cctctcaataaactaagtattgatgggacgtatctcaaaataataagagctatttatgac
aaatccacagccaatatcatactgaatgggcaaaaactgcaagcattccctctgaaaact
ggcacaagacagggatgccctctctcaccactcctattcaacatagcgttggaagttctg
gccagggcaatcaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtc
aaattgtccctgtttgcagatgacatgactgtatatttagaaaaccccatcgtctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaaatcacaagcattgctctacaccaataacagacaaacagagagccaaatcatgagt
gaactcccattcacaactgcttcaaagagaataaaatacctaggaatccaacttacaagg
gatgtcaaggacctcttcaaagagaactacaaaccactgctcaatgatataaaagaggac
acaaacaaatggaagaacattcatgctcacggatag

>gi568815596f:161079663_161335515|GENSCAN_predicted_peptide_6|125_aa
MDEGGSHHSEQTFARTENQTQHFLTHRWELNNENTWTQGPVVGKILWIVDIDKISAAAAE
RRGRERKRRRRRGASDQGAKCRLTVLPETGDAGPPAPSVPRAPPGHPLDSPSSPIGRRGT
EAEAN

>gi568815596f:161079663_161335515|GENSCAN_predicted_CDS_6|378_bp
atggatgaaggtggaagccatcattctgagcaaacttttgcaaggacagaaaaccaaaca
cagcattttctcactcataggtgggaactgaacaatgagaacacttggacacaggggcct
gttgtggggaaaatcctttggattgttgacatcgacaagatctcagcggcggccgcagag
cgcagaggtagggagagaaaaaggaggcgtcggcggggcgcgagcgaccagggcgctaag
tgccgcctcacagtcctgccagagacaggagacgccgggccgcccgcgccgtctgtccca
agagctcctcctggacatccgcttgactctccgtcgtctccaattggccgtcggggaacg
gaagccgaagcaaactag