Result of FASTA (ccds) for
pF1KB8643
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8643, 517 aa
1>>>pF1KB8643 517 - 517 aa - 517 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.9233+/-0.000867; mu= 7.4267+/- 0.053
mean_var=146.0100+/-29.540, 0's: 0 Z-trim(111.6): 30 B-trim: 178 in 1/53
Lambda= 0.106141
statistics sampled from 12460 (12485) to 12460 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.384), width: 16
Scan time: 3.220
The best scores are: opt bits E(32554)
CCDS14078.1 TBC1D22A gene_id:25771|Hs108|chr22 ( 517) 3497 547.0 1.9e-155
CCDS74877.1 TBC1D22A gene_id:25771|Hs108|chr22 ( 487) 3218 504.3 1.3e-142
CCDS63512.1 TBC1D22A gene_id:25771|Hs108|chr22 ( 470) 3170 496.9 2e-140
CCDS63511.1 TBC1D22A gene_id:25771|Hs108|chr22 ( 439) 2100 333.1 4.1e-91
CCDS4832.1 TBC1D22B gene_id:55633|Hs108|chr6 ( 505) 1805 287.9 1.8e-77
>>CCDS14078.1 TBC1D22A gene_id:25771|Hs108|chr22 (517 aa)
initn: 3497 init1: 3497 opt: 3497 Z-score: 2904.4 bits: 547.0 E(32554): 1.9e-155
Smith-Waterman score: 3497; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KB8 MASDGARKQFWKRSNSKLPGSIQHVYGAQHPPFDPLLHGTLLRSTAKMPTTPVKAKRVST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MASDGARKQFWKRSNSKLPGSIQHVYGAQHPPFDPLLHGTLLRSTAKMPTTPVKAKRVST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 FQEFESNTSDAWDAGEDDDELLAMAAESLNSEVVMETANRVLRNHSQRQGRPTLQEGPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FQEFESNTSDAWDAGEDDDELLAMAAESLNSEVVMETANRVLRNHSQRQGRPTLQEGPGL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QQKPRPEAEPPSPPSGDLRLVKSVSESHTSCPAESASDAAPLQRSQSLPHSATVTLGGTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QQKPRPEAEPPSPPSGDLRLVKSVSESHTSCPAESASDAAPLQRSQSLPHSATVTLGGTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 DPSTLSSSALSEREASRLDKFKQLLAGPNTDLEELRRLSWSGIPKPVRPMTWKLLSGYLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DPSTLSSSALSEREASRLDKFKQLLAGPNTDLEELRRLSWSGIPKPVRPMTWKLLSGYLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 ANVDRRPATLQRKQKEYFAFIEHYYDSRNDEVHQDTYRQIHIDIPRMSPEALILQPKVTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ANVDRRPATLQRKQKEYFAFIEHYYDSRNDEVHQDTYRQIHIDIPRMSPEALILQPKVTE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 IFERILFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IFERILFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 ADTYWCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ADTYWCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 WMNNLLMREVPLRCTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 WMNNLLMREVPLRCTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLF
430 440 450 460 470 480
490 500 510
pF1KB8 LQNLPTAHWDDEDISLLLAEAYRLKFAFADAPNHYKK
:::::::::::::::::::::::::::::::::::::
CCDS14 LQNLPTAHWDDEDISLLLAEAYRLKFAFADAPNHYKK
490 500 510
>>CCDS74877.1 TBC1D22A gene_id:25771|Hs108|chr22 (487 aa)
initn: 3218 init1: 3218 opt: 3218 Z-score: 2673.9 bits: 504.3 E(32554): 1.3e-142
Smith-Waterman score: 3218; 99.8% identity (100.0% similar) in 479 aa overlap (39-517:9-487)
10 20 30 40 50 60
pF1KB8 QFWKRSNSKLPGSIQHVYGAQHPPFDPLLHGTLLRSTAKMPTTPVKAKRVSTFQEFESNT
:.::::::::::::::::::::::::::::
CCDS74 MWEPQPDVGSLLRSTAKMPTTPVKAKRVSTFQEFESNT
10 20 30
70 80 90 100 110 120
pF1KB8 SDAWDAGEDDDELLAMAAESLNSEVVMETANRVLRNHSQRQGRPTLQEGPGLQQKPRPEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SDAWDAGEDDDELLAMAAESLNSEVVMETANRVLRNHSQRQGRPTLQEGPGLQQKPRPEA
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 EPPSPPSGDLRLVKSVSESHTSCPAESASDAAPLQRSQSLPHSATVTLGGTSDPSTLSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 EPPSPPSGDLRLVKSVSESHTSCPAESASDAAPLQRSQSLPHSATVTLGGTSDPSTLSSS
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 ALSEREASRLDKFKQLLAGPNTDLEELRRLSWSGIPKPVRPMTWKLLSGYLPANVDRRPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 ALSEREASRLDKFKQLLAGPNTDLEELRRLSWSGIPKPVRPMTWKLLSGYLPANVDRRPA
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 TLQRKQKEYFAFIEHYYDSRNDEVHQDTYRQIHIDIPRMSPEALILQPKVTEIFERILFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 TLQRKQKEYFAFIEHYYDSRNDEVHQDTYRQIHIDIPRMSPEALILQPKVTEIFERILFI
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB8 WAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIEADTYWCMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 WAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIEADTYWCMS
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB8 KLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNLLMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNLLMR
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB8 EVPLRCTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLFLQNLPTAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 EVPLRCTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLFLQNLPTAH
400 410 420 430 440 450
490 500 510
pF1KB8 WDDEDISLLLAEAYRLKFAFADAPNHYKK
:::::::::::::::::::::::::::::
CCDS74 WDDEDISLLLAEAYRLKFAFADAPNHYKK
460 470 480
>>CCDS63512.1 TBC1D22A gene_id:25771|Hs108|chr22 (470 aa)
initn: 3170 init1: 3170 opt: 3170 Z-score: 2634.4 bits: 496.9 E(32554): 2e-140
Smith-Waterman score: 3170; 100.0% identity (100.0% similar) in 470 aa overlap (48-517:1-470)
20 30 40 50 60 70
pF1KB8 LPGSIQHVYGAQHPPFDPLLHGTLLRSTAKMPTTPVKAKRVSTFQEFESNTSDAWDAGED
::::::::::::::::::::::::::::::
CCDS63 MPTTPVKAKRVSTFQEFESNTSDAWDAGED
10 20 30
80 90 100 110 120 130
pF1KB8 DDELLAMAAESLNSEVVMETANRVLRNHSQRQGRPTLQEGPGLQQKPRPEAEPPSPPSGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 DDELLAMAAESLNSEVVMETANRVLRNHSQRQGRPTLQEGPGLQQKPRPEAEPPSPPSGD
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB8 LRLVKSVSESHTSCPAESASDAAPLQRSQSLPHSATVTLGGTSDPSTLSSSALSEREASR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LRLVKSVSESHTSCPAESASDAAPLQRSQSLPHSATVTLGGTSDPSTLSSSALSEREASR
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB8 LDKFKQLLAGPNTDLEELRRLSWSGIPKPVRPMTWKLLSGYLPANVDRRPATLQRKQKEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LDKFKQLLAGPNTDLEELRRLSWSGIPKPVRPMTWKLLSGYLPANVDRRPATLQRKQKEY
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB8 FAFIEHYYDSRNDEVHQDTYRQIHIDIPRMSPEALILQPKVTEIFERILFIWAIRHPASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 FAFIEHYYDSRNDEVHQDTYRQIHIDIPRMSPEALILQPKVTEIFERILFIWAIRHPASG
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB8 YVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIEADTYWCMSKLLDGIQDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 YVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIEADTYWCMSKLLDGIQDN
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB8 YTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNLLMREVPLRCTIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 YTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNLLMREVPLRCTIR
340 350 360 370 380 390
440 450 460 470 480 490
pF1KB8 LWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLFLQNLPTAHWDDEDISLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLFLQNLPTAHWDDEDISLL
400 410 420 430 440 450
500 510
pF1KB8 LAEAYRLKFAFADAPNHYKK
::::::::::::::::::::
CCDS63 LAEAYRLKFAFADAPNHYKK
460 470
>>CCDS63511.1 TBC1D22A gene_id:25771|Hs108|chr22 (439 aa)
initn: 2256 init1: 2100 opt: 2100 Z-score: 1749.3 bits: 333.1 E(32554): 4.1e-91
Smith-Waterman score: 2814; 84.9% identity (84.9% similar) in 517 aa overlap (1-517:1-439)
10 20 30 40 50 60
pF1KB8 MASDGARKQFWKRSNSKLPGSIQHVYGAQHPPFDPLLHGTLLRSTAKMPTTPVKAKRVST
::::::::::::::::::::: ::::::::::::::::::::
CCDS63 MASDGARKQFWKRSNSKLPGS-------------------LLRSTAKMPTTPVKAKRVST
10 20 30 40
70 80 90 100 110 120
pF1KB8 FQEFESNTSDAWDAGEDDDELLAMAAESLNSEVVMETANRVLRNHSQRQGRPTLQEGPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 FQEFESNTSDAWDAGEDDDELLAMAAESLNSEVVMETANRVLRNHSQRQGRPTLQEGPGL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 QQKPRPEAEPPSPPSGDLRLVKSVSESHTSCPAESASDAAPLQRSQSLPHSATVTLGGTS
::::::::::::::::::::::::::::::::::
CCDS63 QQKPRPEAEPPSPPSGDLRLVKSVSESHTSCPAE--------------------------
110 120 130
190 200 210 220 230 240
pF1KB8 DPSTLSSSALSEREASRLDKFKQLLAGPNTDLEELRRLSWSGIPKPVRPMTWKLLSGYLP
:::::::::::::::::::::::::::
CCDS63 ---------------------------------ELRRLSWSGIPKPVRPMTWKLLSGYLP
140 150 160
250 260 270 280 290 300
pF1KB8 ANVDRRPATLQRKQKEYFAFIEHYYDSRNDEVHQDTYRQIHIDIPRMSPEALILQPKVTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 ANVDRRPATLQRKQKEYFAFIEHYYDSRNDEVHQDTYRQIHIDIPRMSPEALILQPKVTE
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB8 IFERILFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 IFERILFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIE
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB8 ADTYWCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 ADTYWCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFR
290 300 310 320 330 340
430 440 450 460 470 480
pF1KB8 WMNNLLMREVPLRCTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 WMNNLLMREVPLRCTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLF
350 360 370 380 390 400
490 500 510
pF1KB8 LQNLPTAHWDDEDISLLLAEAYRLKFAFADAPNHYKK
:::::::::::::::::::::::::::::::::::::
CCDS63 LQNLPTAHWDDEDISLLLAEAYRLKFAFADAPNHYKK
410 420 430
>>CCDS4832.1 TBC1D22B gene_id:55633|Hs108|chr6 (505 aa)
initn: 2100 init1: 1454 opt: 1805 Z-score: 1504.3 bits: 287.9 E(32554): 1.8e-77
Smith-Waterman score: 2145; 61.5% identity (82.1% similar) in 520 aa overlap (1-517:1-505)
10 20 30 40 50 60
pF1KB8 MASDGARKQFWKRSNSKLPGSIQHVYGAQHPPFDPLLHGTLLRSTAKMPTTPVKAKRVST
::.... ::::::: .::::::: ::::::::.:: : .... .:. :.:.: :..:.
CCDS48 MAAENS-KQFWKRS-AKLPGSIQPVYGAQHPPLDPRLTKNFIKERSKVNTVPLKNKKASS
10 20 30 40 50
70 80 90 100 110
pF1KB8 FQEFESNTSDAWDAGEDDDELLAMAA-ESLNSEVVMETANRVLRNHSQRQGRPTLQEGPG
:.:: ::::::: :.:..: .. . ..:::.:.. :: .::.:::.
CCDS48 FHEFARNTSDAWDIGDDEEEDFSSPSFQTLNSKVALATAAQVLENHSK------------
60 70 80 90 100
120 130 140 150 160 170
pF1KB8 LQQKPRPEAEPPSPPSGDLRLVKSVSESHTSCPAESASDAAPLQRSQSLPHSATVTL-GG
:. ::. : .. ...:: :... : . .. ::...:::: . : .
CCDS48 LRVKPERSQSTTSDVPANYKVIKSSSDAQLSRNSSDTCLRNPLHKQQSLPLRPIIPLVAR
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB8 TSDPSTLSSSALSEREASRLDKFKQLLAGPNTDLEELRRLSWSGIPKPVRPMTWKLLSGY
:: .. .. .. :: .::.::.:::.. ::::.:::. :: :.:. :::.::.:::::
CCDS48 ISDQNASGAPPMTVREKTRLEKFRQLLSSQNTDLDELRKCSWPGVPREVRPITWRLLSGY
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB8 LPANVDRRPATLQRKQKEYFAFIEHYYDSRNDEVHQDTYRQIHIDIPRMSPEA-LILQPK
::::..:: :::::..:::.:::.::::::.: :::::::::::::: .: :. ::
CCDS48 LPANTERRKLTLQRKREEYFGFIEQYYDSRNEEHHQDTYRQIHIDIPRTNPLIPLFQQPL
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB8 VTEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLC
: ::::::::::::::::::::::::::::::::::. ::.: :.:.. ::... ..:
CCDS48 VQEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEYVE-EDVENFDVTNLSQDMLR
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB8 NIEADTYWCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQF
.::::..:::::::::::::::::::::: ::: ::::::::::::: :. ..::.::::
CCDS48 SIEADSFWCMSKLLDGIQDNYTFAQPGIQKKVKALEELVSRIDEQVHNHFRRYEVEYLQF
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB8 AFRWMNNLLMREVPLRCTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQEL
::::::::::::.::::::::::::::::.::::::::::::::..::::::.:.::: :
CCDS48 AFRWMNNLLMRELPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLIKWRKEILDEEDFQGL
410 420 430 440 450 460
480 490 500 510
pF1KB8 LLFLQNLPTAHWDDEDISLLLAEAYRLKFAFADAPNHYKK
:..:::::: :: .:.:.::::::::::. ::::::::..
CCDS48 LMLLQNLPTIHWGNEEIGLLLAEAYRLKYMFADAPNHYRR
470 480 490 500
517 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 21:35:07 2016 done: Sat Nov 5 21:35:08 2016
Total Scan time: 3.220 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]