GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:28:55

Sequence gi568815584r:77618091_77855122 : 237032 bp : 43.97% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  26360  26502  143  1  2   49   44    92 0.223   0.51
 1.02 Term +  34842  35046  205  0  1   57   38   142 0.218   2.94
 1.03 PlyA +  38530  38535    6                               1.05

 2.07 PlyA -  40270  40265    6                               1.05
 2.06 Term -  56151  55722  430  2  1   60   53   171 0.700   5.57
 2.05 Intr -  57704  57566  139  0  1   74  109   143 0.982  14.52
 2.04 Intr -  61880  61795   86  1  2  102   70    50 0.959   4.06
 2.03 Intr -  76777  76648  130  2  1   84  107    73 0.837   8.55
 2.02 Intr -  86387  86279  109  2  1  110  105    92 0.953  12.96
 2.01 Init -  89914  89732  183  1  0   89   87   336 0.667  32.72
 2.00 Prom -  91314  91275   40                              -4.86

 3.17 PlyA -  91517  91512    6                               1.05
 3.16 Term - 100196  99998  199  1  1   69   48   196 0.999  10.57
 3.15 Intr - 100440 100277  164  0  2   98   50   130 0.984   8.97
 3.14 Intr - 102738 102621  118  2  1   55   82   154 0.895  11.97
 3.13 Intr - 105214 105091  124  2  1   13   92    69 0.532  -0.56
 3.12 Intr - 113039 112898  142  2  1   42   86    61 0.775   1.23
 3.11 Intr - 114511 114395  117  1  0  101   81   133 0.987  14.56
 3.10 Intr - 116922 116857   66  0  0  122   86    15 0.933   3.80
 3.09 Intr - 117916 117847   70  0  1   91   61    10 0.994  -2.22
 3.08 Intr - 118985 118881  105  1  0   91  108    61 0.989   7.73
 3.07 Intr - 120794 120688  107  2  2   91   76    69 0.998   5.01
 3.06 Intr - 120971 120876   96  2  0   65   78   100 0.932   6.91
 3.05 Intr - 133390 133229  162  1  0   53   84   203 0.977  16.57
 3.04 Intr - 137030 136877  154  1  1   93   73    21 0.669   1.17
 3.03 Intr - 143193 143024  170  0  2   21   94    77 0.002   0.34
 3.02 Intr - 170672 170482  191  0  2   92   72    82 0.338   6.30
 3.01 Init - 182243 182147   97  2  1   72   50    88 0.135   1.88
 3.00 Prom - 187505 187466   40                              -3.86

 4.00 Prom + 198158 198197   40                              -7.26
 4.01 Init + 200889 201023  135  2  0  113   90   171 0.769  17.97
 4.02 Intr + 204345 204428   84  2  0   83  115   109 0.999  13.12
 4.03 Intr + 207786 207938  153  2  0  110  103    38 0.926   7.77
 4.04 Intr + 213023 213137  115  1  1   31   72    45 0.271  -2.78
 4.05 Intr + 216583 216707  125  2  2   40  110    93 0.475   7.00
 4.06 Term + 226948 226956    9  0  0  114   54     0 0.020  -2.61
 4.07 PlyA + 229990 229995    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  69727  69616  112  0  1  103   44    80 0.801   3.13


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:77618091_77855122|GENSCAN_predicted_peptide_1|115_aa
MLYNAHTINYENSLGITVDTVSFSQAPDLPPVILANTEHLLCAKHYANHSKLIESCDPRR
YNEFSNKMKAQVLGQKATHRVSSKHRKPWQLLSLIGMPALTTTSFLADGKMDGCV

>gi568815584r:77618091_77855122|GENSCAN_predicted_CDS_1|348_bp
atgctgtacaatgcacacaccataaattatgagaacagtctgggaattacggttgacact
gtcagcttctcgcaagcccctgatcttcctcctgttatattagctaacactgaacactta
ctctgtgccaagcactatgctaaccacagcaaacttatagagagctgcgacccccgcaga
tacaatgagttctcaaacaagatgaaagcacaggtgcttggccagaaggccacgcatcgg
gtttcgtcaaagcaccggaagccatggcagttactgtccttgataggtatgccagcctta
acaacaacgtccttcttggctgatgggaaaatggacggctgtgtttga

>gi568815584r:77618091_77855122|GENSCAN_predicted_peptide_2|358_aa
MGKMAAAVGSVATLATEPGEDAFRKLFRFYRQSRPGTADLEGVIDFSAAHAARGKGPGAQ
KVIKSQLNVSSVSEQNAYRAGLQPVSKWQAYGLKGYPGYQWHWVKQCLKLYSQKPNVCNL
DKHMSKEETQDLWEQSKEFLRYKEATKRRPRSLLEKLRWVTVGYHYNWDKQVAAACGFED
FRAEAGILNYYRLDSTLGIHVDRSELDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMH
SGDIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMVEPCSMEDWQVCA
SYLKTARVNMTVRQVLATDQNFPLEPIEDEKRDISTEGFCHLDDQNSEVKRARINPDS

>gi568815584r:77618091_77855122|GENSCAN_predicted_CDS_2|1077_bp
atggggaagatggcagcggccgtgggctctgtggcgactctggcgactgagcccggggag
gacgcctttcggaaacttttccgcttctaccgtcagagccggcccgggaccgcagacctg
gaaggggtcatcgacttctcggcggcccacgcagcccgtggcaagggtcctggtgcccaa
aaggtgatcaaatctcagctaaatgtgtcttctgtcagtgagcagaatgcatatagagca
ggtcttcagcccgtcagcaagtggcaagcctatggactcaaaggctatcctggttaccag
tggcactgggtgaaacagtgccttaagttatattcccagaaacctaatgtatgtaacctg
gacaaacacatgtctaaagaagagacccaagatctgtgggaacagagcaaagagttcctg
aggtataaagaagcgactaaacggagaccccgaagtttactggagaaactgcgttgggtg
accgtaggctaccattataactgggacaagcaagtagccgctgcctgtggatttgaggat
ttccgagctgaagcagggatcctgaattactaccgcctggactccacactgggaatccac
gtagacagatctgagctagatcactccaaacccttgctgtcattcagctttggacagtcc
gccatctttctcctgggtggtcttcaaagggatgaggcccccacggccatgtttatgcac
agtggtgacatcatgataatgtcgggtttcagccgcctcttgaaccacgcagtccctcgt
gtccttccaaatccagaaggggaaggcctgcctcactgcctagaggcacctctccctgct
gtcctcccgagagattcaatggtagagccttgttctatggaggactggcaggtgtgtgcc
agctacttgaagaccgctcgtgttaacatgactgtccgacaggtcctggccacagaccag
aatttccctctagaacccatcgaggatgaaaaaagagacatcagtacagaaggtttctgc
catctggatgaccagaatagcgaagtaaaacgggccaggataaaccctgacagctga

>gi568815584r:77618091_77855122|GENSCAN_predicted_peptide_3|693_aa
MGLSLPAPRAAAQPEQRPTPGVSMPVPSRSRRGDLWQCLETFVIVMTWEMLLASSGQRSS
VLLDILQCTELAFTTKNCPVPNVNSITVEKPWSIYQNTNGTPVQRTTNPRRPFRPERLRI
AHSFLSAPHHLERPAQRCCRSRWKKRKKMALTSFLPAPTQLSQDQLEAEEKARSQRSRQT
SLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKMSNALAIQVDS
EGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEITEKTRVALE
KSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRF
KINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADG
RGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLREMAQKAR
ERRAGIKTHVEKVKYFSTVHTEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRN
ENRDISEVIALGVPNPRTSNEVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDM
AQSIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEEDPFGLDK
FLEEAKQHGGSKRPSDSSRPKEHEHEGKKRRKE

>gi568815584r:77618091_77855122|GENSCAN_predicted_CDS_3|2082_bp
atggggctgtccctcccggcgcccagggcggctgcacaaccggagcagaggccgactccc
ggcgtgtccatgccggttccctcgcgctccaggcgcggggatctttggcaatgtctggag
acatttgtgattgtcatgacttgggagatgctactggcatctagtgggcagaggtcaagt
gtgttgttggacatcttacaatgcacagaactggccttcacaacaaagaactgtccagtt
ccaaatgtcaacagtatcactgtggagaaaccctggtcaatctatcagaatacaaacggt
actcctgttcaaagaactacaaatcccagaaggccttttcggccagagcgcctgcgcatc
gcgcactccttcctttccgctcctcatcatctggaaagacccgcccagcggtgctgtcgc
tcgcgctggaagaagcggaagaagatggcgctcaccagctttttacctgcacctactcag
ctatctcaggaccagcttgaggctgaagaaaaggcaagatcccagagatcacggcagacc
tcactggtctcctcccgaagagaacctcccccgtacggataccggaaaggctggatacct
cggttattagaggattttggagatggaggtgcttttccagagatccatgtggcccagtat
ccactggatatgggacgaaagaaaaaaatgtcgaatgcgctggccattcaggtggattct
gaaggaaaaattaaatatgatgcaattgctcgacaaggacagtcaaaagacaaggtcatt
tatagcaaatacactgacctggttccaaaggaggttatgaatgcagatgatccagacctg
caaaggcccgatgaagaagctattaaagagataacagaaaagacaagagtagccttagaa
aaatctgtatcacagaaggtcgccgcagccatgccagttcgagcagctgacaaattggct
cctgctcagtatatccgatacacaccatctcagcaaggagtggcattcaactctggagct
aaacagagggttattcggatggtagaaatgcagaaagatccaatggagcctccaaggttc
aagattaataagaaaattccccggggaccaccttctcctcctgcgcctgtcatgcattct
cctagccgaaagatgactgtaaaggaacaacaagagtggaagattcctccttgtatttct
aactggaaaaatgcaaagggttatacaattccattagacaaacgtctggctgctgatgga
agaggactacagacagtacacataaatgaaaatttcgccaaattggcagaagccctctac
attgctgatcggaaggctcgtgaagctgtggaaatgcgtgcccaagtagagagaaaaatg
gctcagaaagaaaaggaaaaacatgaagagaaacttagagaaatggcccagaaagccagg
gagagaagagctgggatcaaaactcatgtggaaaaagtgaagtacttttcaactgttcac
acagaggatggggaggcacgtgagagggatgaaatccggcatgacaggcgaaaagagaga
cagcatgaccggaatctttccagggcagctcctgataagaggtcgaaacttcagagaaat
gaaaatcgggatatcagtgaagttattgctctcggtgttcctaatcctcggacttccaat
gaagttcagtatgaccaaaggctcttcaaccaatccaagggtatggacagtggatttgca
ggtggagaagatgaaatttataatgtttatgatcaagcctggagaggtggtaaagatatg
gcccagagtatttataggcccagtaaaaatctggacaaggacatgtatggtgatgaccta
gaagccagaataaagaccaacagatttgttcccgacaaggagttttctggttcagaccgt
agacagagaggccgagaaggaccagtgcagtttgaggaagatccttttggtttggacaag
tttttggaagaagccaaacagcatggtggctctaaaagaccctcagatagcagccgcccc
aaggaacacgagcatgaaggcaagaagaggaggaaggaatag

>gi568815584r:77618091_77855122|GENSCAN_predicted_peptide_4|206_aa
MARKALKLASWTSMALAASGIYFYSNKYLDPNDFGAVRVGRAVATTAVISYDYLTSLKSV
PYGSEEYLQLRSKLTGAMGLGIHWCNILRRACRLGHRGKASALRNLQRRQAMGVKKTVAC
HVSHADMAGQASQLGDCLLEEEGAENQCFADKQIPNREERGRAHSSSRVHVCSSLTYVGC
LDTWVGFLLLQSCPPVAPTTWFYRMS

>gi568815584r:77618091_77855122|GENSCAN_predicted_CDS_4|621_bp
atggccagaaaggctctcaagcttgcttcgtggaccagcatggctcttgctgcctctggc
atctacttctacagtaacaagtacttggaccctaatgactttggcgctgtcagggtgggc
agagcagttgctacgacggctgtcatcagttacgactacctcacttccctgaagagtgtc
ccttatggctcagaggagtacttgcagctgagatctaagctaaccggtgctatgggcctt
ggcatccactggtgtaacattctacggagagcttgcaggctcggacacaggggcaaggcc
tctgctttacggaatctgcagaggaggcaggcgatgggtgtcaaaaagacagttgcctgt
cacgtgtcacatgcagacatggctggacaagcctctcagttgggggactgcctcttagag
gaggaaggagctgaaaatcaatgctttgcagataagcagatcccaaacagagaggagaga
ggaagggcacacagttcctctcgtgtgcatgtctgcagctccctcacctatgtgggctgc
ctggacacatgggtgggcttcctgctacttcagagctgccctccagttgcccctaccacc
tggttctacaggatgagctga