GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:05:20

Sequence gi568815593f:136053761_136277477 : 223717 bp : 43.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    183    320  138  1  0  110   87    62 0.974   8.74
 1.02 Intr +    956   1101  146  0  2   73  101    69 0.999   6.70
 1.03 Intr +   1920   2056  137  2  2  103   59   181 0.998  16.07
 1.04 Intr +   2905   3035  131  1  2   82   38   171 0.999  11.84
 1.05 Intr +   5330   5454  125  0  2   81  111   193 0.999  21.20
 1.06 Intr +   7074   7176  103  2  1  107  111   128 0.999  16.75
 1.07 Intr +   7740   7819   80  1  2  118   90    35 0.978   5.97
 1.08 Intr +   8903   8927   25  1  1  105   95     7 0.589   0.70
 1.09 Term +   9691   9812  122  2  2   49   41    91 0.503  -0.86
 1.10 PlyA +  10039  10044    6                               1.05

 2.06 PlyA -  10245  10240    6                               1.05
 2.05 Term -  15686  15538  149  0  2   98   48    36 0.598  -1.34
 2.04 Intr -  16346  16169  178  2  1  104    7   146 0.715   7.59
 2.03 Intr -  30567  30467  101  1  2  115   61     5 0.012   0.33
 2.02 Intr -  52229  52136   94  2  1   87   99    34 0.099   3.94
 2.01 Init -  85835  85707  129  2  0   83   64   108 0.216   8.05
 2.00 Prom -  90621  90582   40                              -5.86

 3.00 Prom +  92394  92433   40                              -2.96
 3.01 Init + 100010 100403  394  1  1   54   96   166 0.506  10.92
 3.02 Intr + 107096 107347  252  0  0  103  110    42 0.877   5.31
 3.03 Intr + 109512 109631  120  1  0   92   78     4 0.523   0.27
 3.04 Intr + 118674 118895  222  1  0  101   84    36 0.707   2.60
 3.05 Intr + 120616 120872  257  2  2  110  113    86 0.986  10.46
 3.06 Term + 122138 122200   63  1  0   96   42    41 0.872  -1.81
 3.07 PlyA + 122379 122384    6                               1.05

 4.07 PlyA - 122803 122798    6                               1.05
 4.06 Term - 131624 131534   91  1  1  104   38    86 0.652   2.39
 4.05 Intr - 133807 133755   53  1  2  101  103   -24 0.574  -1.89
 4.04 Intr - 137523 137329  195  0  0   49   41   152 0.439   6.21
 4.03 Intr - 138808 138459  350  2  2    6    6   625 0.877  41.18
 4.02 Intr - 139478 138877  602  1  2   74   69   262 0.713  15.06
 4.01 Init - 139863 139730  134  0  2   59   69   166 0.994   9.63
 4.00 Prom - 142358 142319   40                              -9.06

 5.00 Prom + 142418 142457   40                              -2.76
 5.01 Init + 144819 144890   72  2  0   41   93    59 0.225   0.82
 5.02 Intr + 147038 147161  124  1  1   62   94    77 0.294   5.86
 5.03 Intr + 149868 149993  126  1  0  107  109   -10 0.278   3.65
 5.04 Term + 151219 151286   68  2  2   95   49    44 0.169  -0.70
 5.05 PlyA + 158207 158212    6                              -0.45

 6.10 PlyA - 159005 159000    6                               1.05
 6.09 Term - 159844 159675  170  2  2  115   43   218 0.866  18.04
 6.08 Intr - 162515 162440   76  2  1   88   94    87 0.973   8.39
 6.07 Intr - 171594 171514   81  0  0   55   91    73 0.922   4.13
 6.06 Intr - 172495 172274  222  1  0  109  100    61 0.949   7.72
 6.05 Intr - 177789 177594  196  2  1   94   94   210 0.950  21.62
 6.04 Intr - 193975 193711  265  2  1   66   92   281 0.354  22.87
 6.03 Intr - 198122 197889  234  0  0  103  113   389 0.372  40.56
 6.02 Intr - 212676 212460  217  0  1   87   87    56 0.207   3.48
 6.01 Intr - 221077 220913  165  1  0   87   87    47 0.620   4.66

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:136053761_136277477|GENSCAN_predicted_peptide_1|335_aa
XKTLFELAAESDVSTAIDLFRQAGLGNHLSGSERLTLLAPLNSVFKDGTPPIDAHTRNLL
RNHIIKDQLASKYLYHGQTLETLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMD
RVLTPPMGTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRER
SRLLGDAKELANILKYHIGDEILVSGGIGALVRLKSLQGDKLEVSLKNNVVSVNKEPVAE
PDIMATNGVVHVITNVLQPPANRPQERGDELADSALEIFKQASAFSRASQRSVRLETWMS
LPDIHFQRGPIPNVELTAYAKSLEKELQYCGAHKT

>gi568815593f:136053761_136277477|GENSCAN_predicted_CDS_1|1008_bp
nccaagacactatttgaattggctgcagagtctgatgtgtccacagccattgaccttttc
agacaagccggcctcggcaatcatctctctggaagtgagcggttgaccctcctggctccc
ctgaattctgtattcaaagatggaacccctccaattgatgcccatacaaggaatttgctt
cggaaccacataattaaagaccagctggcctctaagtatctgtaccatggacagaccctg
gaaactctgggcggcaaaaaactgagagtttttgtttatcgtaatagcctctgcattgag
aacagctgcatcgcggcccacgacaagagggggaggtacgggaccctgttcacgatggac
cgggtgctgacccccccaatggggactgtcatggatgtcctgaagggagacaatcgcttt
agcatgctggtagctgccatccagtctgcaggactgacggagaccctcaaccgggaagga
gtctacacagtctttgctcccacaaatgaagccttccgagccctgccaccaagagaacgg
agcagactcttgggagatgccaaggaacttgccaacatcctgaaataccacattggtgat
gaaatcctggttagcggaggcatcggggccctggtgcggctaaagtctctccaaggtgac
aagctggaagtcagcttgaaaaacaatgtggtgagtgtcaacaaggagcctgttgccgag
cctgacatcatggccacaaatggcgtggtccatgtcatcaccaatgttctgcagcctcca
gccaacagacctcaggaaagaggggatgaacttgcagactctgcgcttgagatcttcaaa
caagcatcagcgttttccagggcttcccagaggtctgtgcgactagaaacttggatgtca
ctgcctgacattcacttccagagaggacctatcccaaatgtggaattgactgcctatgcc
aagtccctggaaaaggagcttcagtattgtggggctcataaaacatga

>gi568815593f:136053761_136277477|GENSCAN_predicted_peptide_2|216_aa
MTMAYNQGDSSGVVSSRHMKDSKLPDEGDHGVYENKGVNNDSKVRKLGHREGQKLAPSYT
SGISGMMIYTSEDRAQLPERFEHAHCVPCPIHYSAIKKLTLSLTTPAKPRVSPLISPENA
LAVVPDDMHMAKPIGHINNSSELMLVLKRLSFLNFQDSIHILSDPFAVPPPWSSIMSCLD
DCNGLLIGFPAATPTLHFNPLSTQKPKQSFKNIFNN

>gi568815593f:136053761_136277477|GENSCAN_predicted_CDS_2|651_bp
atgacgatggcttacaaccagggtgatagcagtggggtggtgagcagcagacatatgaaa
gacagtaagcttcctgatgaaggagatcatggggtgtatgagaacaaaggagttaacaat
gattccaaggtgaggaaactggggcacagagaggggcagaaacttgccccaagctacaca
tctgggattagtggaatgatgatttacaccagtgaagacagagcccaacttccagaaaga
tttgaacatgcacactgtgtcccatgtcccattcattactcagccatcaaaaagctgact
ctcagtctcaccactcctgccaagcccagagtcagtcctctcatctcccccgagaatgct
cttgccgtggttcctgatgacatgcacatggctaaacccatcggacacatcaataattca
tctgagttgatgcttgtccttaaaaggctatccttcctcaacttccaggattccatacac
atattatcagacccctttgcagtgccaccaccctggtcctccatcatgtcttgcctggat
gactgtaacggcctcctaattggcttcccagctgctactcctaccctccacttcaaccca
ctttccacacaaaaaccaaaacaatcatttaaaaacatatttaacaattaa

>gi568815593f:136053761_136277477|GENSCAN_predicted_peptide_3|435_aa
MASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPS
KCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKEVCI
NPYHYKRVESPVLPPVLVPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFPDSFHQPNNT
PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDNSQPMDT
SNNMIPQIMPSISSRDVQPVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPS
NNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNFH
HGFHPTTVCKIPSSCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKFSWAK
TTISSKPENLINPGK

>gi568815593f:136053761_136277477|GENSCAN_predicted_CDS_3|1308_bp
atggccagcttgttttcttttactagtccagcagtaaagcgattgttgggctggaaacaa
ggtgatgaggaggagaaatgggcagaaaaggcagttgatgctttggtgaagaaactaaaa
aagaaaaagggtgccatggaggaactggagaaagccttgagcagtccaggacagccgagt
aaatgtgtcactattcccagatctttagatggacgcctgcaggtttctcacagaaaaggc
ttaccccatgttatatattgtcgtgtttggcgctggccggatttgcagagtcatcatgag
ctaaagccgttggatatttgtgaatttccttttggatctaagcaaaaagaagtttgtatc
aacccataccactataagagagtggagagtccagtcttacctccagtattagtgcctcgt
cataatgaattcaatccacaacacagccttctggttcagtttaggaacctgagccacaat
gaaccacacatgccacaaaatgccacgtttccagattctttccaccagcccaacaacact
ccttttcccttatctccaaacagcccttatcccccttctcctgctagcagcacatatccc
aactccccagcaagttctggaccaggaagtccatttcagctcccagctgatacgcctcct
cctgcctatatgccacctgatgatcagatgggtcaagataattcccagcctatggataca
agcaataatatgattcctcagattatgcccagtatatccagcagggatgttcagcctgtt
gcctatgaagagcctaaacattggtgttcaatagtctactatgaattaaacaatcgtgtt
ggagaagcttttcatgcatcttctactagtgtgttagtagatggattcacagatccttca
aataacaaaagtagattctgcttgggtttgttgtcaaatgttaatcgtaattcgacaatt
gaaaacactaggcgacatattggaaaaggtgttcatctgtactatgttggtggagaggtg
tatgcggaatgcctcagtgacagcagcatatttgtacagagtaggaactgcaactttcat
catggctttcatcccaccactgtctgtaagattcccagcagctgcagcctcaaaattttt
aacaatcaggagtttgctcagcttctggctcaatctgtcaaccatgggtttgaggcagta
tatgagctcaccaaaatgtgtaccattcggatgagttttgtcaagttttcctgggccaag
actaccataagcagtaaaccagagaacctgataaatccaggaaaataa

>gi568815593f:136053761_136277477|GENSCAN_predicted_peptide_4|474_aa
MLVWERVCTPLEVVCPACATQQPVGTRNKPGHAWREPVKEDNERSRSPGQPPPVPPLPRT
PARDTSALRAARKLSLLLKTGAQQPEGVGTSSLNTGRLDRDQSLQDCSETLRWRRRRRTR
RTPWPPALRALCHRALSRDPGLRLHLLSASPRRRSPEAPSTWSSLELRVRAERAVVKPKG
ESVTGTSVLVATERNSEPEGRGHRTVQLRELGSASRRGKQLSAEASERTRPGVFAVPAGP
KAPTLGQVKRSGWGRRDPRAMYGDIFNATGGPEAAVGSALAPGATVKAEGALPLELATAR
GMRDGAATKPDLPTYLLLFFLLLLSVALVVLFIGCQLRHSAFAALPHDRSLRDARAPWKT
RPDGLQGKLLPDLLNKFPLTGLLGTLSAGQFLPPGIFPFALSFPGPEAPEEPYLDQNRLV
KEEPEDQLLNNCIISSPMLLPTSNMFYKQQFQEFDNFGAKVQKFKEKGYECFLS

>gi568815593f:136053761_136277477|GENSCAN_predicted_CDS_4|1425_bp
atgcttgtctgggagcgcgtctgcacacccttggaggtggtgtgcccggcctgcgctacc
cagcagccagtgggcactcggaacaaaccaggccatgcctggagggagcctgtcaaggag
gataatgaacgcagccgctcccccgggcagccgccgccagtcccgcccctcccccgaacc
cccgcccgggacacgagcgcgctcagagccgccagaaagctcagtctcctgctcaaaaca
ggagcgcagcagccggagggagtggggacaagctcgctgaacactgggcgtctcgacagg
gaccagagcctgcaggactgttccgagacgctgcggtggcggcggcgccggaggacgcgg
aggactccctggccacccgccctccgtgcgctctgccaccgggcgctcagcagagacccc
gggctgcggctgcacttgctgagtgcctctccccgccgccgcagcccagaggcgcccagc
acctggagctcactggagctgagggtccgagctgagcgggctgttgtaaagccgaaaggc
gagtcagtgactgggacctctgtcctggtggcgacggagagaaacagtgagcccgagggg
cgcgggcacagaactgtccagctccgagaactggggtccgccagccggcggggaaagcag
ctgagcgcggaggcgagtgagcggacgcgtcccggggtctttgcagtccccgccggcccc
aaggcaccgactctcggccaagtgaagcggtccggctggggtcggcgggacccgcgggcc
atgtacggcgacatattcaacgccacgggcggccccgaggcggcggtaggcagcgcgctg
gccccaggagccacggtcaaggcagaaggcgctttgccgctggagctggccactgcgcgc
ggtatgagggacggcgcggccacaaagcccgacctgcccacctacctgctgctcttcttc
ctgctgctgctctcggtggcgctcgtcgtcctcttcatcggttgccagctgcgccattcg
gccttcgccgcgctgccccacgaccgctcgctgcgcgacgcccgcgcgccctggaagacg
cggccggatggtctccagggaaaattgctgcctgacctgctgaataaattcccattaaca
gggctcctggggaccctttctgcagggcagttccttccacctggcatcttcccttttgct
ctgagctttcctgggcctgaagcccctgaagagccctatctggaccagaaccgtctggtg
aaggaagagcctgaagatcagctactaaataactgcataattagtagcccaatgcttctt
cccactagtaacatgttctacaagcaacaattccaagaatttgataactttggagcaaaa
gtccaaaagttcaaagagaaaggatatgagtgctttcttagctga

>gi568815593f:136053761_136277477|GENSCAN_predicted_peptide_5|129_aa
MKLVALLPLLAKHGVVFPLLRLGLEAAFELPVDGRSRLDGLESSGPFLEKAFKMTLLPEV
VLGFTKPAGMKWDEALSAPLWGSNGSAPWKPAVLGRFSPSALCCLTSVKLQTPELESTGS
FQLIAHYDT

>gi568815593f:136053761_136277477|GENSCAN_predicted_CDS_5|390_bp
atgaagctggtggcactgttgcccttgctagccaagcatggagtcgtctttcctctgctg
aggttggggctggaggctgcttttgagctgcctgtggatgggagaagtagactggatggc
ttggagtcatctggccccttcttggagaaagcctttaagatgacactcctcccagaagtg
gtgctgggcttcactaaacctgctggcatgaagtgggatgaggccctgtccgccccactc
tggggctctaatggcagcgcaccctggaagcctgctgtcctaggcaggttttccccctca
gcgctctgctgtctgacatcagtgaaactgcaaactcctgagttggagtccactggatcc
ttccagctcatcgcacattacgatacatga

>gi568815593f:136053761_136277477|GENSCAN_predicted_peptide_6|541_aa
FVAHPNCQQQLLTMWYENLSGLRQQSIAVKFLAVFGVSIGLPFLAIAYWIAPCSKLGRTL
RSPFMKFVAHAVSFTIFLGLLVVNASDRFEGVKTLPNETFTDYPKQIFRVKTTQFSWTEM
LIMKWVLGMIWSECKEIWEEGPREYVLHLWNLLDFGMLSIFVASFTARFMAFLKATEAQL
YVDQHVQDDTLHNVSLPPEVAYFTYARDKWWPSDPQIISEGLYAIAVVLSFSRIAYILPA
NESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYRGAKYNPAFTTVEESFK
TLFWSIFGLSEVISVVLKYDHKFIENIGYVLYGVYNVTMVVVLLNMLIAMINNSYQEIEE
DADVEWKFARAKLWLSYFDEGRTLPAPFNLVPSPKSFYYLIMRIKMCLIKLCKSKAKSCE
NDLEMGMLNSKFKKTRYQAGMRNSENLTANNTLSKPTRYQKIMKRLIKRYVLKAQVDREN
DEVNEGELKEIKQDISSLRYELLEEKSQATGELADLIQQLSEKFGKNLNKDHLRVNKGKD
I

>gi568815593f:136053761_136277477|GENSCAN_predicted_CDS_6|1626_bp
ttcgttgctcatcctaactgtcagcagcaattgcttaccatgtggtatgaaaatctctca
ggcttacgtcaacagtctatcgctgtgaaattcctggctgtctttggagtctccataggc
ctcccttttctcgccatagcctattggattgctccgtgcagcaagctaggacgaaccctg
aggagccctttcatgaagtttgtagctcatgcagtttcttttacaatcttcttgggatta
ttagttgtgaatgcatctgaccgatttgaaggtgttaaaaccctgccaaacgaaaccttc
acagactacccaaaacaaatcttcagagtgaaaaccacacagttctcctggacagaaatg
ctcattatgaagtgggtcttaggaatgatttggtccgaatgcaaggaaatctgggaggag
gggccacgggagtacgtgctgcacttgtggaacctgctagatttcgggatgctgtccatc
ttcgtggcctccttcacagcacgcttcatggccttcctgaaggccacggaggcacagctg
tacgtggaccagcacgtgcaggacgacacgctgcacaatgtctcgcttccgccggaagtg
gcatacttcacctacgccagggacaagtggtggccttcagaccctcagatcatatcggaa
gggctctacgcgatagccgtcgtgctgagcttctctcgcattgcatacattctgccagcc
aacgagagttttgggcccctgcagatctcgctagggagaactgtgaaagatatcttcaag
ttcatggtcattttcatcatggtatttgtggccttcatgattgggatgttcaacctgtac
tcttactaccgaggtgccaaatacaacccagcgtttacaacggttgaagaaagttttaaa
actttgttttggtccatattcggcttatctgaagtaatctcagtggtgctgaaatacgac
cacaaattcatcgagaacattggctacgttctctacggcgtttataacgtcaccatggtg
gtagtgttgctcaacatgctaatagccatgataaacaactcctatcaggaaattgaggag
gatgcagatgtggaatggaagttcgcccgagcaaaactctggctgtcttactttgatgaa
ggaagaactctacctgctccttttaatctagtgccaagtcctaaatcattttattatctc
ataatgagaatcaagatgtgcctcataaaactctgcaaatctaaggccaaaagctgtgaa
aatgaccttgaaatgggcatgctgaattccaaattcaagaagactcgctaccaggctggc
atgaggaattctgaaaatctgacagcaaataacactttgagcaagcccaccagataccag
aaaatcatgaaacggctcataaaaagatacgtcctgaaagcccaggtggacagagaaaat
gacgaagtcaatgaaggcgagctgaaggaaatcaagcaagatatctccagcctgcgctat
gagcttcttgaggaaaaatctcaagctactggtgagctggcagacctgattcaacaactc
agcgagaagtttggaaagaacttaaacaaagaccacctgagggtgaacaagggcaaagac
atttag