GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:48:27

Sequence gi568815594f:185043373_185246968 : 203596 bp : 42.23% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    215    210    6                               1.05
 1.05 Term -   3144   2735  410  1  2   24   35   272 0.292   9.89
 1.04 Intr -   4027   3845  183  2  0   81   -1   152 0.549   4.44
 1.03 Intr -   6296   5565  732  0  0   77   40   258 0.310  10.38
 1.02 Intr -   7379   6665  715  2  1   47   74   519 0.897  36.48
 1.01 Init -   7676   7440  237  2  0   72    2   310 0.851  18.86
 1.00 Prom -   7985   7946   40                              -7.05

 2.00 Prom +   9269   9308   40                              -9.15
 2.01 Init +  10231  10592  362  0  2   72   -7   101 0.073  -4.33
 2.02 Intr +  14701  14861  161  1  2   94   44   112 0.550   6.11
 2.03 Intr +  19876  19962   87  2  0  115   75   110 0.837  11.42
 2.04 Term +  28196  28311  116  0  2  114   33   111 0.621   5.95
 2.05 PlyA +  28824  28829    6                               1.05

 3.08 PlyA -  29844  29839    6                               1.05
 3.07 Term -  37809  37676  134  1  2   85   41    50 0.175  -2.73
 3.06 Intr -  42820  42730   91  1  1   72   55   109 0.428   4.65
 3.05 Intr -  50721  50611  111  0  0   76   26    88 0.042   1.06
 3.04 Intr -  68207  68038  170  0  2   61   23   151 0.040   4.64
 3.03 Intr -  77420  77312  109  2  1   53   82    53 0.032   0.14
 3.02 Intr -  83766  83621  146  1  2   -1   92   128 0.285   3.38
 3.01 Init -  83882  83807   76  2  1   96   89    45 0.303   6.72
 3.00 Prom -  83924  83885   40                              -6.95

 4.03 PlyA -  83940  83935    6                              -0.45
 4.02 Term -  84618  84231  388  2  1   63   35   199 0.611   5.53
 4.01 Init -  85354  85296   59  1  2   66   80   120 0.967   7.83
 4.00 Prom -  93015  92976   40                              -7.25

 5.00 Prom +  97665  97704   40                              -6.95
 5.01 Init + 100001 100111  111  1  0  103   94   103 0.995  10.79
 5.02 Intr + 101392 101878  487  0  1  114   76   485 0.920  41.56
 5.03 Intr + 102387 102527  141  1  0   83   86   162 0.997  14.90
 5.04 Term + 103442 103599  158  0  2   66   35   122 0.813   1.81
 5.05 PlyA + 103880 103885    6                               1.05

 6.05 PlyA - 103915 103910    6                               1.05
 6.04 Term - 119553 119426  128  1  2   82   41   120 0.681   4.16
 6.03 Intr - 120807 120657  151  0  1   31   71    99 0.429   1.31
 6.02 Intr - 132679 132414  266  2  2   94  111   156 0.869  14.81
 6.01 Init - 147824 146771 1054  2  1  103   86   733 0.985  69.00
 6.00 Prom - 149070 149031   40                             -11.04

 7.00 Prom + 152303 152342   40                              -4.15
 7.01 Init + 166455 166883  429  2  0   78   98   307 0.265  25.00
 7.02 Intr + 167169 167289  121  2  1   16   52   167 0.227   5.05
 7.03 Intr + 175156 175198   43  2  1   71   84    24 0.024  -3.32
 7.04 Intr + 183649 183825  177  1  0   85   49   149 0.298   8.81
 7.05 Intr + 190880 190950   71  2  2   75   25   104 0.093   0.71
 7.06 Intr + 196446 196486   41  1  2   81   82    35 0.392  -0.78
 7.07 Intr + 198933 199023   91  2  1   54   84   122 0.936   7.05
 7.08 Term + 199098 199204  107  1  2   44   51   154 0.842   4.89
 7.09 PlyA + 200331 200336    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:185043373_185246968|GENSCAN_predicted_peptide_1|758_aa
MGQVWGLVRSTLELFHTEDEEEPEYSEVTEEVTERVYLPAKAKAAKEGKVHPYPSAPPPH
YFEEKDPPDLSFPEDAGQKAGIQQARQEGDLEAWQFPVRIHPPDQQGNIIATFEPFPFKL
LKEFKQAINQYGPGSPFVMGLLKNVAVSSRMIPTDWDALTRACLTPAQFLQFKTRWADEA
SIQAARNAQAQPQINITAHQLLGVGGWAGLHAQLVMGDDAIEQLRGVCIRAWEKITSSGE
QYPSFSAIKQRPKEPYVDFIARLQKSLKKMIADSAAQDIVLQLLAFDNANPDCQAALRPI
RGKVHLIDYINACDGIGASSASVDLCCTKAVSLLPGEPPQKVPTGVCEPLPVGTIELLLG
RSSIGLKGVQIHTGVIDSDSNGEIQIVVSTSVPWKAEPGGRIAQLLIVPYVGMRKSEIKR
TGGFGSTNKQGKAAYWVNQITDKRATCEITIQGKKFKGLVDTGADISIISLQHWPSAWPI
QPAQFNVAGVGKAAEVYQSSYILHCEGPDGQPGTIQPIITSVPKNLWGRDLLQQWGAQVL
IPEQLYSPHNQHTMHEMGYVPGQKAELVAVIEVLTAFDMPINVISDSSYVVHSTQLIENA
QLRFHTDEQLMTLFIQLQTAVRRQMFSAAEQHLQKPAAKTEAEQLIWWREPITKSWEIGK
MITWGRGYACITPGQNQQLIWIPSRHLEPCHEPDAKEETPGGSRGPPGCSHVKTDAEEDP
TCHEQHPLNTATHLGTDQEAVIDGGRKPEESGTTSHNE

>gi568815594f:185043373_185246968|GENSCAN_predicted_CDS_1|2277_bp
atgggacaggtatggggtctggttcgttccaccttggaactttttcacactgaggacgag
gaggaaccagaatatagcgaagtaacagaagaggttacagagcgtgtttatttaccagct
aaagctaaagcagcaaaggaaggaaaggttcatccctacccttctgcaccccctcctcat
tattttgaagaaaaagaccctccagatctttcttttccagaggacgctgggcaaaaagca
ggaattcagcaagccagacaagagggtgatttagaggcttggcagttccctgttagaata
caccccccagatcaacagggaaatattatagctacttttgagccttttccttttaaatta
ctcaaagaatttaaacaagctataaatcagtatggaccaggttctccttttgtaatggga
ctgttaaagaatgttgctgtttccagtcgaatgattcctactgactgggacgctcttact
cgagcttgtctaactcctgctcagttcttacagtttaaaactcggtgggcagatgaagct
tccattcaggctgctcgcaatgcccaggcccaacctcaaattaatataactgcacaccaa
cttttgggggttggcggctgggctggtttacatgcacaactggtcatgggggatgatgcc
atagaacagcttagaggagtgtgcattagagcttgggaaaaaatcacttcaagtggagaa
caatacccttcctttagtgctataaaacagcgacccaaagaaccatacgttgattttata
gctcggttacagaagtctcttaaaaagatgattgcagattcggctgctcaggatatagtg
ttgcagttattagctttcgacaatgctaatcccgattgccaggctgctctgcgacctatc
agggggaaagtgcatttaattgattatatcaatgcctgtgatggcatcggagccagtagt
gcttcagtagatttatgctgcacaaaagctgtgagccttctgcctggggaacccccgcaa
aaggtcccaacaggagtctgcgaacccttgccagtggggacgatagaattacttttagga
aggtctagtataggtttaaaaggggtacaaatacatacaggagtcattgattcagattcc
aatggggaaattcaaattgttgtatctacttctgttccctggaaagcagagccaggaggg
cgtatagcacagctcctgattgtgccgtatgtgggaatgagaaaaagtgaaattaaacga
acaggaggatttggaagcacaaataaacaaggcaaagcagcttattgggtaaatcaaatt
actgataaacgtgctacctgtgaaataactattcagggaaagaaatttaaaggtttggta
gatacaggagcagacatttcaatcatttctctacagcactggccatctgcgtggccaatt
caacccgctcaatttaatgtggctggagttggtaaagccgctgaagtatatcaaagtagt
tatatcttgcattgtgaagggcctgatggacaacctgggactattcaaccaattataact
tctgtacctaaaaatttatggggaagagatttattacaacaatggggagcacaagttcta
attccagaacaattatatagccctcataatcaacatacgatgcatgaaatggggtatgtc
cctggtcaaaaagcagagcttgtagctgtaattgaggtattgactgcttttgatatgcct
attaatgtgatttctgattcttcatacgtggttcattccacgcagttaattgaaaatgct
cagttacgatttcatacagatgaacaactgatgactttatttatccaattgcaaacagca
gttagaagacagatgttctcagcagctgaacagcatctacagaaaccagctgcaaagaca
gaagcagaacaattgatttggtggagagagccaataacaaaaagttgggaaataggtaaa
atgataacttggggtagaggttatgcttgtattactccaggccaaaatcaacagctgatt
tggataccatcaagacacctggaaccttgtcatgagccagatgccaaggaagagactcca
ggaggatcccgaggaccccctggttgcagccatgtcaagaccgatgctgaggaggacccc
acctgtcacgagcaacacccgttgaacacagccacccacctggggacagatcaagaagct
gtcatagatggcggaagaaaacctgaggaaagcgggacaaccagtcacaatgagtaa

>gi568815594f:185043373_185246968|GENSCAN_predicted_peptide_2|241_aa
MSLRARPQPAFKRKKKATLLHSSPAPVKTSIFSEDQEKTASGTQYGWAGAGPGAVTEGQP
SRVKGEVAQLLQDPGDLTQAHSSAPDKEATKTWQPLMRYFCAWANEGLLQEASDEKPAWL
LFEVWGGEGTQRSLRWKKPYRCASPPCSVPYKGHPSLQTSSPELLCLCVRARFASLPQEY
EGQSSSSCWSHDVTLKAGNSALEELIREDREVSVGGSKEPPSLQLRLRGLRRFIHKATLH
K

>gi568815594f:185043373_185246968|GENSCAN_predicted_CDS_2|726_bp
atgagcctgcgcgcccgaccccagccagcttttaaaaggaagaaaaaagcaaccctcctc
cactcctctccagcccccgtgaagaccagcatcttttcagaagaccaggaaaaaacagcc
tcgggcactcagtacggatgggcaggtgccgggcctggtgctgtcactgaggggcagccc
agcagggttaaaggggaggtggcccagctcctccaggacccgggagacctgacacaggca
cactcaagtgcgccggataaagaggctacaaaaacatggcagcccctaatgagatatttt
tgcgcttgggcgaacgaagggctgcttcaggaggctagtgacgaaaaacctgcctggctt
ttgtttgaagtttggggtggtgagggaactcaaaggtctctgagatggaagaaaccttac
agatgtgcttctccgccctgctcagtaccttacaaaggtcatccctccctgcaaacttca
tcccctgagctcctgtgcctctgcgttcgagctcgatttgccagcctgccacaagaatac
gaaggccagagctccagcagctgttggagccacgatgtgaccctgaaggcaggaaactca
gctttggaagaactgatccgagaggacagggaagtcagtgtgggcggctctaaggagcct
ccctctctacagctgcggctcagaggattacggcgcttcatccacaaggcaacattgcac
aagtag

>gi568815594f:185043373_185246968|GENSCAN_predicted_peptide_3|278_aa
MDAARGHVLSQLAPGTENQILHVLTYGNNEHLGAKSGKRGRGPTAEKRPIGYHVHYLVNG
FNKSPNLSIMRYTQANHLHGAPWLLQAIYAPLSQGCEAGRSLKKGSAGRTGSLVTLLLMF
RLIDMGSRVAEGSGTHVKEPTRRKMFRLTDMGSRALCYPGPGTASAYVWGTGPKTALEFS
YSLEGLTELTESCDTHSYGLLQGKLPADLHAQTGAVHRLQQEKGLLACGNHLLQHSRDTM
VNRQMMKSSPGDDWCLVPSCTKPVFMEFTREVETKDRQ

>gi568815594f:185043373_185246968|GENSCAN_predicted_CDS_3|837_bp
atggatgcagctagaggccatgtcctaagccaattagcaccaggaacagaaaaccagatc
ctgcatgttctcacttatgggaacaatgagcacttgggcgccaaaagtggcaagcggggg
agggggccaacagctgaaaaacgacctatcgggtaccatgttcactatttggttaatggg
ttcaataaaagcccaaacctcagcatcatgcgatatacccaggccaatcatctccatggg
gccccgtggctgctacaagccatttacgccccgctgagtcagggctgtgaagctgggaga
tctctgaagaagggttcagctggcaggacaggctctctagtgactctcctactgatgttc
agactcattgacatgggttccagggtagcagagggctctggaacccatgtcaaggagcct
acccgcaggaagatgttcaggctcactgacatgggttccagagccctctgctatcctggt
cctggcaccgcctcagcatatgtttgggggaccggtcccaaaaccgcccttgagttcagt
tattcactagagggactcacagagctcactgagagctgtgatactcacagttatggttta
ttacagggaaagctccctgcagacttgcatgctcagacgggagctgtccaccgcctgcaa
caggaaaagggcttgcttgcgtgtggtaaccaccttcttcaacattctagggatacaatg
gtgaacaggcaaatgatgaagtcaagtcctggagatgactggtgtttagtccctagttgc
actaaacctgttttcatggagtttacacgagaagtggagacaaaagacagacaataa

>gi568815594f:185043373_185246968|GENSCAN_predicted_peptide_4|148_aa
MRGVRRGPGAEGQAGLATPSTHPGHRTPVLSRGSSKPWFSPDREFRSVRAPFRPPAPSVP
PQGPEAALGAQRIPRRLEPQPRRFVAAVQETAGEGARGAETACRGLCSPGASFGLAEPDS
QPALTTAQRLARWVSEPPTLKDTDLART

>gi568815594f:185043373_185246968|GENSCAN_predicted_CDS_4|447_bp
atgcgcggggtgcgtcggggtcccggcgccgagggccaggcggggctggcgacacccagc
acacatcccggacacagaacgcccgtactttcccgagggtcttccaagccctggttcagc
ccggaccgtgagttccggagcgtccgcgcccccttccgccctcccgcaccctcagtcccg
cctcagggccccgaagccgccctgggcgcgcagcgcatccccaggcgactggagccccag
ccccgacgcttcgtcgccgcagtccaggagaccgcaggagaaggggctcgtggggcggag
acagcctgccggggcctctgcagcccgggagcctcctttggactcgccgaacccgactcc
caacccgcccttaccactgcccagaggctcgcgcgctgggtttctgagcctcccaccctg
aaggacaccgatctcgcccggacataa

>gi568815594f:185043373_185246968|GENSCAN_predicted_peptide_5|298_aa
MGDHAWSFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR
IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQLFLGGVDRHKQFWRYFAGNLASG
GAAGATSLCFVYPLDFARTRLAADVGKGAAQREFHGLGDCIIKIFKSDGLRGLYQGFNVS
VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIFVSWMIAQSVTAVAGLVSYPFDTVRRRMMM
QSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV

>gi568815594f:185043373_185246968|GENSCAN_predicted_CDS_5|897_bp
atgggtgatcacgcttggagcttcctaaaggacttcctggccgggggcgtcgccgctgcc
gtctccaagaccgcggtcgcccccatcgagagggtcaaactgctgctgcaggtccagcat
gccagcaaacagatcagtgctgagaagcagtacaaagggatcattgattgtgtggtgaga
atccctaaggagcagggcttcctctccttctggaggggtaacctggccaacgtgatccgt
tacttccccacccaagctctcaacttcgccttcaaggacaagtacaagcagctcttctta
gggggtgtggatcggcataagcagttctggcgctactttgctggtaacctggcgtccggt
ggggccgctggggccacctccctttgctttgtctacccgctggactttgctaggaccagg
ttggctgctgatgtgggcaagggcgccgcccagcgtgagttccatggtctgggcgactgt
atcatcaagatcttcaagtctgatggcctgagggggctctaccagggtttcaacgtctct
gtccaaggcatcattatctatagagctgcctacttcggagtctatgatactgccaagggg
atgctgcctgaccccaagaacgtgcacatttttgtgagctggatgattgcccagagtgtg
acggcagtcgcagggctggtgtcctacccctttgacactgttcgtcgtagaatgatgatg
cagtccggccggaaaggggccgatattatgtacacggggacagttgactgctggaggaag
attgcaaaagacgaaggagccaaggccttcttcaaaggtgcctggtccaatgtgctgaga
ggcatgggcggtgcttttgtattggtgttgtatgatgagatcaaaaaatatgtctaa

>gi568815594f:185043373_185246968|GENSCAN_predicted_peptide_6|532_aa
MDQFGDILEGEVDHSFFDSDFEEGKKCETNSVFDKQNDDPKERIDKDTKNVNSNTGMQTT
ENYLTEKGNERNVKFPPEHPVENDVTQTVSSFSLPASSRSKKLCDVTTGLKIHVSIPNRI
PKIVKEGEDDYYTDGEESSDDGKKYHVKSKSAKPSTNVKKSIRKKYCKVSSSSSSSLSSS
SSGSGTDCLDAGSDSHLSDSSPSSKSSKKHVSGITLLSPKHKYKSGIKSTETQPSSTTPK
CGHYPEESEDTVTDVSPLSTPDISPLQSFELGIANDQKVKIKKQENVSQEIYEDVEDLKN
NSKYLKAAKKGKEKHEPDVSSKSSSVLDSSLDHRHKQKVLHDTMDLNHLLKAFLQLDKKG
PQKHHFDQPSVAPGKNYSFTREEVRQIDRENQRLLKELSRQAEKPGSKSTIPRSADHPPK
LYHSALNRQKEQQRIERENLALLKRLEAVKPTVGMKRSEQLMDYHRNMGYLNSSPLSRRA
RSTLGQYSPLRASRTSSATSGLSCRSERSAVDPSSGHPRRRPKPPNVRTAWL

>gi568815594f:185043373_185246968|GENSCAN_predicted_CDS_6|1599_bp
atggatcagtttggagatatattagaaggtgaagtggaccattctttctttgacagtgac
tttgaagaaggaaagaaatgtgaaactaactcagtttttgacaagcaaaatgatgaccca
aaggaaagaatagataaagatacaaaaaatgtaaattcgaacactggaatgcaaacaaca
gaaaattatcttactgagaagggaaatgaaagaaacgtgaaatttcccccagaacacccc
gtagagaatgatgttacacaaactgtaagttctttctcattgccagcctcttcaagatca
aaaaaattgtgtgatgttacaacaggacttaaaatacacgtgtccattccaaatagaatt
cccaaaattgtaaaagaaggtgaagatgattactacacagatggagaggaaagcagtgat
gatgggaagaaataccatgtgaagtccaagtccgctaaaccatctactaacgttaaaaaa
agcataaggaaaaagtattgcaaagttagctcctcttcctcctcctctttatcttcctca
tcttcaggttcaggtacagattgtttagatgcagggtctgatagccatctatctgattcg
tctccgtcatctaagtcatctaagaaacatgtatctggtataaccctcctgtcaccaaaa
cacaagtataaatcaggaataaaatcgacagaaacacagccttcaagtactacaccaaaa
tgtggccactaccctgaggagtctgaagatactgtgactgacgtaagtcccttatcaact
ccagacattagccctcttcagtcttttgaactgggcatagcaaatgatcaaaaagtgaaa
attaaaaagcaagaaaatgtgagccaagaaatatatgaagatgttgaggatttgaaaaat
aattcaaaatatttgaaagcagccaaaaaagggaaagaaaaacatgagcctgatgtctcc
tcaaagtcgtcttcagtgttagactccagtttagaccacagacataaacagaaagtctta
catgacacaatggatctgaatcatctcttgaaagcttttctgcaattagataaaaaagga
ccacaaaaacatcactttgatcagccttcagtagcacccgggaaaaactactctttcaca
agagaagaggtgagacagatcgatcgggaaaatcagaggcttttgaaagaactgtcaaga
caggcggaaaagccgggaagcaaaagtacaattcctagatcggctgatcatcccccaaag
ttatatcacagtgctctcaacagacagaaggaacaacaaaggattgagagagaaaacttg
gctttattgaaaaggcttgaggccgtgaaaccaacagttggtatgaaacgttcagaacaa
ctgatggactatcatcgcaatatgggctatctcaactcatcaccattgtcaagacgggcc
agatccactcttggccaatatagcccattaagagcttccaggacatccagtgctacgagt
ggtctcagttgtaggagtgagcgatcagcggttgacccctccagtggccaccctcgaaga
agacctaaaccccctaatgtccgtacagcttggttataa

>gi568815594f:185043373_185246968|GENSCAN_predicted_peptide_7|359_aa
MHPDATDSGGAGPSPARAAGAGGRPVSGFRGERRPESPGDAEAAAAAAPGAPGGRSWWKP
VAVAALAAVALSFLGPGSGEAAGAAGLSSVLFRLSLYLSCAAAAFLLGILFALVCRSPRA
QPPDFAAAWSRLAATSAARRPPGGVPRPSVSLAVGGEEGNHSVRYVQALRTVLAIRLVLL
AVLASQHSAATLGTCQSCPVSRKSLRAVDQVTVSVLGTTATQDDTQKKKVPFWSKENVLR
NASGSVPLTSYWPGLGRKQVIHQETLRKEPAMKVKYDGMREGDLAGSQDNSGGKHRLPGD
SVRAHRLSEAQSPRALNPPPPTSVFNLLEQLTELRETLTYIYWFIVEDIAKDADEEMLR

>gi568815594f:185043373_185246968|GENSCAN_predicted_CDS_7|1080_bp
atgcaccccgatgcgaccgacagtggcggcgccggccccagccccgcgcgggccgcaggc
gccggcggccgtcctgtctcgggcttcaggggcgagcggcggccggagtccccgggggac
gcggaggcagcagcagcggcggcgccgggggccccgggcggccggagctggtggaagccc
gtggcggtggccgcactcgccgccgtggccctctccttcctggggcccggcagcggggag
gcggcgggggccgcggggctgagctccgtcctgttcaggctcagcctgtacctgagctgc
gcggcggccgccttcctgctggggatcctgtttgccctcgtctgccggagcccgcgcgcc
cagccgcccgacttcgccgccgcctggagccggctggccgcgacctcagccgcccgccgc
ccgccggggggtgtccccagaccttcggtgtcgcttgccgtgggaggggaagaagggaat
cacagcgttcgctacgtgcaggctctgcgcacggtcctggcgatccgcttggttcttctg
gccgttctcgctagccagcactcagcagccactctaggcacttgccagtcctgccccgtg
agtcggaagagcttgcgggctgttgaccaggtgactgtatcagttttaggcaccacagcc
acgcaggatgatacccagaagaagaaagtccctttttggagcaaggaaaatgtgctcaga
aatgcttctggcagtgttcccctcacatcttactggccaggtttgggcagaaagcaggtt
attcaccaggaaacattacgaaaggaacctgctatgaaagtaaaatatgacggcatgaga
gagggggatttggcagggtcacaggacaatagtggagggaagcatcgtctacctggagac
agtgtcagagcccatagattaagtgaagctcagtccccaagagccctcaaccccccaccc
ccaacgtcagtctttaatttgctggagcagctcacagaactcagggaaacgcttacttac
atttactggtttattgtagaagatattgcaaaggatgcagatgaagaaatgctacggtga