GENSCAN 1.0	Date run:  4-Nov-116	Time: 23:40:21

Sequence gi568815589r:6648706_6848981 : 200276 bp : 44.62% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  13661  13837  177  1  0   38   47   205 0.155  10.66
 1.02 Intr +  21344  21515  172  1  1   32   17    98 0.001  -3.38
 1.03 Term +  32427  32584  158  1  2   27   42   195 0.718   6.90
 1.04 PlyA +  33959  33964    6                               1.05

 2.00 Prom +  47877  47916   40                              -3.56
 2.01 Init +  49219  49221    3  0  0  102   81     0 0.047   0.70
 2.02 Intr +  55904  55948   45  1  0  105   72    33 0.013   2.01
 2.03 Intr +  67191  67440  250  2  1   73   52   124 0.093   4.31
 2.04 Intr +  77732  77946  215  0  2   70   25   147 0.018   5.03
 2.05 Intr + 108717 108901  185  2  2    1   54   187 0.256   5.19
 2.06 Intr + 110236 110389  154  1  1   47   92   104 0.466   6.77
 2.07 Intr + 112737 112758   22  2  1   97   58    -1 0.008  -5.08
 2.08 Intr + 144267 144427  161  1  2  123   55   111 0.384  11.01
 2.09 Intr + 156894 157069  176  2  2   92   89   173 0.920  16.54
 2.10 Intr + 165926 166040  115  2  1   79   73   114 0.900   9.45
 2.11 Intr + 185745 185851  107  2  2   55   -3   166 0.112   3.21
 2.12 Intr + 186025 186223  199  1  1  -12   -7   361 0.356  15.95
 2.13 Term + 186235 186888  654  0  0   33   33   889 0.442  71.90
 2.14 PlyA + 187439 187444    6                               1.05

 3.02 PlyA - 188135 188130    6                               1.05
 3.01 Term - 193068 192944  125  1  2   34   47   140 0.342   3.05

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:6648706_6848981|GENSCAN_predicted_peptide_1|168_aa
MPKFSYELHFHLSGSSSSDLVVGKNKLLMKGSKKGAKKKVFDPSSKKDWYDVEAPAMFSE
RDSGNRLPRQLAPPYNIASRKEHFNTSLQGSRTPHSVPTDTKICAYPRMFKSLIYSGSKK
TQRTAPVQVPLEKWNLTEKLIWGGSPLGSPDSLNATTVPHTDCHERVT

>gi568815589r:6648706_6848981|GENSCAN_predicted_CDS_1|507_bp
atgcctaaattctcatatgagttgcatttccacctttctggctcttcgagcagcgacttg
gtggttggcaagaacaagctccttatgaaaggcagcaaaaagggagccaagaagaaggta
ttcgatccatcttctaagaaagactggtatgatgtggaagcacctgctatgttcagtgag
cgagactcgggtaatcggctgccgcggcagctggcaccgccttacaatatagcgagccgc
aaagagcattttaacacaagcctccagggttcccggacaccccactctgtccccacggat
accaaaatctgcgcgtatccgcgcatgttcaagtccctaatatattctgggagcaagaag
acgcagaggaccgcgccggttcaggtgccgctggagaaatggaatctgacggagaaactg
atctggggcggcagcccgctaggttcgcctgactcactaaatgctactacagtgccccac
acggactgccacgagcgggtcacgtga

>gi568815589r:6648706_6848981|GENSCAN_predicted_peptide_2|761_aa
MLSRGPELAVQPSGASSLVQVFPFKGSTCAGRVPHNEESFANKRGRCSKVSGNRLAKPRS
SHLGKMAQEQEGETRGRRTREAPSSEVAQCSAPPLTSRLAKSVMTHLAITSSKLSPQPLL
PGNECFKTTVLSCLGNTFAFLRFSLATMVTLHTAFLNSRAGGPINTSSSSKLLKGWDTKI
LFAYSGSPIVGRRLSGPGHRVKGEREHSAVIAGELRAPTFSPGSPVHSEAPPRKASSRDS
DAFRVDLMLGSPFAARCKPALAGSDCGQYYREGFCQVPSSGRDKSTSPSLSNTALTIMEV
AEVESPLNPSCKIMTFRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDD
IDNLLIPAPIQQMVTGQSGLFTQYNIQKKAMTVKEFRQLANSGKYCTPRYLDYEDLERKY
WKNLTFVAPIYGADINGSIYDELTIDDDIATPVVDNGSGMWKAGFAGDDDPRPSSPSSEL
HVVPEEHPMLLTEAPLNPKASREKMTQIMFETFITPAMYMAIQPVLSLYFFGCTTGTVMD
SGDGCAHLRGICPPPHHPASGPGWPGPDYLMKILTERGYSFTTTAEWDIVRDIKEKLCYV
ALAFEQEMAMAASSSSLEKSYELTDGQVITIGNEQFCCPEALFQLSFLGMESCGIHETTL
NSIMKCDVDIHKDLYANTLLSGGTTMYPSVANRMQKEITALAPSTMKIKIIAPPELKHSV
WIGGSILASLSTFQQMWISKQEYDESGSIIHPSNASRRTVT

>gi568815589r:6648706_6848981|GENSCAN_predicted_CDS_2|2286_bp
atgctctctagaggaccagagttggcggtgcagcccagcggagcttcgagcctcgtccag
gtgttcccatttaaaggctccacctgcgcagggcgggtgccacacaatgaggagagtttt
gcaaacaaacgcggccgttgctccaaggtctcgggtaaccgattggcaaaacctaggtct
tcccacttagggaagatggcccaagagcaagaaggcgaaacaagaggccgccggacccgc
gaagccccgagctcagaggtcgcccagtgctcggccccgcctctgacgtcacggctcgct
aagtcagtgatgacacatctggctatcaccagctcaaagctgtctcctcaaccactttta
ccagggaatgaatgcttcaagaccacagtgctctcctgccttggaaacaccttcgccttc
ctccgcttctctttggctaccatggtcaccctccacactgctttcctcaactctcgggca
ggtggtcccatcaatacctcctcctcctccaagttgttaaagggttgggacacgaagata
ctcttcgcctattcgggatctcccattgtgggaaggaggctcagtggtcccggccaccgg
gtgaagggagaacgggaacacagcgctgtcatcgccggagagctgcgagccccgactttc
tcgccaggctctccagtacattccgaggctccaccccgtaaagccagcagccgggattca
gatgctttccgcgtggacttgatgctgggctccccctttgctgcgcggtgcaagcctgcg
ctggctggctctgattgtgggcaatactaccgggaggggttttgtcaggttccttcttcc
ggaagagacaagtccaccagccccagcctctcaaacactgccctaaccatcatggaggtg
gccgaggtggaaagtcctctgaaccccagctgtaagataatgaccttcagaccctccatg
gaggagttccgggagttcaacaaataccttgcatacatggagtctaaaggagcccatcgt
gcgggtcttgcaaaggtgattcctcctaaggagtggaagccaagacagtgctatgatgac
attgataatttgctcattccagcaccaattcagcagatggtcacagggcagtcaggactg
ttcactcagtacaacatccagaaaaaagcgatgactgtgaaggagttcaggcagctggcc
aacagtggcaaatattgtactccaagatacttggattacgaagatttggagcgcaagtac
tggaagaacttaacttttgtggcacctatctatggtgcagatattaatgggagcatatat
gatgagctcaccatagatgatgatattgctacgcccgtcgtcgacaacggctccggcatg
tggaaggctggcttcgcaggtgacgatgacccccggccgtcttccccttcatcggagctg
catgtggttcccgaggagcatcccatgctgctgaccgaggcccccctgaaccccaaggcc
agccgcgagaagatgacccagatcatgtttgagaccttcatcaccccagccatgtacatg
gccatccagcccgtgctgtccctgtacttctttggctgtaccactggtaccgtgatggac
tccggtgacgggtgtgcccatctgcgagggatatgccctcccccacaccatcctgcatct
ggacctggctggccgggacctgactacctcatgaagatccttaccgagcgtggctacagc
ttcaccaccacggctgagtgggatatcgtgcgtgacatcaaggagaagctgtgctatgtt
gctctggccttcgagcaggagatggccatggcggcttccagctcctccctggagaagagc
tatgagctgactgacggccaggtcatcaccatcggcaacgagcagttctgctgccctgag
gcactcttccagctttccttcctgggcatggaatcctgtggcatccatgaaactaccttg
aactccattatgaagtgtgatgtggacatccacaaagacctttacgccaacacattgctg
tctggcggcaccaccatgtaccctagcgttgccaacaggatgcagaaggagatcaccgcc
ctggcgcccagcacgatgaagatcaagatcattgctcctcctgagctcaagcactctgtg
tggattggcggctccatcctggcctcgctgtccaccttccagcagatgtggatcagcaag
caggagtatgatgagtccggctccatcatccatccttcaaatgcttctaggcggactgtg
acttag

>gi568815589r:6648706_6848981|GENSCAN_predicted_peptide_3|41_aa
XGLIMHSALSTKWNSYSHLPTNLRNCYNINTETVEAALDDY

>gi568815589r:6648706_6848981|GENSCAN_predicted_CDS_3|126_bp
nacggcctgatcatgcattctgctttgtccaccaagtggaatagctatagtcacttgccc
acaaacctgagaaactgctacaatatcaacacggagactgtggaagcagccctggatgat
tactga