GENSCAN 1.0	Date run:  5-Nov-116	Time: 06:57:08

Sequence gi568815596r:106706681_106943977 : 237297 bp : 40.40% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -     46     41    6                               1.05
 1.07 Term -   7470   7327  144  0  0   68   43   133 0.926   3.73
 1.06 Intr -   7664   7499  166  1  1   68   87    86 0.294   5.54
 1.05 Intr -  23980  23791  190  2  1   87   85   159 0.643  13.22
 1.04 Intr -  28377  28299   79  0  1  111   87    27 0.421   3.11
 1.03 Intr -  38469  38331  139  2  1   56   62    92 0.047   2.95
 1.02 Intr -  62617  62405  213  0  0    4   92   145 0.452   3.41
 1.01 Init -  63687  63626   62  0  2   73  103    45 0.562   5.27
 1.00 Prom -  64838  64799   40                              -5.75

 2.03 PlyA -  64986  64981    6                               1.05
 2.02 Term -  85347  85089  259  2  1   59   38   729 0.991  59.04
 2.01 Init -  90993  90941   53  0  2   54   68    52 0.021   0.49
 2.00 Prom -  93066  93027   40                              -7.05

 3.10 PlyA -  93683  93678    6                               1.05
 3.09 Term -  94716  94574  143  1  2   78   48   121 0.543   4.21
 3.08 Intr -  96861  96699  163  0  1   46   77    73 0.433   0.63
 3.07 Intr - 100269 100064  206  1  2   55   32   132 0.065   2.30
 3.06 Intr - 111524 111447   78  0  0   69   94    63 0.038   3.60
 3.05 Intr - 123560 123386  175  2  1   99   74    85 0.939   6.79
 3.04 Intr - 125986 125885  102  1  0   91  119    39 0.963   6.75
 3.03 Intr - 127502 127369  134  0  2   45  110    76 0.481   4.94
 3.02 Intr - 136002 135855  148  0  1   93   19   170 0.164   9.49
 3.01 Init - 137114 136332  783  2  0  105   18   504 0.731  37.84
 3.00 Prom - 139630 139591   40                              -8.05

 4.00 Prom + 141659 141698   40                              -6.15
 4.01 Init + 150288 150352   65  2  2   68  115    54 0.630   6.77
 4.02 Intr + 151103 151203  101  2  2  116   71    31 0.525   3.03
 4.03 Term + 152856 153052  197  1  2   51   49   110 0.436  -0.01
 4.04 PlyA + 154912 154917    6                               1.05

 5.00 Prom + 157251 157290   40                              -8.05
 5.01 Init + 159774 159938  165  2  0   62   78   134 0.411   9.48
 5.02 Intr + 162744 162944  201  2  0  125  -22   108 0.319   2.06
 5.03 Intr + 165059 165158  100  1  1   24   93    96 0.394   2.46
 5.04 Intr + 166469 166587  119  0  2  132   93    19 0.308   6.06
 5.05 Intr + 168591 168639   49  2  1   94  109     9 0.281   0.93
 5.06 Intr + 176256 176430  175  1  1   70   40   144 0.046   5.88
 5.07 Term + 178804 179005  202  1  1   19   41   164 0.145   0.68
 5.08 PlyA + 179174 179179    6                               1.05

 6.06 PlyA - 179518 179513    6                               1.05
 6.05 Term - 179781 179608  174  0  0   91   47   137 0.754   6.68
 6.04 Intr - 180383 180296   88  1  1   75   91     7 0.656  -1.25
 6.03 Intr - 180962 180721  242  2  2    8   75   232 0.345   9.33
 6.02 Intr - 199270 199167  104  2  2   80   77    93 0.326   6.37
 6.01 Init - 199977 199773  205  0  1   55   63    81 0.163   1.36
 6.00 Prom - 200861 200822   40                              -5.85

 7.00 Prom + 204946 204985   40                              -6.15
 7.01 Sngl + 207468 207884  417  2  0   56   38   284 0.746  16.25
 7.02 PlyA + 208037 208042    6                               1.05

 8.00 Prom + 208709 208748   40                              -5.15
 8.01 Sngl + 209916 210221  306  2  0   68   42   153 0.374   4.32
 8.02 PlyA + 211561 211566    6                               1.05

 9.02 PlyA - 212571 212566    6                               1.05
 9.01 Term - 235085 234416  670  1  1   80   54   588 0.915  46.87

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:106706681_106943977|GENSCAN_predicted_peptide_1|330_aa
MLLGLCKFKPSGKMDDRGMECETQVALQPPTTPADSPGQEERCKVNCRGRSTQTCDENSP
ADPTGHSGMGECESLKDQSRVGLQPCIASEKRSQEWTLLPFKSSDYRIIEYYMYLQDLRI
VEKSDQHKAGVARSIPKKVPNFIHSINSVLKHDGAPSATEWGKEKHFVAPNLPACLQVGR
AQSEPMGYKWKLLRDGQCQLTRWLAFSSSDQVQELDARAREVILKTTRSQMLPSGSLKPE
LKERPLLSPQHVPVGPKLDVPTCCRALALLLLCAVCPRQLTLKAGSAIGGDGRHQREQAS
RRSLMYLFSACVSLQKSPLKATAAVRQSSS

>gi568815596r:106706681_106943977|GENSCAN_predicted_CDS_1|993_bp
atgcttctgggcttatgtaaatttaaaccaagtgggaagatggatgacagagggatggag
tgtgagactcaagtagctctccagcctccaacaacacctgctgacagtccaggacaggaa
gaaaggtgcaaagtcaactgcagagggaggagcacacaaacatgtgatgaaaactcacct
gcagaccctactggacacagtgggatgggggagtgtgagtctcttaaggatcagagcagg
gtaggactccagccctgtattgcctctgaaaaaagatcccaagaatggacgctattgcct
ttcaagagttcagactacagaataattgagtactacatgtacctacaagatttgagaata
gttgagaagagtgatcagcacaaggctggggttgcaaggagcatccccaagaaggtccct
aacttcatacacagtataaactcagtgttgaagcatgatggggcaccatctgctactgag
tggggaaaggaaaaacattttgttgcaccaaatctcccagcctgccttcaggtaggaaga
gcacagtctgagccaatgggatataagtggaagttgctacgggatggtcagtgtcagctg
acacgctggttggccttctcttcttctgaccaggttcaggaacttgatgctagagctaga
gaagtcatcttgaaaactacaaggtcccagatgttgccctctgggtctctgaagccagag
cttaaggagagacccctcttgtcccctcagcatgtgccagtgggacctaagctggatgtc
cccacctgctgcagggccctggcccttcttctcctctgtgctgtgtgccccagacagctg
accctaaaggctggttctgccattggaggtgatggcagacatcagagggagcaagcaagt
agacgaagcctgatgtatttgttctccgcatgtgtgtctctccagaaatcccccctgaag
gccacagctgctgtcaggcagtcctcttcatag

>gi568815596r:106706681_106943977|GENSCAN_predicted_peptide_2|103_aa
MGREQQDLVDTFGPSLGWKFPVTRGKKKKKKKEEERRRRKKKKEEERRRRKKKKEEERRR
KEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKNKKKKKKKKKP

>gi568815596r:106706681_106943977|GENSCAN_predicted_CDS_2|312_bp
atggggagagagcagcaggacctcgtggacactttcgggcctagcctgggatggaagttc
ccagtgaccaggggaaagaagaagaagaagaagaaagaagaagaaagaagaagaagaaag
aagaagaaagaagaagaaagaagaagaagaaagaagaagaaagaagaagaaagaagaaga
aaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaaaagaagaagaagaagaagaagaacaagaagaagaagaagaagaag
aagaaaccttga

>gi568815596r:106706681_106943977|GENSCAN_predicted_peptide_3|643_aa
MGAAHEPSPPGGLDARQALPRAHPAGSFHAGPGDLQKWAQSQDGFEHKEFFSSQVGRKSQ
SAFYPEDDDYFFAAGQPGWHSHTQGTLGFPSPGEPGPREGAFPAAQVQRRRVKKRHRRQR
RSHVLEEGDDGDRLYSSMSRAFLYRLWKGNVSSKMLNPRLQKAMKDYLTANKHGVRFRGK
REAGLSRAQLLCQLRSRARVRTLDGTEAPFSALGWRRLVPAVPLSQLHPRGLRSCAVVMS
AGAILNSSLGEEIGRSQRGDQKPQSAWICPQAVAPESPVNPSCSGNMGREQEEEARKQKL
PNQGVSSKEQENKSKLVTYVPLDSHDAVLRFNSAPTRGYEKDVGNKTTIRIINSQILTNP
SHHFIDSSLYKDVILVAWDPAPYSANLNLWYKKPDYNLFTPYIQHRQRNPNQPFYILHPK
FIWQLWDIIQENTKEKIQPNPPSSGFIGLYNQQMMKPASLCPSLQASEFPLAPGILIMMS
MCREVHVYEYIPSVRQTELCHYHELYYDAACTLGAYHPLLYEKLLVQRLNMGTQGDLHRK
GKPVTPGRRVTFNRPGVLMEYRCSSQGADLSHYVLIELLLQRTLCSGPRDGQLKVAWING
HMPENESGEIKWKRHIFRLTNLDVDLITQDFDECMALGDSSSA

>gi568815596r:106706681_106943977|GENSCAN_predicted_CDS_3|1932_bp
atgggcgccgcacatgagccctccccgcctgggggcctggacgcacgccaggcgctgccc
cgcgcccacccagccggttcctttcatgcggggcctggagacctgcagaaatgggcccag
tcccaagatgggtttgaacataaagagtttttttcatcccaggtggggagaaaatctcaa
agtgctttctacccggaggatgacgactacttttttgctgctggtcagccagggtggcac
agccacactcaggggacattgggattcccttcccccggggagccaggcccacgggagggg
gcttttccggctgcacaggtccagaggaggcgggtgaagaagaggcaccggaggcagaga
aggagccacgtgttggaggagggcgacgacggcgacaggctgtactcctccatgtccagg
gccttcctgtaccggctctggaaggggaacgtctcttccaaaatgctgaacccgcgcctg
cagaaggcgatgaaggattacctgaccgccaacaagcacggggtgcgcttccgcgggaag
cgggaggccgggctgagcagggcacagctgctgtgccagctgcggagccgcgcgcgcgtg
cggacgctggacggcaccgaggcgcccttttctgcgctgggctggcggcgcctggtgccc
gccgtgcccctgagccagctgcacccccgcggcctgcgcagctgcgctgtcgtcatgtct
gcaggcgcaatcctcaactcttccttgggcgaggaaataggtaggtctcagcggggggac
cagaaaccgcagtctgcatggatatgcccccaggctgtggcccctgaaagcccggtgaac
ccatcctgcagtgggaatatgggaagggaacaagaggaggaggcaagaaagcagaagctg
cccaatcagggcgtcagctccaaagagcaggagaacaaaagtaagcttgtcacttatgtg
cccttagattctcatgatgcggttttgagatttaactctgctcctacacgtggttatgag
aaagatgttgggaataaaaccaccatacgcatcattaattcgcagattctgaccaacccc
agccatcacttcattgacagttcactgtataaagacgtcattttggtggcctgggaccct
gccccatattccgcaaatcttaacctgtggtacaaaaaaccggattacaacctgttcact
ccatatattcagcatcgtcagagaaacccaaatcagccattttacattcttcatcctaaa
tttatatggcagctctgggatattatccaggagaacactaaagagaagattcaaccaaac
ccaccatcttctggtttcattgggctctacaatcagcaaatgatgaagccagccagcttg
tgtccttcccttcaggctagtgagttccccctggccccaggaatcctcataatgatgtcc
atgtgcagagaggtgcacgtgtatgaatatatcccatccgtgcggcagacggagctgtgc
cactaccacgagctgtactacgacgcagcctgcaccctcggggcgtaccacccactactc
tatgagaagctcctggtgcagcgcctgaacatgggcacgcagggggatttgcatcgcaag
ggcaagccagtcacaccaggcagacgggtaacctttaacagacctggtgttctcatggaa
taccgatgctcgtcccagggagctgacctttctcactatgtccttatagagctgctctta
cagagaactttgtgctcaggaccaagggatggtcaattaaaagttgcatggattaatggc
cacatgccggagaatgaaagtggcgaaatcaagtggaaaaggcatatatttaggctaaca
aatcttgatgttgacttaataacccaagattttgatgaatgcatggctttgggagactct
tcctcagcttga

>gi568815596r:106706681_106943977|GENSCAN_predicted_peptide_4|120_aa
MILVYTKITLADAEVPVKVIDRVASLGRCEQHGRRRLWGDTQEQCLAADKNNLHTAWPVT
QLPRSKTLVFFLIPFSTYNHIQSQPPANPDNPNSKTHLDSDNALPSVLPPCGPSRLSPEL

>gi568815596r:106706681_106943977|GENSCAN_predicted_CDS_4|363_bp
atgatcctggtatacacaaaaatcaccttggcagatgcagaggtgccagtgaaagtcata
gacagagtggcctctttgggcaggtgtgagcagcacggccgaaggaggttgtggggtgac
actcaagaacaatgcctcgctgctgacaagaataacctacacacagcatggccagtcact
cagttgcccaggtctaaaactctggtgtttttcttgattcctttttccacttacaaccac
atccaatcccaaccaccagcaaacccagataaccctaactccaaaacacatctagactct
gacaacgcattgccttctgtactgcccccatgtggacctagtcgcctctcacctgaacta
tga

>gi568815596r:106706681_106943977|GENSCAN_predicted_peptide_5|336_aa
MPHEHRTLVRSQCLGVQQDSKRVQGEYGTSTTSGGSHSSQRPCFLSEPELASNTKELQNI
DRPLNSGITAPILGSPQFGNGAKRLQLPPSQGGHGLTVYKVQTPPPAAAFALWAEAGPSK
LSVFRGSNTHGTAITYESNAFFWNPPEGPAWGCFTDVPSPVAISCRERWQNEVVAMHLIH
TGRGQHSSFLGFKLKDQAMPPTSASRVTGTTEQFSQPTSRPWVLWDNQEPAGGKVKIIVT
TAGTLLSPGLGPMLELDQITNSCKALGLPSYSALWKAALAGAIEFNFTQSPNTEPANPNE
MDVTLPTQKNASNIHSVTPRKVNPKAEFAACQLHKN

>gi568815596r:106706681_106943977|GENSCAN_predicted_CDS_5|1011_bp
atgcctcatgagcacaggactctggtgaggtcacaatgcttgggagttcagcaggactca
aaacgagtgcaaggtgagtatggtacctctacgacaagtggaggatcccacagctcccag
aggccatgctttctgtcagaaccagaactagcttcaaacacaaaagaacttcaaaatatc
gaccgccctttaaactcagggataactgctcccatcctaggaagcccgcaatttggaaat
ggggcaaagaggctccagctcccacccagtcagggagggcatgggctgactgtttacaaa
gtgcagacgccccctcctgctgctgcttttgctctctgggcagaagcagggccttcaaag
ctgtcagtcttcaggggcagtaacacgcatggaactgccatcacctatgaaagcaacgcc
ttcttctggaatcctcctgaaggacctgcctggggctgttttacagatgtccccagccct
gtggccatctcctgcagggagcgatggcagaatgaggttgtggccatgcatctgatacac
acaggtaggggacagcacagcagcttcctgggctttaagctaaaggatcaagcaatgccc
ccaacctcagcctccagagtaactgggaccacagaacaattctcccaaccaaccagtagg
ccctgggtactgtgggataatcaggaacctgcaggtggcaaagtgaagataatagtcaca
actgctgggaccctgctttcaccagggctaggaccaatgctggagctggaccagatcacc
aactcctgcaaagccttaggactgcccagctattcagctctttggaaggcagcacttgcg
ggagccattgagtttaacttcactcagtcccccaacacagaaccggcaaatccgaatgag
atggacgtcacactccctactcaaaagaatgcatcaaatatccactccgtaacaccgcgg
aaagtaaacccaaaagcggagtttgccgcctgccaactacataagaattaa

>gi568815596r:106706681_106943977|GENSCAN_predicted_peptide_6|270_aa
MLLKKTGTGKVLTKGSGDAEAFLLNNAPIIQRNKNHGGRMQPKEAFFKIQVFYADYQNVA
VEHYRYHLGTENRASTPQLLHILSYAYRAGTHSISARSSSNAQDQLPPSRENARAAVTSG
HSARDQTDTRWAPPRGPARRLQLPSSQPPTGSGGCFNHLSRRLLPQELSVPLGVGDRQCG
GAGSLCAFLHSCRRPGPECPGGVQARCQAGTVQLPPARSSAGPGEVIPQAAWDGSAGQLR
DPTVAGGGLEPAAGRLPPRTRLLQPPSSAA

>gi568815596r:106706681_106943977|GENSCAN_predicted_CDS_6|813_bp
atgctcttgaagaagactgggacagggaaagttctcacaaaggggagtggagatgctgaa
gcattcctcctaaacaatgctcccatcatacagagaaacaaaaatcatggaggaaggatg
cagccaaaggaggcattttttaaaatccaggtattttatgctgactaccaaaatgtggca
gtggagcattacaggtaccatctaggaacagaaaatcgtgcatccacaccccagctcctc
cacattctgagctatgcgtaccgtgctggtacccacagcatctcagcaagatcgagctcc
aatgcccaggaccagctgccgccgtctcgagaaaacgcaagggccgcggtgacaagtgga
cattccgcacgcgaccagaccgacactcgatgggcacctccccgcggccccgcccgcagg
ctccagctgcccagctcgcagccgcccactggctccggaggctgcttcaaccacttgtcc
cgccggcttctaccccaagaactttccgtccctcttggggttggggaccggcagtgtgga
ggggcgggcagcctgtgcgcattcctgcattcctgccgccgcccgggacccgagtgcccc
ggaggtgtccaggcgcggtgccaggcgggtactgtgcagctgccgccggcgcggagcagc
gctggccccggagaggtgatcccgcaggccgcctgggacgggagcgcggggcagctccga
gaccccacggtggcaggaggaggactcgagcctgcggcaggacgactcccgccgcgcact
cgccttctgcagcccccaagttccgcggcgtga

>gi568815596r:106706681_106943977|GENSCAN_predicted_peptide_7|138_aa
MEKAKWKPLKQPLPREIVNQKQYHIPGGSVEISATIKDLKDAGVVISTTSPCNSPIWPMQ
KTDGSWRMTVDYCKLNQVVTPIAAATPDVVTLFEQINTFPGAGYVAIDLANPFFFIPVHK
IHHKQLALGVYQLASPVS

>gi568815596r:106706681_106943977|GENSCAN_predicted_CDS_7|417_bp
atggaaaaggccaagtggaagccactaaaacaacctctgcctagagaaatagtaaaccaa
aagcaatatcacattcctggagggtctgtggagattagtgccaccatcaaggacttgaaa
gatgcaggggtggtgatttccaccacatccccatgtaattctcctatttggcctatgcag
aagacagatggatcttggagaatgacagtggattattgtaagcttaaccaggtggtgact
ccaattgcagctgctacgccagatgtggttacattgtttgagcaaattaacacatttcct
ggtgccggatatgtagctattgatctggcaaatccctttttcttcatccctgtccataag
atccaccataagcagttagccttaggggtttatcagctcgctagccctgtgtcataa

>gi568815596r:106706681_106943977|GENSCAN_predicted_peptide_8|101_aa
MYHPVSLISKIHRSRNQGTEMGVAPLAITPSNPLAKFLPSLLMTLFSADLENLFPKEEIL
PPGNTKMIPLNWKLTASQPLWTPYTSQLAGKEESYCAHRRD

>gi568815596r:106706681_106943977|GENSCAN_predicted_CDS_8|306_bp
atgtatcatcctgtttctctcatatccaagattcacaggtctagaaatcaagggacagaa
atgggagtagcaccactcgccattacccctagtaacccactagcaaaatttttgccttct
ctcctcatgactttattctctgctgatctagagaacttatttccaaaggaagaaatcctt
ccaccaggaaacacaaaaatgattccactgaactggaagttgactgccagccagccactt
tggactccttatacctctcaattagcaggcaaagaagaaagttactgcgctcacaggagg
gactga

>gi568815596r:106706681_106943977|GENSCAN_predicted_peptide_9|223_aa
XIFWPVSHRQQWVNCRLLRVKCQRLRAHKELLPVQRWLWRQGRCVPTTSLVAVSETAGAG
AAALALSRLCRCLQVSASARPFSSRTLSPQPKCWAMAASHQPIKGILKNKTSRTSSMVAL
SEQPCRTVHEELSKKCQKCDEMNILSTYHPADKDYGLMKIDEPSPPYHGITGDDENACSD
TETTETMVSDILAKKLAAAEGLEPKYWVQEQESSGEEDLLAEE

>gi568815596r:106706681_106943977|GENSCAN_predicted_CDS_9|672_bp
nnaatcttttggccagtgtctcaccgtcagcagtgggtcaactgcaggctgctaagggtc
aagtgccagcggctaagggcacataaggagctgctaccagttcagcgttggctctggcgt
cagggtcgttgtgtcccgacaacctctctggtagccgtttctgagacagcaggtgcaggt
gcggccgctttagccctgagcaggctctgccgctgcttgcaggtctctgctagcgcccga
cccttctcttcacggaccttgagcccacagcccaagtgctgggcaatggcagcctcgcac
cagcccatcaaggggatcctgaagaacaagacctccaggacttcctctatggtggcgttg
tcggaacagccctgcagaactgtccacgaggagctgagtaaaaaatgccagaagtgtgat
gaaatgaacatcctgtcaacatatcatccagcagacaaagactatggtttaatgaaaata
gatgagccaagccctccttaccatggtataacgggtgatgatgaaaatgcatgtagtgat
acagaaaccactgaaaccatggtatcagatatcttagctaagaaattagctgctgctgaa
ggcttagagccaaaatattgggttcaggaacaagaaagcagtggagaggaggacctctta
gctgaagaatga