GENSCAN 1.0	Date run:  4-Nov-116	Time: 21:42:28

Sequence gi568815593f:122675104_122929645 : 254542 bp : 39.45% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    888   1183  296  1  2   47   42   349 0.292  20.68
 1.02 PlyA +   1663   1668    6                               1.05

 2.00 Prom +   7558   7597   40                              -5.75
 2.01 Sngl +   9391  10779 1389  0  0   34   47   386 0.637  24.91
 2.02 PlyA +  11585  11590    6                               1.05

 3.00 Prom +  12595  12634   40                              -4.15
 3.01 Init +  18580  18664   85  0  1   45   82   140 0.977  10.13
 3.02 Intr +  19833  19939  107  1  2   50   82    71 0.774   1.71
 3.03 Intr +  24444  24614  171  2  0   73   67    83 0.329   3.92
 3.04 Term +  28349  28468  120  1  0  100   37    42 0.153  -2.21
 3.05 PlyA +  29659  29664    6                               1.05

 4.00 Prom +  33030  33069   40                              -3.65
 4.01 Init +  67139  67372  234  1  0   85   55   184 0.554  13.01
 4.02 Intr +  70656  70792  137  2  2   72   75    87 0.227   4.25
 4.03 Term +  93297  93624  328  0  1   31   49   624 0.573  46.00
 4.04 PlyA +  94406  94411    6                               1.05

 5.00 Prom +  95261  95300   40                              -3.55
 5.01 Init + 100001 100108  108  1  0  106   78    96 0.980  10.67
 5.02 Intr + 100261 100539  279  0  0   47   55   224 0.146  11.75
 5.03 Intr + 120163 120280  118  0  1   67   91   151 0.984  12.42
 5.04 Intr + 124589 124752  164  0  2   59   77   137 0.984   8.47
 5.05 Intr + 126766 126832   67  0  1   53   97   115 0.998   6.46
 5.06 Intr + 126978 127021   44  1  2  105  105    25 0.966   2.94
 5.07 Intr + 141812 141925  114  1  0   64   55   157 0.849   9.72
 5.08 Intr + 142177 142270   94  0  1   77   76    98 0.999   6.12
 5.09 Intr + 143715 143920  206  1  2   70   80   219 0.974  17.30
 5.10 Intr + 150947 151090  144  1  0   63   45   117 0.746   4.46
 5.11 Intr + 152472 152543   72  2  0   42  115    47 0.518   1.48
 5.12 Intr + 152827 152870   44  0  2   88   92   -15 0.005  -4.98
 5.13 Intr + 170512 170590   79  1  1   66   78   177 0.024  13.13
 5.14 Term + 193406 193564  159  1  0    4   39   190 0.911   2.66
 5.15 PlyA + 193934 193939    6                               1.05

 6.06 PlyA - 194033 194028    6                               1.05
 6.05 Term - 202959 202804  156  0  0   60   55   126 0.004   3.45
 6.04 Intr - 220577 220349  229  1  1    8   42   193 0.061   3.65
 6.03 Intr - 224158 223992  167  1  2   65   59   119 0.401   4.54
 6.02 Intr - 227234 227103  132  2  0   84   64   113 0.936   8.42
 6.01 Init - 228516 228424   93  0  0   83   82    36 0.687   2.93
 6.00 Prom - 232136 232097   40                              -2.35

 7.05 PlyA - 232678 232673    6                               1.05
 7.04 Term - 235677 235641   37  2  1   97   37    50 0.415  -3.37
 7.03 Intr - 237399 235980 1420  1  1   68   40   389 0.560  19.65
 7.02 Intr - 237695 237548  148  2  1   93   40    29 0.773  -2.51
 7.01 Init - 239551 239147  405  1  0   70   13   237 0.283  11.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 100261 100659  399  0  0   47   43   282 0.807  13.73
S.002 Init + 161419 161518  100  0  1   78   76   101 0.910   8.37
S.003 Term + 169823 170013  191  0  2   96   46   142 0.920   7.43
S.004 Init + 170531 170590   60  1  0  111   78   116 0.897  14.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:122675104_122929645|GENSCAN_predicted_peptide_1|98_aa
XSRVAGTTAIWRRHQERTSFTHQQYEELEALFSQTMFPDRNLQEKLALKRNLLESTGKGL
VQELAIQIEAAAAAAAAAAISKASKPDPFIQEECAHLP

>gi568815593f:122675104_122929645|GENSCAN_predicted_CDS_1|297_bp
ncctcccgagtagctgggactacagcaatatggagaaggcatcaagaacgtacttcattc
acccaccaacagtatgaagagctagaagctctgtttagccagactatgttcccagataga
aatcttcaggagaaactagctttgaaacgcaacctactggagtcaacaggtaaaggcttg
gttcaggaactggcaattcagattgaagcagcagcagcagcagcagcagcagcagcaatc
agcaaagcaagcaaaccagatcctttcatccaagaagaatgtgcccacctcccctag

>gi568815593f:122675104_122929645|GENSCAN_predicted_peptide_2|462_aa
MLKTLNKLGIDEMYLKIIRAIYDKPTANIILNGQKLEAFPFKTGTRQGCPLSPLLFNIVL
EVLARAIRQEKEIKGIQLGKGEAKLSLFADDMIVHIENPIVSAQNLLKLISNFSKVSGYK
INVQKSQAFLYTNNRQTESQIMSEVPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEI
KEDTNKWKNILCSWIGRINVVKMATLPQVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQK
RAHIARSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIIPHIY
NYLIFDRPDKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNIRPK
TIKTLEENPGNTIQDIGMGKDFMSKIPKAKATKARIDKWDLIKLKSFCTAKETTIRVNRQ
PAEWEKIFIIYSSDKGLLSRIYNELNQIYKKKTTPSTSGQRI

>gi568815593f:122675104_122929645|GENSCAN_predicted_CDS_2|1389_bp
atgctaaaaactctcaataaattaggtattgatgagatgtatctcaaaataataagagca
atttatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccct
ttcaaaactggcacaagacagggatgccctctctcaccactcctattcaacatagtgttg
gaagttctggccagggcaatcaggcaggagaaagaaataaagggtattcaattaggaaaa
ggggaagccaaattgtccctgtttgcagatgacatgattgtacatatagaaaaccccatc
gtctcagcccaaaatctccttaagctgataagcaacttcagtaaagtctcaggatacaaa
atcaatgtgcaaaaatcacaagcattcttatacaccaataacagacaaacagagagccaa
atcatgagtgaagtcccgttcacaattgcttcaaagagaataaaatacctaggaatccaa
cttacaagggacgtgaaggacctcttcaaggagaactacaagccactgctcaatgaaata
aaagaggatacaaacaaatggaagaatattctatgctcatggataggaagaatcaatgtc
gtgaaaatggccacactgccccaggtaatttatagattcaatgccatccccatcaagcta
ccaatgactttcttcacagaattagaaaaaactactttaaagttcatatggaatcaaaaa
agagcccacattgccaggtcaatcctaagccaaaagaacaaagctggaggcatcacgcta
cctgacttcaaactatactacaaggctacagtaaccaaaacagcgtggtactggtaccaa
aacagagatatagaccaatggaacagaacagagccctcagaaataataccacacatctac
aactatctgatctttgacagacctgacaaaaacaagcaatggggaaaggattccctattt
aataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttc
cttacaccttatacaaaaattaattcaagatggattaaagacttaaatattagacctaaa
accataaaaaccctagaagaaaacccaggcaataccattcaggacataggcatgggcaag
gacttcatgtctaaaataccaaaagcaaaggcaacaaaagccagaattgacaaatgggat
ctaattaaactcaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaa
cctgcagaatgggagaaaattttcataatctactcatctgacaaagggctactatccaga
atctacaatgaactcaatcaaatttacaagaaaaaaacaaccccatcaacaagtgggcaa
aggatatga

>gi568815593f:122675104_122929645|GENSCAN_predicted_peptide_3|160_aa
MGTDNWEKEKERETLLEEEEEEDMDKEVDIFLNQDKHEEKPENESVFIQVADHTLGPEPN
QSLEVSEFRLQEYTLIVIPGKTSFTINESLNTVKITRVVNTFLQDVLTQAPGRQASESSV
RAMRVDTSTAPRGQEGSFKKELETDTNLGLLVKSLRRKFV

>gi568815593f:122675104_122929645|GENSCAN_predicted_CDS_3|483_bp
atgggcacagacaattgggagaaggagaaggagagagagacactactagaagaggaggag
gaggaagacatggacaaggaagtagacattttccttaaccaagacaagcacgaggaaaag
ccagagaatgagagtgtattcattcaagtagctgaccacacacttggtccagaacccaat
cagtctcttgaggtcagtgagtttaggctccaggaatacacactcattgttatcccaggt
aaaacatcttttacaatcaatgaatcgttaaacacagtgaagatcactcgcgttgttaat
acttttctgcaggatgttcttacacaagccccaggaagacaggcaagcgagagttcagtc
cgtgccatgagagttgacactagcactgctccaagggggcaagagggaagtttcaagaag
gaactagaaacagacacgaatttgggtcttttagtcaaaagtcttcgcagaaagtttgtg
tga

>gi568815593f:122675104_122929645|GENSCAN_predicted_peptide_4|232_aa
MDIKLKRAWSVGRNPTGHAGPPISSHCLQPDDGAILHKKPAPFITELNTHLTQESEKLQE
DAGEGEQLQAQLLCYINEVSLARSVSHAFPEPIIVNGDETAIGGLEQSGLPHSHTCQDAE
YVARLGNKSKTLSQKKEEEEGEGEGEGEGEGEGEGEGEGEGEGEEEEEEEEEEEEEEEEE
EEEEEEEEKEEEEEEEETVIIKGCISLKHSTAIQALRHRSCAIQWILGQCRD

>gi568815593f:122675104_122929645|GENSCAN_predicted_CDS_4|699_bp
atggatataaagttgaagagagcctggtcagtgggccggaatccaacagggcacgctgga
ccccctatcagttctcattgcctccaaccagatgatggggctatcctacataagaagcca
gctcccttcatcacagaactaaacacacacctgacccaggagtcagagaagctgcaggag
gatgccggggaaggtgaacagttgcaggcccagcttctgtgctatattaatgaagtctca
ttggccagaagtgtgtcacatgcttttcctgaaccaatcattgtcaatggtgatgaaact
gctattggtggtttagagcaatcaggattaccacattcccacacctgccaagatgcagaa
tatgtggccagactgggtaacaaaagcaaaactctgtctcaaaaaaaggaagaagaagaa
ggagaaggagaaggagaaggagaaggagaaggagaaggagaaggagaaggagaaggagaa
ggagaaggagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaaaaagaagaagaagaagaagaagaagaaacagttatt
atcaaaggatgcattagtctgaagcactccactgccattcaggcactgagacataggagt
tgcgctatacaatggatacttggacagtgcagggattag

>gi568815593f:122675104_122929645|GENSCAN_predicted_peptide_5|563_aa
MAAEREPPPLGDGKPTDFEDLEDGEDLFTSTVSTLERDVLGLSAGPPQESSLRPAGADLI
LRGARTEPSIAAALSQLSWPSSVSLARPPLQAGEGLALHPSKPPPSSFEGVLAFPFQREG
VPLPGERNESSPSSPEPASLPAEDISANSNGPKPTEVVLDDDREDLFAEATEEVSLDSPE
REPILSSEPSPAVTPVTPTTLIAPRIESKSMSAPVIFDRSREEIEEEANGDIFDIEIGVS
DPEKVGDGMNAYMAYRVTTKLPRAVNTQALSGAGILRMVNKAADAVNKMTIKMNESDAWF
EEKQQQFENLDQQLRKLHVSVEALVCHRKELSANTAAFAKSAAMLGNSEDHTALSRALSQ
LAEVEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDHRMKCWQKWEDAQITLLK
KREAEAKMMVANKPDKIQQAKNEIREKERVKDFKTVIIKYLESLVQTQQQFVFLVGQTCL
SKFSYRLAGAAMEVYIPSFRYEESDLERGYTQPARDSKQHPYLPRILQAPLDLLDHMAEV
AEQFAWQLGPIAEPIHILGPTQN

>gi568815593f:122675104_122929645|GENSCAN_predicted_CDS_5|1692_bp
atggcggccgagagggaacctcctccgctgggggacgggaagcccaccgactttgaggat
ctggaggacggagaggacctgttcaccagcactgtctccaccctagagagggatgtgctt
gggctgagcgcagggcctcctcaggagagcagcctgcggcccgcgggtgccgacctaatc
ctcagaggggccagaaccgaaccgagcattgcagcggcgctttcccagctcagctggcct
tcctcggtgtctcttgcacgtcctcctcttcaagccggagaagggcttgctctgcatccc
agtaaacctccaccgagctcttttgaaggggtgctcgcttttcctttccagagggagggt
gtgccgctgccaggggagcgcaatgaatcaagtccatcatctccagaaccagctagtctt
cctgcagaagatattagtgcaaactccaatggcccaaaacccacagaagttgtattagat
gatgacagagaagatctttttgcagaagccacagaagaagtttctttggacagccctgaa
agggaacctatcctatcctcggaaccttctcctgcagtcacacctgtcactcctactaca
ctcattgctcctagaattgaatcaaagagtatgtctgctcccgtgatctttgatagatcc
agggaagagattgaagaagaagcaaatggagacatttttgacatagaaattggtgtatca
gatccagaaaaagttggtgatggcatgaatgcctatatggcatatagagtaacaacaaag
ctgcctagagcagttaatacacaggctctgagtggagcaggaatattgaggatggtgaac
aaggctgccgacgctgtcaacaaaatgacaatcaagatgaatgaatcggatgcatggttt
gaagaaaagcagcagcaatttgagaatctggatcagcaacttaggaaacttcatgtcagt
gttgaagccttggtctgtcatagaaaagaactttcagccaacacagctgcctttgctaaa
agtgctgccatgttaggtaattctgaggatcatactgctttatctagagctttgtctcag
cttgcagaggttgaggagaagatagaccagttacatcaagaacaagcttttgctgacttt
tatatgttttcagaactacttagtgactacattcgtcttattgctgcagtgaaaggtgtg
tttgaccatcgaatgaagtgctggcagaaatgggaagatgctcaaattactttgctcaaa
aaacgtgaagctgaagcaaaaatgatggttgctaacaaaccagataaaatacagcaagct
aaaaatgaaataagagagaaagaacgagtgaaggattttaaaaccgttatcatcaagtac
ttagaatcactagttcaaacacaacaacagtttgttttccttgttggtcagacctgtttg
agtaaattctcataccggctggccggcgcggccatggaggtctacatcccgtcctttcgc
tatgaagagagcgacctggagcggggatacacgcaacctgccagagactccaaacaacat
ccgtatctgccacggatacttcaggcaccattggatctgctggatcatatggccgaagtg
gcagagcagtttgcatggcagcttggacctattgcagagcctatccatattctgggaccc
actcaaaactag

>gi568815593f:122675104_122929645|GENSCAN_predicted_peptide_6|258_aa
MGLHSRNKDELSSVQVPSPQEIIRCIKHDLQPLEPGAIPTGVERGSALHYTYKSDLQAIE
SQEAIEIFRKANSEENIYCQNPTNSKGFTSLAPKSPRLAARCMLKTIGVKRAEETVFFRW
GTDLTVEAVRRARWPGEAAAAGMRGHTLQTCPLRGMIIHHPPAPSLGASHTTPSFHQKRT
QCRCASASNHQDPRLPTPLVQDVGYKMVSHHSLVWIPQQLAPSTPCQSRKSQIQVESQAS
SEQSGHPACVVAIFQSMA

>gi568815593f:122675104_122929645|GENSCAN_predicted_CDS_6|777_bp
atgggtcttcattcacgcaacaaagatgagctgagcagtgtgcaggtgcccagtccacag
gagataattagatgcataaagcatgatttgcagcctcttgaacctggtgccatcccaact
ggagttgaaaggggttcagcactacactacacctacaagtctgaccttcaggctatagag
agccaagaggcaatagaaatattcagaaaggcaaactcagaagagaacatctactgccag
aaccctaccaacagcaagggatttactagtctagctccaaagtcaccacgactcgcagcc
aggtgtatgttgaagactataggagtgaaaagagcagaagagactgtgttcttcaggtgg
ggcacagatctcacagtggaggctgtcaggagggcacgctggcctggagaagcagcagct
gctggcatgcgtggacacactttgcagacgtgtcccctgcgggggatgataattcatcac
cctccagcccccagcctaggggcctctcacacaaccccatccttccaccagaaaagaaca
cagtgccgatgtgcctctgcttccaatcaccaggacccaaggttgcctacacccttggtc
caagatgtgggatacaaaatggtcagccatcattcccttgtgtggattcctcaacaactt
gctccctcaacaccttgccagtccaggaaaagccagattcaggttgagtctcaagcatca
tctgaacagagtggacatccggcatgtgtagtggccatctttcaaagcatggcctga

>gi568815593f:122675104_122929645|GENSCAN_predicted_peptide_7|669_aa
MDKFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFYEASIILIPKPDRDTTRKENCRPISLMNIDAKILNKILA
NRIQQHIKKLIHHDQTLPNPPLLETPKNDQLKKKKKTHMIISIDAEKAFDKIQQRFMLKP
LNKLVLEVLARAMRQEKEIKGIQLGKEEVKLSRFADDMIVYLENPIVSAQNLLKLISNFS
KVSGYKINVQKSQAFLYTNNRQTESQIVSELPFTIASKRIKYLGIQLTRDVKDLFKENYK
PLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLK
FIWNQKRARIAKSILSQKNKAGSITLPDFKLYYKATVSKTAWYWYQNRDIDQWNRTEPSE
ITPLIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKD
LNVRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETT
IRVNRQPTKRKKIFTTYSSDEGLISRIYNELKQIYKKKTNNPIKKWAKDMNRHISKEDIY
AAKRHMKKCSSSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNKCWRGCGEIGTLLHCWDM
DEIGNHHSQ

>gi568815593f:122675104_122929645|GENSCAN_predicted_CDS_7|2010_bp
atggataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggatctgaaattgtggcaataatcaatagcttaccaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcatcctgataccaaagcctgacagagacacaacaagaaaagag
aattgtagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaccgaatccagcaacacatcaaaaagcttatccatcatgatcaaaccctgccaaatccc
cctctgctagaaacacccaagaatgatcaattaaaaaaaaaaaaaaaaacccacatgatt
atctcaatagatgcagaaaaggcctttgacaaaattcaacaacgcttcatgctaaaacct
ctcaataaattagtgttggaagttctggccagggcaatgaggcaggagaaggaaataaag
ggtattcaattaggaaaagaggaagtcaaattgtcccggtttgcagatgacatgattgta
tatctagaaaaccccattgtctcagcccaaaatctccttaagctcataagcaacttcagc
aaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaataac
agacaaacagagagccaaatcgtgagtgaactcccattcacaattgcttcaaagagaata
aaatacctaggaatccaacttacaagggacgtgaaggacctcttcaaggagaactacaaa
ccactgctcaaggaaataaaagaggatacaaacaaatggaagaacattccatgctcatgg
gtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaat
gccatccccatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaag
ttcatatggaaccaaaaaagagcccgcatcgccaagtcaatcctaagccaaaagaacaaa
gctggaagcatcacgctacctgacttcaaactatactacaaggctacagtaagcaaaaca
gcatggtactggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaa
ataacgccgcttatctacaactatctgatctttgacaaacctgagaaaaacaagcaatgg
ggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatgtagaaag
ctgaaactggatcccttccttacaccttatacaaaaattaattcaagatggattaaagac
ttaaacgttagacctaaaaccataaaaaccctagaagaaaacctaggcattaccattcag
gacataggcatgggcaaagacttcatgtctaaaacaccaaaagcaatggcaacaaaagcc
aaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactacc
atcagagtgaacaggcaacctacaaaacggaagaaaattttcacaacctactcatctgac
gaagggctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaac
aaccccatcaaaaagtgggcaaaggatatgaacagacacatctcaaaagaagacatttat
gcagccaaaagacacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatc
aaaaccacaatgagataccatctcactccagttagaatggcaatcattaaaaagtcagga
aacaacaagtgctggagaggatgtggagaaataggaacacttttacactgttgggacatg
gatgaaattggaaatcatcattctcagtaa