GENSCAN 1.0	Date run:  3-Nov-116	Time: 08:30:23

Sequence gi568815590f:117047030_117272678 : 225649 bp : 38.33% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    381    521  141  2  0   51  110    57 0.760   3.83
 1.02 Term +   6406   6558  153  0  0   75   41   120 0.740   2.94
 1.03 PlyA +   7721   7726    6                               1.05

 2.00 Prom +  14430  14469   40                              -4.55
 2.01 Init +  41414  41456   43  1  1   90   88    46 0.512   5.43
 2.02 Intr +  41683  41818  136  2  1   60   74    68 0.422   1.31
 2.03 Intr +  46772  46848   77  2  2   82   73    73 0.549   3.44
 2.04 Intr +  47201  47352  152  0  2   68    5   128 0.269   1.46
 2.05 Intr +  47553  47786  234  2  0   35  109   152 0.547   8.96
 2.06 Intr +  48157  48271  115  0  1   48   18    76 0.055  -4.30
 2.07 Intr +  53482  53580   99  2  0   72   53    71 0.151   1.16
 2.08 Intr +  54650  54873  224  0  2   28   67   152 0.488   4.02
 2.09 Term +  61997  62200  204  1  0   70   42   163 0.578   6.29
 2.10 PlyA +  63076  63081    6                               1.05

 3.03 PlyA -  64192  64187    6                               1.05
 3.02 Term -  64902  64603  300  0  0   70   48   148 0.587   3.24
 3.01 Init -  70417  70352   66  1  0   73   49    70 0.478   2.72
 3.00 Prom -  71859  71820   40                              -6.45

 4.00 Prom +  72770  72809   40                              -5.25
 4.01 Init +  85071  85141   71  2  2   62   87    40 0.864   1.87
 4.02 Intr +  86727  86894  168  0  0  109   52   100 0.631   6.64
 4.03 Intr +  99925 100124  200  1  2   44   92   116 0.184   5.67
 4.04 Intr + 105915 106061  147  1  0   94   96   104 0.990  11.09
 4.05 Intr + 110662 110815  154  2  1   50   75   196 0.994  12.71
 4.06 Intr + 114709 114859  151  1  1  103  113    90 0.998  12.24
 4.07 Intr + 116396 116501  106  1  1  108   97    12 0.958   2.97
 4.08 Intr + 124005 124139  135  1  0  108   82    26 0.788   3.62
 4.09 Term + 125507 125652  146  0  2   73   36   172 0.739   7.59
 4.10 PlyA + 126092 126097    6                               1.05

 5.00 Prom + 134505 134544   40                              -3.65
 5.01 Init + 135624 135813  190  2  1   76  115   103 0.946  11.02
 5.02 Term + 139924 140126  203  2  2   17   43   104 0.363  -4.63
 5.03 PlyA + 140180 140185    6                               1.05

 6.00 Prom + 142238 142277   40                              -5.85
 6.01 Init + 145790 146141  352  1  1   71   77   215 0.295  16.07
 6.02 Term + 147722 148365  644  0  2   35   43   391 0.341  22.64
 6.03 PlyA + 148553 148558    6                               1.05

 7.06 PlyA - 150096 150091    6                               1.05
 7.05 Term - 152265 152140  126  0  0   31   44   125 0.175  -0.30
 7.04 Intr - 162539 162450   90  2  0   49   88    99 0.480   5.27
 7.03 Intr - 168467 168330  138  2  0   40   76   101 0.492   3.84
 7.02 Intr - 170528 170489   40  1  1  115  100    12 0.341   2.41
 7.01 Init - 175005 174914   92  0  2   83   19    86 0.325   1.21
 7.00 Prom - 175872 175833   40                              -4.65

 8.00 Prom + 183536 183575   40                              -3.45
 8.01 Init + 188568 188615   48  2  0   83  110    35 0.441   6.20
 8.02 Intr + 192911 192959   49  1  1  103   81    22 0.098   0.33
 8.03 Intr + 195781 195888  108  2  0   61  119    29 0.055   2.64
 8.04 Intr + 198147 198330  184  1  1  -72   54   226 0.023   1.12
 8.05 Term + 207444 207639  196  0  1   54   49    96 0.047  -1.80
 8.06 PlyA + 207700 207705    6                               1.05

 9.03 PlyA - 208233 208228    6                               1.05
 9.02 Term - 209382 208874  509  1  2   81   50   165 0.297   5.58
 9.01 Init - 211811 211721   91  2  1   70  107    24 0.302   3.20
 9.00 Prom - 213699 213660   40                              -1.85

10.04 PlyA - 214514 214509    6                               1.05
10.03 Term - 215535 215396  140  1  2   49   41   132 0.595   1.74
10.02 Intr - 215843 215706  138  0  0   58   16   108 0.307   0.11
10.01 Init - 216537 216468   70  0  1   83   51    83 0.662   5.36
10.00 Prom - 218641 218602   40                              -6.95

11.03 PlyA - 219252 219247    6                               1.05
11.02 Term - 220429 220231  199  0  1   36   42   149 0.756   0.99
11.01 Init - 220830 220568  263  0  2   77   75   175 0.647  11.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:117047030_117272678|GENSCAN_predicted_peptide_1|97_aa
REWNINNICKNAFESDLVQEVQRLITPLRIIIEYSFKVTDINSQVQQMVQTENRGRVAQI
HILGCICMDGRTISWMSEPEPEPQPSYYRNVYYNSLY

>gi568815590f:117047030_117272678|GENSCAN_predicted_CDS_1|294_bp
agggaatggaatataaataatatttgcaaaaatgcttttgagtctgacctggtccaggag
gttcagaggctgataactcctctgaggattattattgagtacagtttcaaggtgactgac
atcaactcccaagtccaacagatggtgcagacggaaaacagaggccgtgttgctcagatc
catatcctgggatgcatctgtatggatggaagaaccatttcctggatgtctgagcccgag
cccgagccccagcccagctattataggaatgtctattataatagtctttattag

>gi568815590f:117047030_117272678|GENSCAN_predicted_peptide_2|427_aa
MHINNPNTCRELLLRNTHVFPSTPCARRPYDFTDGDGILLSPDVGGRACIWLTVLDDVGW
LCLARATDLNPMPAKGKPGAKWQGVSLLAPPFGRSRVLVLCPGRMKYTDKWRVSKVKRSF
IEQQLRGEQLRGDPQWRGISVCQLVHEWPWVGLEKAPQVPTPVCGTSSLAPRLQALPGLK
VGLYLGPVPFHPGACLPPAVIHGVQAVHAMGHLQSPGCTSPTVASVIAAAALDGPLLSSI
LVGFIHSMVCSTRHAWVLLEQAMEYWFVLETRSQYGYWRHLQVFYSGHNLISCQCGQNKS
RQKNVERLDWFSLLAYIFLPCWMLPTLEYRTSSSSALGFRLTSLLFSLQMAYCGTSPCDR
PGKLTEKEGVLTDGSSKSHEVEFYWIDLHHIPVTGPITVARGIGHTDWPGLCHAPSLEGS
MCWDSPV

>gi568815590f:117047030_117272678|GENSCAN_predicted_CDS_2|1284_bp
atgcacattaataacccaaatacctgccgagagctgctacttcgtaatacacatgttttt
ccaagtaccccgtgtgcacgtagaccctatgatttcacagatggtgatgggatactgttg
agtccagatgttggaggcagagcttgtatttggctgactgtattagatgacgttggttgg
ctgtgcttggctcgtgctactgacctgaatcccatgcctgccaagggaaaaccaggtgca
aagtggcaaggggtatctcttttagccccaccatttggcaggtcccgagttcttgtcctg
tgtccaggaagaatgaagtacacagacaagtggagggtgagcaaggtgaagaggagtttt
attgagcagcagctcagaggagaacagctcagaggagacccgcagtggaggggaataagt
gtgtgccagttggtccatgagtggccatgggtgggcctggaaaaagcaccgcaagttccc
actcctgtttgtgggaccagcagcctggcccccaggcttcaggctctccctggcttgaag
gtggggctttacctgggacccgtccctttccacccaggagcctgtctgcctcctgctgtc
attcatggcgtccaggctgttcatgccatggggcacctgcagagccctggctgtacctct
ccgactgtagccagtgtcatagcagcagctgctctagatgggccgctgctgtcatcaata
ctagtcggttttattcactcaatggtttgttctactaggcatgcatgggtgctcttagag
caggcaatggagtactggtttgtgctggaaacaagaagccagtatggctactggaggcac
ttgcaggtcttctacagtgggcacaatctaatcagctgccagtgtggccagaataaaagc
aggcagaagaatgtggaaagactagactggtttagtcttctggcctacatctttctcccc
tgctggatgcttcctacccttgaatatcggacttcaagttcttcagctttgggatttaga
ctgacttccttgcttttcagcttgcagatggcctattgcgggacctcaccttgtgatcgt
cctggaaaactcacagaaaaagaaggcgtcttgactgatggttccagtaaaagtcacgag
gttgagttttactggattgatctgcatcatatacccgtaactggaccaatcacagtggcc
agagggattggacacactgattggccaggcctgtgtcatgcacctagccttgaaggcagc
atgtgttgggacagccccgtgtaa

>gi568815590f:117047030_117272678|GENSCAN_predicted_peptide_3|121_aa
MSLVINKSDPLGPDSVAEALTETFPDIKQGGHFENQKLSIYKEEEKMPQPGAELVLCTVT
SNHVIGELVSHYLSAVASSRSTSWHQKDAPFGAARWPPAPQTYIVVALQRQWKDSASLPL
V

>gi568815590f:117047030_117272678|GENSCAN_predicted_CDS_3|366_bp
atgagtttagtaattaataaatcggatcctctgggacctgactctgtggctgaagctctt
actgagacatttccagatattaaacaaggaggacattttgagaatcaaaaactgtccatt
tataaagaggaagaaaaaatgcctcaaccaggagcagagctggttttatgcacagttacc
tcaaaccatgtaattggggagttagtttcccactatctctcagctgtggcttcctccagg
tcgacttcatggcatcaaaaagatgctccctttggggcagcaagatggcctccagcccct
cagacctatattgtagtagctttgcagcgccagtggaaagacagtgcctctttaccacta
gtttga

>gi568815590f:117047030_117272678|GENSCAN_predicted_peptide_4|425_aa
MVACTHWQHEVFLKYEFKYGEHKLITDYFVRLRVRIYEKKYIGFYSANSRPRISMPSLAR
KRLPQSLLEAPNCVSKVKDHVELQQKPVNKDQCPRERPEELESGGMYHCHSGSKPTEKGA
NEYAYAKWKLCSASAICFIFMIAEVVGGHIAGSLAVVTDAAHLLIDLTSFLLSLFSLWLS
SKPPSKRLTFGWHRAEILGALLSILCIWVVTGVLVYLACERLLYPDYQIQATVMIIVSSC
AVAANIVLTVVLHQRCLGHNHKEVQANASVRAAFVHALGDLFQSISVLISALIIYFKPEY
KIADPICTFIFSILVLASTITILKDFSILLMEGVPKSLNYSGVKELILAVDGVLSVHSLH
IWSLTMNQVILSAHVATAASRDSQVVRREIAKALSKSFTMHSLTIQMESPVDQDPDCLFC
EDPCD

>gi568815590f:117047030_117272678|GENSCAN_predicted_CDS_4|1278_bp
atggttgcatgcacacattggcaacatgaagtatttctgaaatacgagtttaaatatggg
gaacacaaattaataactgattactttgtaaggttaagagtaagaatatacgagaaaaaa
tacattggtttttattctgctaacagtagacccaggatttcaatgccttcacttgcaagg
aaaaggctcccccagagcctcttagaggctccaaactgtgtgagcaaagttaaggatcat
gtggaactccaacagaaaccggtgaataaagatcagtgtcccagagagagaccagaggag
ctggagtcaggaggcatgtaccactgccacagtggctccaagcccacagaaaagggggcg
aatgagtacgcctatgccaagtggaaactctgttctgcttcagcaatatgcttcattttc
atgattgcagaggtcgtgggtgggcacattgctgggagtcttgctgttgtcacagatgct
gcccacctcttaattgacctgaccagtttcctgctcagtctcttctccctgtggttgtca
tcgaagcctccctctaagcggctgacatttggatggcaccgagcagagatccttggtgcc
ctgctctccatcctgtgcatctgggtggtgactggcgtgctagtgtacctggcatgtgag
cgcctgctgtatcctgattaccagatccaggcgactgtgatgatcatcgtttccagctgc
gcagtggcggccaacattgtactaactgtggttttgcaccagagatgccttggccacaat
cacaaggaagtacaagccaatgccagcgtcagagctgcttttgtgcatgcccttggagat
ctatttcagagtatcagtgtgctaattagtgcacttattatctactttaagccagagtat
aaaatagccgacccaatctgcacattcatcttttccatcctggtcttggccagcaccatc
actatcttaaaggacttctccatcttactcatggaaggtgtgccaaagagcctgaattac
agtggtgtgaaagagcttattttagcagtcgacggggtgctgtctgtgcacagcctgcac
atctggtctctaacaatgaatcaagtaattctctcagctcatgttgctacagcagccagc
cgggacagccaagtggttcggagagaaattgctaaagcccttagcaaaagctttacgatg
cactcactcaccattcagatggaatctccagttgaccaggaccccgactgccttttctgt
gaagacccctgtgactag

>gi568815590f:117047030_117272678|GENSCAN_predicted_peptide_5|130_aa
MQSGGGKGKIAWTEAPGRKNLAALRKRKEADVLSVVNKAGGRGVIWAGLGKSPVGHEKEL
EFYGQGTADSLAVFLSGRDRAKSLRMPEWVEFTGHSTRGERDIQRERERERERERARDLQ
EDFLKSSAEE

>gi568815590f:117047030_117272678|GENSCAN_predicted_CDS_5|393_bp
atgcaaagtggaggaggaaaaggaaagatagcttggacagaggccccaggtaggaagaac
ctggcagccttgagaaaaagaaaggaagcagatgtactgagtgtagtgaacaaggctggg
ggaagaggggtgatctgggctggactgggcaaaagccctgtaggccatgagaaggagcta
gaattttatgggcagggaactgcagacagtctggcagtcttcctgagtgggagagataga
gctaagagtctgaggatgcccgagtgggtagagttcacaggacatagtactagaggtgag
agagatatacagagagagagagagagagagagagagagagagagagccagagatcttcag
gaagacttcctcaagtcctcagctgaggagtga

>gi568815590f:117047030_117272678|GENSCAN_predicted_peptide_6|331_aa
MEDETNEMKHEEKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTLQD
IIQENFPNLARQANIQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKEIQ
TTIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTK
KSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILISKPSRDTTKKE
KFRPISLMNIDAKILNKILAKRIQQHIKKLIHHDQVGFIPGMQGWFNIHKSINVIQHINR
TKSKNHMIISIDAENDFDKIQQPFMLKLSIN

>gi568815590f:117047030_117272678|GENSCAN_predicted_CDS_6|996_bp
atggaagacgaaacaaatgaaatgaagcatgaagagaagtttagagaaaaaagaataaaa
agaaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgactg
attggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacattcaaattcaggaaata
cagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaagaaatacaa
actaccatcagagaatactacaaacacctctatgcaaataaactagaaaatctagaagaa
atggataaattcctcgacacatacaccctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggctctgaaattgtggcaataatcaatagcttaccaacgaaa
aagagtccaggaccagatggattcacagccgaattctaccagagatacaaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcatcctgatatcaaagccaagcagagacacaaccaaaaaagag
aagtttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaacgaatccagcagcacatcaaaaagcttatccaccatgaccaagtgggcttcatccct
gggatgcaaggctggttcaatatacacaaatcaataaatgtaatccagcatataaacaga
accaaaagcaaaaaccacatgattatctcaatagatgcagaaaacgactttgacaaaatt
caacaacccttcatgctaaaactctcaataaattag

>gi568815590f:117047030_117272678|GENSCAN_predicted_peptide_7|161_aa
MAEGKGGKGTSYMAAGKTVCAGELPFIKTIRKSRNRQTIKFGAKLSTKLVKAGTFKWTRK
PWAKILGFASWKESPDAMKLKDPCSSSLDYDQLGNFSNRFLEEDAANENLQQLPEGQYTQ
EESKNLRRREIEYVKFLKKKVGTSDTWECGWSMNRGKQERC

>gi568815590f:117047030_117272678|GENSCAN_predicted_CDS_7|486_bp
atggcagaaggcaaaggaggcaaaggcacatcttacatggcagcaggcaagaccgtgtgt
gcaggggaactgccctttataaaaaccatcagaaaatcaagaaataggcagacaattaaa
tttggagctaagcttagcaccaagttggtgaaagcaggtacatttaaatggactaggaag
ccctgggcaaagatcttgggctttgcttcctggaaggaaagccctgatgccatgaagctg
aaggacccctgctcaagttcactggattacgatcaacttgggaatttttcaaatagattc
ttagaggaggatgctgccaatgaaaatttacaacaactccccgaaggtcagtacacacag
gaagaaagtaagaatcttcgaaggagagaaatagaatatgtgaagttcctgaagaagaaa
gttgggacttctgatacatgggaatgtggctggagtatgaacagagggaagcaagagcgg
tgttag

>gi568815590f:117047030_117272678|GENSCAN_predicted_peptide_8|194_aa
MAEAKGGAKSRLTWWQINLLNSVSGSSLFIVPIFSSVRWRLIITVPISEGVVMRIKTTCE
SVYPTSVPVNSQEEAANQMNKCEVKMPTPVKTQPKLAKANGENAGSISELFLEMESNYIN
AFRQRETDGRQYDFTAKNPEDSTKRLLELINDFSKVLEYKINVQKPVAFLYINNVQAESQ
IKKEISFKIATKST

>gi568815590f:117047030_117272678|GENSCAN_predicted_CDS_8|585_bp
atggcagaagccaaaggaggagcaaagtcacgtcttacatggtggcagataaacctgctc
aattccgtgtctggttctagtttattcattgtgcccattttctcatctgtaagatggaga
ctgataataacggtaccaatatcagagggcgttgtgatgaggattaagacaacctgtgaa
agtgtttaccccacatctgtacctgttaattcgcaagaggaagctgctaatcaaatgaac
aagtgtgaagtgaaaatgccaaccccagtgaagacgcagccaaagctggcaaaggcaaat
ggagaaaacgcaggcagcatcagtgagctgttcctggaaatggagtctaactacattaac
gcattcagacagagggaaacagatggtcgacaatatgattttacagctaaaaaccctgaa
gactccaccaaaaggctcctggaacttataaatgacttcagtaaagttttagaatacaaa
atcaatgtacaaaaaccagtggcatttctatatatcaataatgttcaagctgagagtcaa
atcaagaaagaaatctcatttaaaatagccacaaaaagtacctag

>gi568815590f:117047030_117272678|GENSCAN_predicted_peptide_9|199_aa
MYARAQAHLLEVKNGVPTGGLFSVLFMSLTGFLFTLMIVSFAVQMLFSLISKKNKAGGIM
LPDFKLYYKATVTKTAQYWYQNRYIGPWNGTEAAEIMPHIYNHLIFDKPDKNKQWGKDSL
FNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKGLNVRPKTIKTLEENLGNTIQDLGMG
KDFMTKIPKAMSTQAKIDK

>gi568815590f:117047030_117272678|GENSCAN_predicted_CDS_9|600_bp
atgtacgcacgtgcacaggcacatttgctagaggtgaaaaatggagtacccactgggggt
cttttctcagttcttttcatgagtctgactggtttcctgttcactctgatgatagtttct
tttgctgtgcagatgctctttagtttaattagcaaaaagaacaaagctggaggcatcatg
ctacctgacttcaaactatactacaaggctacagtaaccaaaacagcacagtactggtac
caaaacagatatataggcccatggaatggaacagaggccgcagaaataatgccacacatc
tacaaccatctgatctttgacaaacctgacaaaaacaagcaatgggggaaggattcccta
tttaataaatggtgttgggaaaactggctagccatatgcagaaaactgaaactggacccc
ttccttacaccttatacaaaaattaactcaagatggattaaaggcttaaacgtaagacct
aaaaccataaaaaccctggaagaaaacctaggcaataccattcaggacttaggcatgggc
aaggacttcatgactaaaataccaaaagcaatgtcaacacaagctaaaattgacaaatga

>gi568815590f:117047030_117272678|GENSCAN_predicted_peptide_10|115_aa
MAEGKEEQVTSYMDGSRQRENEEDVKSNDPLQERFLLAPVHFHSPRRTSQYGKKNMGFGI
RQSQFPILAGLENIKLSKTNLALREPDEVLSADVMTVLSRVVSGINTDRKLQFIV

>gi568815590f:117047030_117272678|GENSCAN_predicted_CDS_10|348_bp
atggcagaaggcaaggaggagcaagtcacatcttacatggatggcagcaggcaaagagag
aatgaggaagatgttaaatccaatgacccacttcaggaacgtttcctccttgctccagtc
cacttccacagccccagacgtacttcacaatatggcaaaaagaacatgggttttggcatt
agacagagccagtttccaatcttagcaggccttgaaaatataaagctaagtaagacaaat
ttggccttgagagagccggatgaagttctaagtgccgatgtcatgacagtcctgtcccgt
gtggttagtggaatcaacactgataggaagttacaatttatagtgtga

>gi568815590f:117047030_117272678|GENSCAN_predicted_peptide_11|153_aa
MVSCDPAAPAVAVAKRGQGTARAMASEGASSKPWWLPHCTGHMGVQKTRAELWEPLPSIQ
RMYENAWMSRQKSALGEEPSWRTTTTARKASSTQHQPMKAAAGAEPRRYTASELLKALGA
NPLHHHALDVRSGVKEGYFGALRLTECLASFQS

>gi568815590f:117047030_117272678|GENSCAN_predicted_CDS_11|462_bp
atggtgtcctgtgacccagctgctccagctgtagctgtggctaaaaggggccaaggtaca
gctcgggccatggcttcagagggtgcaagctccaagccttggtggcttccacattgtacg
ggtcatatgggtgtgcagaagacaagagctgagctttgggagcctctgcctagcattcag
agaatgtatgaaaatgcctggatgtccaggcagaagtctgctttaggggaggaaccctca
tggagaaccactactacggcaagaaaagcctcaagcactcaacaccagcccatgaaagca
gctgctggagctgaaccccgcagatacacagcgtcagagcttctgaaggccttgggagcc
aaccccttgcatcaccatgccctggatgtgagatctggagtcaaggaaggttattttgga
gctttaagacttactgagtgccttgccagctttcagagttga